RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 LDHAL6AQ6ZMR3 332 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 COA7Q96BR5 231 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 UBE2OQ9C0C9 1292 aaKnown RBP7.64□□□□□ -1.19
GYPB-204ENST00000504951 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.64□□□□□ -1.19
GYPB-204ENST00000504951 TMOD2Q9NZR1 351 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 GJD2Q9UKL4 321 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 SPEF2Q9C093 1822 aa7.64□□□□□ -1.19
GYPB-204ENST00000504951 ELL2O00472 640 aaPredicted RBP7.63□□□□□ -1.19
GYPB-204ENST00000504951 HMGCRP04035 888 aa7.63□□□□□ -1.19
GYPB-204ENST00000504951 INPP5BP32019 993 aa7.63□□□□□ -1.19
GYPB-204ENST00000504951 FAM110CQ1W6H9 321 aa7.63□□□□□ -1.19
GYPB-204ENST00000504951 MAP3K21Q5TCX8 1036 aa7.63□□□□□ -1.19
GYPB-204ENST00000504951 KCTD12Q96CX2 325 aaKnown RBP7.63□□□□□ -1.19
GYPB-204ENST00000504951 STK31Q9BXU1 1019 aa7.63□□□□□ -1.19
GYPB-204ENST00000504951 C11orf49Q9H6J7 331 aa7.63□□□□□ -1.19
GYPB-204ENST00000504951 HMX1Q9NP08 348 aaPredicted RBP7.63□□□□□ -1.19
GYPB-204ENST00000504951 AFG3L2Q9Y4W6 797 aa7.63□□□□□ -1.19
GYPB-204ENST00000504951 ARIH1Q9Y4X5 557 aaPredicted RBP7.63□□□□□ -1.19
GYPB-204ENST00000504951 PHF20L1A8MW92 1017 aa7.62□□□□□ -1.19
GYPB-204ENST00000504951 TNPO2O14787 897 aaKnown RBP7.62□□□□□ -1.19
GYPB-204ENST00000504951 CYP2C8P10632 490 aa7.62□□□□□ -1.19
GYPB-204ENST00000504951 XRCC5P13010 732 aaKnown RBP7.62□□□□□ -1.19
GYPB-204ENST00000504951 ELNP15502 786 aa7.62□□□□□ -1.19
GYPB-204ENST00000504951 GCLCP48506 637 aaPredicted RBP7.62□□□□□ -1.19
GYPB-204ENST00000504951 CCDC57Q2TAC2 916 aa7.62□□□□□ -1.19
GYPB-204ENST00000504951 TRMT44Q8IYL2 757 aaKnown RBP7.62□□□□□ -1.19
GYPB-204ENST00000504951 C7orf61Q8IZ16 206 aa7.62□□□□□ -1.19
GYPB-204ENST00000504951 DIS3LQ8TF46 1054 aaKnown RBP7.62□□□□□ -1.19
GYPB-204ENST00000504951 DNAAF4Q8WXU2 420 aa7.62□□□□□ -1.19
GYPB-204ENST00000504951 KCNK17Q96T54 332 aa7.62□□□□□ -1.19
GYPB-204ENST00000504951 TBC1D2Q9BYX2 928 aa7.62□□□□□ -1.19
GYPB-204ENST00000504951 DOCK3Q8IZD9 2030 aa7.62□□□□□ -1.19
GYPB-204ENST00000504951 MUC3AQ02505 3323 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 MROH5Q6ZUA9 1318 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 CACNA1FO60840 1977 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 TMEM265A0A087WTH1 108 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 APAF1O14727 1248 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 CTNND1O60716 968 aaKnown RBP7.61□□□□□ -1.19
GYPB-204ENST00000504951 PTPRAP18433 802 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 WDR43Q15061 677 aaKnown RBP eCLIP7.61□□□□□ -1.19
GYPB-204ENST00000504951 GRIK5Q16478 980 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 TSPYL6Q8N831 410 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 PNMA3Q9UL41 463 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 ZMYND8Q9ULU4 1186 aaPredicted RBP7.61□□□□□ -1.19
GYPB-204ENST00000504951 AGTPBP1Q9UPW5 1226 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 A0A1B0GUL6 1792 aa7.61□□□□□ -1.19
