RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 DALRD3Q5D0E6 543 aaKnown RBP5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 KLHL10Q6JEL2 608 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 PDXDC2PQ6P474 469 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZNF449Q6P9G9 518 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 PTF1AQ7RTS3 328 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 IQCF2Q8IXL9 164 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 SAMD14Q8IZD0 417 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 MICALL1Q8N3F8 863 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 MARCH10Q8NA82 808 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 TTC8Q8TAM2 541 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 SP7Q8TDD2 431 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 SERINC2Q96SA4 455 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 SH3GLB2Q9NR46 395 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 SNTG2Q9NY99 539 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 CNTN3Q9P232 1028 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 IKBKGQ9Y6K9 419 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 MYBBP1AQ9BQG0 1328 aaKnown RBP5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 FAM221BA6H8Z2 402 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 PIK3CDO00329 1044 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 RHOBTB3O94955 611 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 TNFAIP3P21580 790 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 NEK3P51956 506 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 FAM133BQ5BKY9 247 aaKnown RBP5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 CCDC158Q5M9N0 1113 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 HYIQ5T013 277 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 RC3H1Q5TC82 1133 aaKnown RBP5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 IL31Q6EBC2 164 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 IQCEQ6IPM2 695 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 EP400NLQ6ZTU2 488 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 RIC3Q7Z5B4 369 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 RASSF3Q86WH2 238 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 PLPP6Q8IY26 295 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 ARL6IP6Q8N6S5 226 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 APPL2Q8NEU8 664 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 APPBP2Q92624 585 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 MAP3K14Q99558 947 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZIM2Q9NZV7 527 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 GTPBP10A4D1E9 387 aaKnown RBP5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 KCNQ2O43526 872 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 SNX2O60749 519 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 RAB27AP51159 221 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 ARHGAP4P98171 946 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 MECOMQ03112 1051 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 DCTN1Q14203 1278 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 KIF24Q5T7B8 1368 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 ANKRD45Q5TZF3 282 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 CFAP161Q6P656 301 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 METTL3Q86U44 580 aaKnown RBP5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 VPS37DQ86XT2 251 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 DEPDC4Q8N2C3 294 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZNF713Q8N859 430 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 ARL10Q8N8L6 244 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 TRIM6Q9C030 488 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZNF700Q9H0M5 742 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 RABL2AQ9UBK7 228 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 NUDCQ9Y266 331 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 IGSF1Q8N6C5 1336 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 C19orf81C9J6K1 198 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 PRKAR2BP31323 418 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 ECM1Q16610 540 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 DZIP3Q86Y13 1208 aaKnown RBP5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 SCLT1Q96NL6 688 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 COMMD8Q9NX08 183 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 SUN2Q9UH99 717 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 BRWD3Q6RI45 1802 aa5.87□□□□□ -1.47
TRAPPC11-208ENST00000511955 CYP27B1O15528 508 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 INMTO95050 263 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 AGR2O95994 175 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 NCAM1P13591 858 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 ABCD1P33897 745 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 HALP42357 657 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 MAPK8P45983 427 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 TRPC1P48995 793 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 MCL1Q07820 350 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 WDR43Q15061 677 aaKnown RBP eCLIP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 PUM3Q15397 648 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 TKFCQ3LXA3 575 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 PPP4R3AQ6IN85 833 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZNF530Q6P9A1 599 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 DEFB132Q7Z7B7 95 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 KIAA0907Q7Z7F0 614 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 OR8H2Q8N162 312 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 SH3KBP1Q96B97 665 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 PHACTR3Q96KR7 559 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 TBK1Q9UHD2 729 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 DDX41Q9UJV9 622 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 NOB1Q9ULX3 412 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 MAGED1Q9Y5V3 778 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 ABCC6O95255 1503 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L3A6NCW0 530 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L4A6NCW7 530 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 CHL1O00533 1208 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 C21orf2O43822 256 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 TPPPO94811 219 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 LDHBP07195 334 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 GLULP15104 373 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 SARSP49591 514 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 SFSWAPQ12872 951 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 SLMAPQ14BN4 828 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 WDR45BQ5MNZ6 344 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms