RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 RAB11FIP3O75154 756 aa25.89■■□□□ 1.74
LIN54-208ENST00000509748 IDH1O75874 414 aaKnown RBP25.89■■□□□ 1.74
LIN54-208ENST00000509748 C17orf99Q6UX52 265 aa25.89■■□□□ 1.74
LIN54-208ENST00000509748 PRRT2Q7Z6L0 340 aaPredicted RBP25.89■■□□□ 1.74
LIN54-208ENST00000509748 MAPKAPK5Q8IW41 473 aa25.89■■□□□ 1.74
LIN54-208ENST00000509748 CLASRPQ8N2M8 674 aaKnown RBP25.89■■□□□ 1.74
LIN54-208ENST00000509748 CCDC84Q86UT8 332 aaPredicted RBP25.88■■□□□ 1.73
LIN54-208ENST00000509748 TNRC18O15417 2968 aaPredicted RBP25.88■■□□□ 1.73
LIN54-208ENST00000509748 FLT1P17948 1338 aa25.88■■□□□ 1.73
LIN54-208ENST00000509748 METTL16Q86W50 562 aaKnown RBP25.87■■□□□ 1.73
LIN54-208ENST00000509748 MAGEB6Q8N7X4 407 aa25.87■■□□□ 1.73
LIN54-208ENST00000509748 DHX36Q9H2U1 1008 aaKnown RBP25.87■■□□□ 1.73
LIN54-208ENST00000509748 PI4KBQ9UBF8 816 aa25.87■■□□□ 1.73
LIN54-208ENST00000509748 ZSWIM8A7E2V4 1837 aa25.86■■□□□ 1.73
LIN54-208ENST00000509748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.86■■□□□ 1.73
LIN54-208ENST00000509748 ARHGAP39Q9C0H5 1083 aa25.86■■□□□ 1.73
LIN54-208ENST00000509748 HERC5Q9UII4 1024 aaKnown RBP25.86■■□□□ 1.73
LIN54-208ENST00000509748 CENPFP49454 3210 aa25.85■■□□□ 1.73
LIN54-208ENST00000509748 CAP2P40123 477 aa25.85■■□□□ 1.73
LIN54-208ENST00000509748 LACTBP83111 547 aaPredicted RBP25.85■■□□□ 1.73
LIN54-208ENST00000509748 MIGA1Q8NAN2 632 aa25.85■■□□□ 1.73
LIN54-208ENST00000509748 DNAJC18Q9H819 358 aa25.85■■□□□ 1.73
LIN54-208ENST00000509748 CPA4Q9UI42 421 aa25.85■■□□□ 1.73
LIN54-208ENST00000509748 PALD1Q9ULE6 856 aa25.85■■□□□ 1.73
LIN54-208ENST00000509748 ATAD5Q96QE3 1844 aa25.84■■□□□ 1.73
LIN54-208ENST00000509748 IFIT2P09913 472 aaKnown RBP25.84■■□□□ 1.73
LIN54-208ENST00000509748 MAP3K12Q12852 859 aa25.84■■□□□ 1.73
LIN54-208ENST00000509748 TMED8Q6PL24 325 aaPredicted RBP25.84■■□□□ 1.73
LIN54-208ENST00000509748 FASTKD5Q7L8L6 764 aaKnown RBP25.84■■□□□ 1.73
LIN54-208ENST00000509748 CTGFP29279 349 aa25.83■■□□□ 1.73
LIN54-208ENST00000509748 FOXP4Q8IVH2 680 aaPredicted RBP25.83■■□□□ 1.73
LIN54-208ENST00000509748 KIAA0100Q14667 2235 aaKnown RBP25.82■■□□□ 1.72
LIN54-208ENST00000509748 TRIM75PA6NK02 468 aa25.82■■□□□ 1.72
LIN54-208ENST00000509748 CYP2C8P10632 490 aa25.82■■□□□ 1.72
LIN54-208ENST00000509748 JAG1P78504 1218 aa25.82■■□□□ 1.72
LIN54-208ENST00000509748 ARMC5Q96C12 935 aa25.82■■□□□ 1.72
LIN54-208ENST00000509748 RIOK1Q9BRS2 568 aaKnown RBP25.82■■□□□ 1.72
LIN54-208ENST00000509748 SAP30BPQ9UHR5 308 aaKnown RBP25.82■■□□□ 1.72
LIN54-208ENST00000509748 BCRP11274 1271 aa25.81■■□□□ 1.72
LIN54-208ENST00000509748 ARHGEF6Q15052 776 aa25.81■■□□□ 1.72
LIN54-208ENST00000509748 TTF1Q15361 905 aaPredicted RBP25.81■■□□□ 1.72
LIN54-208ENST00000509748 GADL1Q6ZQY3 521 aa25.81■■□□□ 1.72
LIN54-208ENST00000509748 SLC45A1Q9Y2W3 748 aa25.81■■□□□ 1.72
LIN54-208ENST00000509748 MYH1P12882 1939 aa25.8■■□□□ 1.72
LIN54-208ENST00000509748 PDE6AP16499 860 aa25.8■■□□□ 1.72
LIN54-208ENST00000509748 SPP2Q13103 211 aa25.8■■□□□ 1.72
LIN54-208ENST00000509748 CERS3Q8IU89 383 aa25.8■■□□□ 1.72
LIN54-208ENST00000509748 EDC3Q96F86 508 aaKnown RBP25.8■■□□□ 1.72
LIN54-208ENST00000509748 PARK7Q99497 189 aaKnown RBP25.8■■□□□ 1.72
LIN54-208ENST00000509748 PTCH2Q9Y6C5 1203 aa25.8■■□□□ 1.72
LIN54-208ENST00000509748 PDE4DIPQ5VU43 2346 aa25.8■■□□□ 1.72
LIN54-208ENST00000509748 GOLIM4O00461 696 aa25.79■■□□□ 1.72
LIN54-208ENST00000509748 ATP5JP18859 108 aa25.79■■□□□ 1.72
LIN54-208ENST00000509748 ZNF280CQ8ND82 737 aa25.79■■□□□ 1.72
LIN54-208ENST00000509748 BCL11AQ9H165 835 aa25.79■■□□□ 1.72
LIN54-208ENST00000509748 TCRBV5S4A2TA0A5A2 114 aa25.78■■□□□ 1.72
LIN54-208ENST00000509748 USP17L5A8MUK1 530 aa25.78■■□□□ 1.72
LIN54-208ENST00000509748 KIF22Q14807 665 aa25.78■■□□□ 1.72
LIN54-208ENST00000509748 SHROOM1Q2M3G4 852 aaPredicted RBP25.78■■□□□ 1.72
LIN54-208ENST00000509748 SLC9C2Q5TAH2 1124 aa25.78■■□□□ 1.72
LIN54-208ENST00000509748 TRIM47Q96LD4 638 aa25.78■■□□□ 1.72
LIN54-208ENST00000509748 DNAJC2Q99543 621 aaKnown RBP25.78■■□□□ 1.72
LIN54-208ENST00000509748 TBC1D2Q9BYX2 928 aa25.78■■□□□ 1.72
LIN54-208ENST00000509748 SMARCA5O60264 1052 aaPredicted RBP25.77■■□□□ 1.72
LIN54-208ENST00000509748 TREML2Q5T2D2 321 aa25.77■■□□□ 1.72
LIN54-208ENST00000509748 LRRCC1Q9C099 1032 aa25.77■■□□□ 1.72
LIN54-208ENST00000509748 BOLA2Q9H3K6 86 aa25.77■■□□□ 1.72
LIN54-208ENST00000509748 DCTPP1Q9H773 170 aa25.77■■□□□ 1.72
LIN54-208ENST00000509748 AGTPBP1Q9UPW5 1226 aa25.77■■□□□ 1.72
LIN54-208ENST00000509748 GNRH1P01148 92 aa25.76■■□□□ 1.71
LIN54-208ENST00000509748 PSMC4P43686 418 aa25.76■■□□□ 1.71
LIN54-208ENST00000509748 USP5P45974 858 aa25.76■■□□□ 1.71
LIN54-208ENST00000509748 SLC4A8Q2Y0W8 1093 aa25.76■■□□□ 1.71
LIN54-208ENST00000509748 PROCA1Q8NCQ7 364 aaPredicted RBP25.76■■□□□ 1.71
LIN54-208ENST00000509748 WDR18Q9BV38 432 aa25.76■■□□□ 1.71
LIN54-208ENST00000509748 ZNF532Q9HCE3 1301 aa25.76■■□□□ 1.71
LIN54-208ENST00000509748 LOC285556D6RIA3 1793 aa25.76■■□□□ 1.71
LIN54-208ENST00000509748 MAGEB6P1A0A0J9YX57 407 aa25.75■■□□□ 1.71
LIN54-208ENST00000509748 ECM2O94769 699 aaPredicted RBP25.75■■□□□ 1.71
LIN54-208ENST00000509748 HLA-DOAP06340 250 aa25.75■■□□□ 1.71
LIN54-208ENST00000509748 SH3D19Q5HYK7 790 aa25.75■■□□□ 1.71
LIN54-208ENST00000509748 CRACR2BQ8N4Y2 399 aaPredicted RBP25.75■■□□□ 1.71
LIN54-208ENST00000509748 ZNF333Q96JL9 665 aa25.75■■□□□ 1.71
LIN54-208ENST00000509748 HAUS7Q99871 368 aa25.75■■□□□ 1.71
LIN54-208ENST00000509748 PAG1Q9NWQ8 432 aa25.75■■□□□ 1.71
LIN54-208ENST00000509748 POTEFA5A3E0 1075 aa25.74■■□□□ 1.71
LIN54-208ENST00000509748 ASNSP08243 561 aa25.74■■□□□ 1.71
LIN54-208ENST00000509748 HMGCS2P54868 508 aa25.74■■□□□ 1.71
LIN54-208ENST00000509748 GDF11O95390 407 aa25.73■■□□□ 1.71
LIN54-208ENST00000509748 PRMT2P55345 433 aa25.73■■□□□ 1.71
LIN54-208ENST00000509748 SLFNL1Q499Z3 407 aa25.73■■□□□ 1.71
LIN54-208ENST00000509748 TATDN1Q6P1N9 297 aa25.73■■□□□ 1.71
LIN54-208ENST00000509748 EHD4Q9H223 541 aa25.73■■□□□ 1.71
LIN54-208ENST00000509748 GINM1Q9NU53 330 aa25.73■■□□□ 1.71
LIN54-208ENST00000509748 SRRDQ9UH36 339 aa25.73■■□□□ 1.71
LIN54-208ENST00000509748 PCDHB15Q9Y5E8 787 aa25.73■■□□□ 1.71
LIN54-208ENST00000509748 DDX60LQ5H9U9 1706 aaKnown RBP25.73■■□□□ 1.71
LIN54-208ENST00000509748 MGAMO43451 1857 aa25.72■■□□□ 1.71
LIN54-208ENST00000509748 RBBP6Q7Z6E9 1792 aaKnown RBP25.72■■□□□ 1.71
LIN54-208ENST00000509748 OSBPP22059 807 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 245.6 ms