GYPB-204ENST00000504951 ATRNL1Q5VV63 1379 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 PFASO15067 1338 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 GYG1P46976 350 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 FLIIQ13045 1269 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 CCDC27Q2M243 656 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 CAVIN4Q5BKX8 364 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 BEND3Q5T5X7 828 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 LMBR1LQ6UX01 489 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 MIGA2Q7L4E1 593 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 G2E3Q7L622 706 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 SCYL3Q8IZE3 742 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 PROCA1Q8NCQ7 364 aaPredicted RBP7.6□□□□□ -1.19
GYPB-204ENST00000504951 WDR66Q8TBY9 1149 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 CDX2Q99626 313 aaPredicted RBP7.6□□□□□ -1.19
GYPB-204ENST00000504951 IDI2Q9BXS1 227 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 SLC4A5Q9BY07 1137 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 SEMA6BQ9H3T3 888 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 CNNM1Q9NRU3 951 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 MORF4L1Q9UBU8 362 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 JAG2Q9Y219 1238 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 ZHX2Q9Y6X8 837 aa7.6□□□□□ -1.19
GYPB-204ENST00000504951 ENTPD3O75355 529 aa7.59□□□□□ -1.19
GYPB-204ENST00000504951 RGS20O76081 388 aa7.59□□□□□ -1.19
GYPB-204ENST00000504951 PDE8BO95263 885 aa7.59□□□□□ -1.19
GYPB-204ENST00000504951 COL9A1P20849 921 aa7.59□□□□□ -1.19
GYPB-204ENST00000504951 CACNB3P54284 484 aa7.59□□□□□ -1.19
GYPB-204ENST00000504951 SMAD3P84022 425 aaKnown RBP7.59□□□□□ -1.19
GYPB-204ENST00000504951 CCDC184Q52MB2 194 aa7.59□□□□□ -1.19
GYPB-204ENST00000504951 ZNF697Q5TEC3 545 aa7.59□□□□□ -1.19
GYPB-204ENST00000504951 VGLL2Q8N8G2 317 aa7.59□□□□□ -1.19
GYPB-204ENST00000504951 OXER1Q8TDS5 423 aa7.59□□□□□ -1.19
GYPB-204ENST00000504951 PRKRIP1Q9H875 184 aaPredicted RBP7.59□□□□□ -1.19
GYPB-204ENST00000504951 PICK1Q9NRD5 415 aa7.59□□□□□ -1.19
GYPB-204ENST00000504951 UTYO14607 1347 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 IL16Q14005 1332 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 GRM8O00222 908 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 ALDH1L1O75891 902 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 SYN1P17600 705 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 FGFR2P21802 821 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 PLA2G5P39877 138 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 PABPC4Q13310 644 aaKnown RBP eCLIP7.58□□□□□ -1.22e-6■■□□□ 11.4
GYPB-204ENST00000504951 TWISTNBQ3B726 338 aaPredicted RBP7.58□□□□□ -1.2
GYPB-204ENST00000504951 RABL6Q3YEC7 729 aaPredicted RBP7.58□□□□□ -1.2
GYPB-204ENST00000504951 TAF7LQ5H9L4 462 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 SH3D19Q5HYK7 790 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 TJAP1Q5JTD0 557 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 EPHA10Q5JZY3 1008 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 CDC42EP5Q6NZY7 148 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 VPS37DQ86XT2 251 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 ZNF454Q8N9F8 522 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 MAFAQ8NHW3 353 aaPredicted RBP7.58□□□□□ -1.2
GYPB-204ENST00000504951 SMCR8Q8TEV9 937 aaPredicted RBP7.58□□□□□ -1.2
GYPB-204ENST00000504951 USP6NLQ92738 828 aa7.58□□□□□ -1.2
GYPB-204ENST00000504951 ZNF594Q96JF6 807 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms