RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 TRPA1O75762 1119 aa16.4■□□□□ 0.22
PDCD6-204ENST00000506909 PPATQ06203 517 aa16.4■□□□□ 0.22
PDCD6-204ENST00000506909 TSHZ3Q63HK5 1081 aa16.4■□□□□ 0.22
PDCD6-204ENST00000506909 FOXP4Q8IVH2 680 aaPredicted RBP16.4■□□□□ 0.22
PDCD6-204ENST00000506909 KBTBD3Q8NAB2 608 aa16.4■□□□□ 0.22
PDCD6-204ENST00000506909 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
PDCD6-204ENST00000506909 MS4A4AQ96JQ5 239 aa16.4■□□□□ 0.22
PDCD6-204ENST00000506909 MYH8P13535 1937 aa16.39■□□□□ 0.21
PDCD6-204ENST00000506909 CTNND1O60716 968 aaKnown RBP16.39■□□□□ 0.21
PDCD6-204ENST00000506909 ALDH1A1P00352 501 aa16.39■□□□□ 0.21
PDCD6-204ENST00000506909 USP5P45974 858 aa16.39■□□□□ 0.21
PDCD6-204ENST00000506909 GTF2A2P52657 109 aa16.39■□□□□ 0.21
PDCD6-204ENST00000506909 IRX6P78412 446 aaPredicted RBP16.39■□□□□ 0.21
PDCD6-204ENST00000506909 PPIL2Q13356 520 aa16.39■□□□□ 0.21
PDCD6-204ENST00000506909 METTL16Q86W50 562 aaKnown RBP16.39■□□□□ 0.21
PDCD6-204ENST00000506909 IFNL1Q8IU54 200 aa16.39■□□□□ 0.21
PDCD6-204ENST00000506909 OTUD5Q96G74 571 aa16.39■□□□□ 0.21
PDCD6-204ENST00000506909 CRNKL1Q9BZJ0 848 aaKnown RBP16.39■□□□□ 0.21
PDCD6-204ENST00000506909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.39■□□□□ 0.21
PDCD6-204ENST00000506909 STAP2Q9UGK3 403 aa16.39■□□□□ 0.21
PDCD6-204ENST00000506909 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
PDCD6-204ENST00000506909 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
PDCD6-204ENST00000506909 IRF6O14896 467 aa16.38■□□□□ 0.21
PDCD6-204ENST00000506909 SLURP2P0DP57 97 aa16.38■□□□□ 0.21
PDCD6-204ENST00000506909 SCYL3Q8IZE3 742 aa16.38■□□□□ 0.21
PDCD6-204ENST00000506909 CFHR5Q9BXR6 569 aa16.38■□□□□ 0.21
PDCD6-204ENST00000506909 HLA-DOAP06340 250 aa16.37■□□□□ 0.21
PDCD6-204ENST00000506909 PDE1AP54750 535 aa16.37■□□□□ 0.21
PDCD6-204ENST00000506909 NUCB1Q02818 461 aa16.37■□□□□ 0.21
PDCD6-204ENST00000506909 SLFNL1Q499Z3 407 aa16.37■□□□□ 0.21
PDCD6-204ENST00000506909 OTUD7BQ6GQQ9 843 aa16.37■□□□□ 0.21
PDCD6-204ENST00000506909 FAM196BA6NMK8 535 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 IGF2BP3O00425 579 aaKnown RBP eCLIP16.36■□□□□ 0.21
PDCD6-204ENST00000506909 ZFYP08048 801 aaPredicted RBP16.36■□□□□ 0.21
PDCD6-204ENST00000506909 CETPP11597 493 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 SNAPC2Q13487 334 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 LRRFIP1Q32MZ4 808 aaKnown RBP16.36■□□□□ 0.21
PDCD6-204ENST00000506909 NOM1Q5C9Z4 860 aaKnown RBP16.36■□□□□ 0.21
PDCD6-204ENST00000506909 B4GALNT3Q6L9W6 998 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 TTC6Q86TZ1 520 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 CHD1LQ86WJ1 897 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 LCORLQ8N3X6 602 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 PTPN18Q99952 460 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 ARMT1Q9H993 441 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
PDCD6-204ENST00000506909 KCNH4Q9UQ05 1017 aa16.36■□□□□ 0.21
PDCD6-204ENST00000506909 CCL15-CCL14A0A0B4J2E2 113 aa16.35■□□□□ 0.21
PDCD6-204ENST00000506909 MBD4O95243 580 aa16.35■□□□□ 0.21
PDCD6-204ENST00000506909 CHGBP05060 677 aa16.35■□□□□ 0.21
PDCD6-204ENST00000506909 PTPRAP18433 802 aa16.35■□□□□ 0.21
PDCD6-204ENST00000506909 CAP2P40123 477 aa16.35■□□□□ 0.21
PDCD6-204ENST00000506909 CCL15Q16663 113 aa16.35■□□□□ 0.21
PDCD6-204ENST00000506909 CRACR2BQ8N4Y2 399 aaPredicted RBP16.35■□□□□ 0.21
PDCD6-204ENST00000506909 BRI3BPQ8WY22 251 aa16.35■□□□□ 0.21
PDCD6-204ENST00000506909 PUS7LQ9H0K6 701 aaKnown RBP16.35■□□□□ 0.21
PDCD6-204ENST00000506909 EHD4Q9H223 541 aa16.35■□□□□ 0.21
PDCD6-204ENST00000506909 DCP1AQ9NPI6 582 aaPredicted RBP16.35■□□□□ 0.21
PDCD6-204ENST00000506909 PICK1Q9NRD5 415 aa16.35■□□□□ 0.21
PDCD6-204ENST00000506909 CXCL11O14625 94 aa16.34■□□□□ 0.21
PDCD6-204ENST00000506909 RNF113AO15541 343 aaKnown RBP16.34■□□□□ 0.21
PDCD6-204ENST00000506909 SDR42E1Q8WUS8 393 aa16.34■□□□□ 0.21
PDCD6-204ENST00000506909 APPBP2Q92624 585 aa16.34■□□□□ 0.21
PDCD6-204ENST00000506909 DNAJC18Q9H819 358 aa16.34■□□□□ 0.21
PDCD6-204ENST00000506909 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
PDCD6-204ENST00000506909 SERPINB13Q9UIV8 391 aa16.34■□□□□ 0.21
PDCD6-204ENST00000506909 ZHX2Q9Y6X8 837 aa16.34■□□□□ 0.21
PDCD6-204ENST00000506909 TBC1D8O95759 1140 aa16.33■□□□□ 0.2
PDCD6-204ENST00000506909 RRP1BQ14684 758 aaKnown RBP16.33■□□□□ 0.2
PDCD6-204ENST00000506909 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
PDCD6-204ENST00000506909 TRIM34Q9BYJ4 488 aa16.33■□□□□ 0.2
PDCD6-204ENST00000506909 TBC1D2Q9BYX2 928 aa16.33■□□□□ 0.2
PDCD6-204ENST00000506909 OSBPL3Q9H4L5 887 aa16.33■□□□□ 0.2
PDCD6-204ENST00000506909 ZCCHC17Q9NP64 241 aaKnown RBP16.33■□□□□ 0.2
PDCD6-204ENST00000506909 GINM1Q9NU53 330 aa16.33■□□□□ 0.2
PDCD6-204ENST00000506909 AFG3L2Q9Y4W6 797 aa16.33■□□□□ 0.2
PDCD6-204ENST00000506909 PRKAB2O43741 272 aa16.32■□□□□ 0.2
PDCD6-204ENST00000506909 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
PDCD6-204ENST00000506909 ASNSP08243 561 aa16.32■□□□□ 0.2
PDCD6-204ENST00000506909 PLCD1P51178 756 aa16.32■□□□□ 0.2
PDCD6-204ENST00000506909 TATDN1Q6P1N9 297 aa16.32■□□□□ 0.2
PDCD6-204ENST00000506909 TICAM2Q86XR7 235 aa16.32■□□□□ 0.2
PDCD6-204ENST00000506909 PLEKHM2Q8IWE5 1019 aa16.32■□□□□ 0.2
PDCD6-204ENST00000506909 OSBP2Q969R2 916 aa16.32■□□□□ 0.2
PDCD6-204ENST00000506909 STRBPQ96SI9 672 aaKnown RBP16.32■□□□□ 0.2
PDCD6-204ENST00000506909 FSD1Q9BTV5 496 aa16.32■□□□□ 0.2
PDCD6-204ENST00000506909 MCM9Q9NXL9 1143 aa16.32■□□□□ 0.2
PDCD6-204ENST00000506909 TAOK2Q9UL54 1235 aa16.32■□□□□ 0.2
PDCD6-204ENST00000506909 TNRC18O15417 2968 aaPredicted RBP16.31■□□□□ 0.2
PDCD6-204ENST00000506909 GPR25O00155 361 aa16.31■□□□□ 0.2
PDCD6-204ENST00000506909 SLC4A8Q2Y0W8 1093 aa16.31■□□□□ 0.2
PDCD6-204ENST00000506909 FAM43AQ8N2R8 423 aa16.31■□□□□ 0.2
PDCD6-204ENST00000506909 R3HDMLQ9H3Y0 253 aa16.31■□□□□ 0.2
PDCD6-204ENST00000506909 SLC4A4Q9Y6R1 1079 aa16.31■□□□□ 0.2
PDCD6-204ENST00000506909 LOC285556D6RIA3 1793 aa16.31■□□□□ 0.2
PDCD6-204ENST00000506909 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
PDCD6-204ENST00000506909 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
PDCD6-204ENST00000506909 BTBD19C9JJ37 291 aa16.3■□□□□ 0.2
PDCD6-204ENST00000506909 GABPAQ06546 454 aa16.3■□□□□ 0.2
PDCD6-204ENST00000506909 MOGSQ13724 837 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms