RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 STK11IPQ8N1F8 1099 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 IGDCC4Q8TDY8 1250 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 TEKT1Q969V4 418 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 INTS4Q96HW7 963 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 MRIQ9BWK5 157 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 MCM9Q9NXL9 1143 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 ZSWIM5Q9P217 1185 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 SAP30BPQ9UHR5 308 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 HPS5Q9UPZ3 1129 aa8.16□□□□□ -1.1
TOPBP1-203ENST00000503464 MYH15Q9Y2K3 1946 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 ORC4O43929 436 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 PRDM1O75626 825 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 PLCG2P16885 1265 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 USP5P45974 858 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 CACNB3P54284 484 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 SCRN1Q12765 414 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 ANKRD1Q15327 319 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 SEC23AQ15436 765 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 CHADLQ6NUI6 762 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 MFSD6Q6ZSS7 791 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 RALYLQ86SE5 291 aaKnown RBP8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 CERS3Q8IU89 383 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 ZFPM1Q8IX07 1006 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 SLF2Q8IX21 1173 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 SLC44A5Q8NCS7 719 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 GTF3C6Q969F1 213 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 DYNLL2Q96FJ2 89 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 ZSCAN31Q96LW9 406 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 NOL10Q9BSC4 688 aaKnown RBP8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 SYT17Q9BSW7 474 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 LY9Q9HBG7 655 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 SH2B1Q9NRF2 756 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 SERPINA10Q9UK55 444 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 ZDHHC9Q9Y397 364 aa8.15□□□□□ -1.1
TOPBP1-203ENST00000503464 NID2Q14112 1375 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 MYO3BQ8WXR4 1341 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 ZNF541Q9H0D2 1346 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 MYH6P13533 1939 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 FZD9O00144 591 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 PFKFB2O60825 505 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 CTDNEP1O95476 244 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 SLURP2P0DP57 97 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 CD44P16070 742 aaKnown RBP8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 YBX3P16989 372 aaKnown RBP eCLIP8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 PDIA3P30101 505 aaKnown RBP8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 STK3Q13188 491 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 PICALMQ13492 652 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 CFAP100Q494V2 611 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 RRP12Q5JTH9 1297 aaKnown RBP8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 SH3BP5LQ7L8J4 393 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 ZBED3Q96IU2 234 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 PRMT6Q96LA8 375 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 ZKSCAN3Q9BRR0 538 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 KRT23Q9C075 422 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 OSBPL5Q9H0X9 879 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 RNF41Q9H4P4 317 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 CNNM2Q9H8M5 875 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 USP40Q9NVE5 1235 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 CHMP5Q9NZZ3 219 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 FAM198AQ9UFP1 575 aa8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 CIZ1Q9ULV3 898 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-203ENST00000503464 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 TCHHQ07283 1943 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 MYH4Q9Y623 1939 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 CNTNAP1P78357 1384 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 UTRNP46939 3433 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 KLF18A0A0U1RQI7 1052 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 NMT2O60551 498 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 JAK2O60674 1132 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 EGFRP00533 1210 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 HSP90AA1P07900 732 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 PCP11498 1178 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 GABPAQ06546 454 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 TRDNQ13061 729 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 RAB3GAP1Q15042 981 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 FAM47AQ5JRC9 791 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 CIAPIN1Q6FI81 312 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 C16orf86Q6ZW13 317 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 SGMS1Q86VZ5 419 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 RAB11FIP4Q86YS3 637 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 AGBL3Q8NEM8 1001 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 ZNF274Q96GC6 653 aaPredicted RBP8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 TMEM87BQ96K49 555 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 IDI2Q9BXS1 227 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 DNAJC18Q9H819 358 aa8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 NCOA5Q9HCD5 579 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 FAM217BQ9NTX9 383 aaPredicted RBP8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 ANGEL1Q9UNK9 670 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-203ENST00000503464 TNKSO95271 1327 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 DDTLA6NHG4 134 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 GOLGA8BA8MQT2 603 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 RASA1P20936 1047 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 LIFRP42702 1097 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 ZNF280AP59817 542 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 CCT2P78371 535 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 TMEM67Q5HYA8 995 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 RCSD1Q6JBY9 416 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 APOA5Q6Q788 366 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 ENAHQ8N8S7 591 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms