RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 CTU1Q7Z7A3 348 aaKnown RBP14.09□□□□□ -0.15
SH3RF1-205ENST00000511421 PICK1Q9NRD5 415 aa14.09□□□□□ -0.15
SH3RF1-205ENST00000511421 ECHDC1Q9NTX5 307 aa14.09□□□□□ -0.15
SH3RF1-205ENST00000511421 HERC5Q9UII4 1024 aaKnown RBP14.09□□□□□ -0.15
SH3RF1-205ENST00000511421 ZHX2Q9Y6X8 837 aa14.09□□□□□ -0.15
SH3RF1-205ENST00000511421 CXCL11O14625 94 aa14.08□□□□□ -0.16
SH3RF1-205ENST00000511421 FOXP4Q8IVH2 680 aaPredicted RBP14.08□□□□□ -0.16
SH3RF1-205ENST00000511421 DNAJC18Q9H819 358 aa14.08□□□□□ -0.16
SH3RF1-205ENST00000511421 ZCCHC17Q9NP64 241 aaKnown RBP14.08□□□□□ -0.16
SH3RF1-205ENST00000511421 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.08□□□□□ -0.16
SH3RF1-205ENST00000511421 SAP30BPQ9UHR5 308 aaKnown RBP14.08□□□□□ -0.16
SH3RF1-205ENST00000511421 AFG3L2Q9Y4W6 797 aa14.08□□□□□ -0.16
SH3RF1-205ENST00000511421 CDK5RAP2Q96SN8 1893 aa14.08□□□□□ -0.16
SH3RF1-205ENST00000511421 MAGEB6P1A0A0J9YX57 407 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 ADD2P35612 726 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 CAP2P40123 477 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 HDAC1Q13547 482 aaPredicted RBP14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 TAF1CQ15572 869 aaPredicted RBP14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 SLFNL1Q499Z3 407 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 ZFYVE28Q9HCC9 887 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 SIPA1L1O43166 1804 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 FOCADQ5VW36 1801 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 CHGBP05060 677 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 USP5P45974 858 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 AAMPQ13685 434 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 TSHZ3Q63HK5 1081 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 ANKRD23Q86SG2 305 aa14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 CCDC84Q86UT8 332 aaPredicted RBP14.07□□□□□ -0.16
SH3RF1-205ENST00000511421 A0A0G2JLL6 359 aaPredicted RBP14.06□□□□□ -0.16
SH3RF1-205ENST00000511421 GPAT2Q6NUI2 795 aa14.06□□□□□ -0.16
SH3RF1-205ENST00000511421 PRRT2Q7Z6L0 340 aaPredicted RBP14.06□□□□□ -0.16
SH3RF1-205ENST00000511421 LCORLQ8N3X6 602 aa14.06□□□□□ -0.16
SH3RF1-205ENST00000511421 OTUD7AQ8TE49 926 aaPredicted RBP14.06□□□□□ -0.16
SH3RF1-205ENST00000511421 HLA-DOAP06340 250 aa14.05□□□□□ -0.16
SH3RF1-205ENST00000511421 JAG1P78504 1218 aa14.05□□□□□ -0.16
SH3RF1-205ENST00000511421 CAP1Q01518 475 aa14.05□□□□□ -0.16
SH3RF1-205ENST00000511421 UBE3CQ15386 1083 aa14.05□□□□□ -0.16
SH3RF1-205ENST00000511421 SLC4A8Q2Y0W8 1093 aa14.05□□□□□ -0.16
SH3RF1-205ENST00000511421 GPATCH3Q96I76 525 aa14.05□□□□□ -0.16
SH3RF1-205ENST00000511421 CRNKL1Q9BZJ0 848 aaKnown RBP14.05□□□□□ -0.16
SH3RF1-205ENST00000511421 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.05□□□□□ -0.16
SH3RF1-205ENST00000511421 DOCK1Q14185 1865 aa14.05□□□□□ -0.16
SH3RF1-205ENST00000511421 PDHXO00330 501 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 TLR2O60603 784 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 SP3Q02447 781 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 PKN2Q16513 984 aaKnown RBP14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 CRACR2BQ8N4Y2 399 aaPredicted RBP14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 EXOC6Q8TAG9 804 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 GCC1Q96CN9 775 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 EHD4Q9H223 541 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 ARMT1Q9H993 441 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 SUPT16HQ9Y5B9 1047 aaKnown RBP14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 TTC41PQ6P2S7 1318 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 SALL3Q9BXA9 1300 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 TRIM75PA6NK02 468 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 PLCD1P51178 756 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 KBTBD3Q8NAB2 608 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 PI4K2BQ8TCG2 481 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 CD99L2Q8TCZ2 262 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 SDR42E1Q8WUS8 393 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 ERO1AQ96HE7 468 aa14.04□□□□□ -0.16
SH3RF1-205ENST00000511421 PHIPQ8WWQ0 1821 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 USP17L5A8MUK1 530 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 PRKAB2O43741 272 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 MBD4O95243 580 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 SPP2Q13103 211 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 SHROOM1Q2M3G4 852 aaPredicted RBP14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 ANKRD45Q5TZF3 282 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 ZSCAN25Q6NSZ9 544 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 TATDN1Q6P1N9 297 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 FASTKD5Q7L8L6 764 aaKnown RBP14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 OTOP1Q7RTM1 612 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 TTC6Q86TZ1 520 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 ZNF280CQ8ND82 737 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 TRIM34Q9BYJ4 488 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 TBC1D2Q9BYX2 928 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 DCP1AQ9NPI6 582 aaPredicted RBP14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 ADGRA2Q96PE1 1338 aa14.03□□□□□ -0.16
SH3RF1-205ENST00000511421 CCDC85CA6NKD9 419 aa14.02□□□□□ -0.16
SH3RF1-205ENST00000511421 GDF11O95390 407 aa14.02□□□□□ -0.16
SH3RF1-205ENST00000511421 ASNSP08243 561 aa14.02□□□□□ -0.16
SH3RF1-205ENST00000511421 C17orf99Q6UX52 265 aa14.02□□□□□ -0.16
SH3RF1-205ENST00000511421 PUS7LQ9H0K6 701 aaKnown RBP14.02□□□□□ -0.16
SH3RF1-205ENST00000511421 GINM1Q9NU53 330 aa14.02□□□□□ -0.16
SH3RF1-205ENST00000511421 MCM9Q9NXL9 1143 aa14.02□□□□□ -0.16
SH3RF1-205ENST00000511421 SERPINB13Q9UIV8 391 aa14.02□□□□□ -0.16
SH3RF1-205ENST00000511421 TRIM17Q9Y577 477 aa14.02□□□□□ -0.16
SH3RF1-205ENST00000511421 MYH1P12882 1939 aa14.02□□□□□ -0.16
SH3RF1-205ENST00000511421 ERC2O15083 957 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 GLRX3O76003 335 aaKnown RBP14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 MX1P20591 662 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 EVX2Q03828 476 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 GABPAQ06546 454 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 FBXO46Q6PJ61 603 aaPredicted RBP14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 GADL1Q6ZQY3 521 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 WDR18Q9BV38 432 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 ZBTB21Q9ULJ3 1066 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 HPS5Q9UPZ3 1129 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 SLC45A1Q9Y2W3 748 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 POLR3DP05423 398 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms