RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 FLT1P17948 1338 aa23.96■■□□□ 1.43
CTSD-206ENST00000497544 RAD50Q92878 1312 aa23.96■■□□□ 1.43
CTSD-206ENST00000497544 ZNF589Q86UQ0 364 aaPredicted RBP23.96■■□□□ 1.43
CTSD-206ENST00000497544 ZNF296Q8WUU4 475 aaPredicted RBP23.96■■□□□ 1.43
CTSD-206ENST00000497544 NACAP1Q9BZK3 213 aa23.96■■□□□ 1.43
CTSD-206ENST00000497544 TMEM39BQ9GZU3 492 aa23.96■■□□□ 1.43
CTSD-206ENST00000497544 OSBPL5Q9H0X9 879 aaPredicted RBP23.96■■□□□ 1.43
CTSD-206ENST00000497544 GSG1L2A8MUP6 293 aa23.95■■□□□ 1.42
CTSD-206ENST00000497544 PRAMEF18Q5VWM3 479 aa23.95■■□□□ 1.42
CTSD-206ENST00000497544 ZFPM1Q8IX07 1006 aa23.95■■□□□ 1.42
CTSD-206ENST00000497544 C2orf69Q8N8R5 385 aa23.95■■□□□ 1.42
CTSD-206ENST00000497544 DCP1AQ9NPI6 582 aaPredicted RBP23.95■■□□□ 1.42
CTSD-206ENST00000497544 MCM9Q9NXL9 1143 aa23.95■■□□□ 1.42
CTSD-206ENST00000497544 SAP30BPQ9UHR5 308 aaKnown RBP23.95■■□□□ 1.42
CTSD-206ENST00000497544 RBBP6Q7Z6E9 1792 aaKnown RBP23.95■■□□□ 1.42
CTSD-206ENST00000497544 PAPPA2Q9BXP8 1791 aa23.95■■□□□ 1.42
CTSD-206ENST00000497544 RPAP1Q9BWH6 1393 aaPredicted RBP23.94■■□□□ 1.42
CTSD-206ENST00000497544 SGSM2O43147 1006 aa23.94■■□□□ 1.42
CTSD-206ENST00000497544 POLR3DP05423 398 aaPredicted RBP23.94■■□□□ 1.42
CTSD-206ENST00000497544 SUPT20HL1Q3ZLR7 823 aa23.94■■□□□ 1.42
CTSD-206ENST00000497544 GIMAP6Q6P9H5 292 aa23.94■■□□□ 1.42
CTSD-206ENST00000497544 FBXO46Q6PJ61 603 aaPredicted RBP23.94■■□□□ 1.42
CTSD-206ENST00000497544 ESYT1Q9BSJ8 1104 aa23.94■■□□□ 1.42
CTSD-206ENST00000497544 DHX36Q9H2U1 1008 aaKnown RBP23.94■■□□□ 1.42
CTSD-206ENST00000497544 MYH1P12882 1939 aa23.93■■□□□ 1.42
CTSD-206ENST00000497544 NF2P35240 595 aa23.93■■□□□ 1.42
CTSD-206ENST00000497544 KIAA1211Q6ZU35 1233 aa23.93■■□□□ 1.42
CTSD-206ENST00000497544 AMOTL1Q8IY63 956 aa23.93■■□□□ 1.42
CTSD-206ENST00000497544 IFNL3Q8IZI9 196 aa23.93■■□□□ 1.42
CTSD-206ENST00000497544 CDCA5Q96FF9 252 aa23.93■■□□□ 1.42
CTSD-206ENST00000497544 PALD1Q9ULE6 856 aa23.93■■□□□ 1.42
CTSD-206ENST00000497544 FOCADQ5VW36 1801 aa23.93■■□□□ 1.42
CTSD-206ENST00000497544 HTTP42858 3142 aa23.93■■□□□ 1.42
CTSD-206ENST00000497544 DDTLA6NHG4 134 aaPredicted RBP23.92■■□□□ 1.42
CTSD-206ENST00000497544 HSPD1P10809 573 aaKnown RBP23.92■■□□□ 1.42
CTSD-206ENST00000497544 TDO2P48775 406 aa23.92■■□□□ 1.42
CTSD-206ENST00000497544 NBPF12Q5TAG4 269 aaPredicted RBP23.92■■□□□ 1.42
CTSD-206ENST00000497544 VPS53Q5VIR6 699 aa23.92■■□□□ 1.42
CTSD-206ENST00000497544 TTC6Q86TZ1 520 aa23.92■■□□□ 1.42
CTSD-206ENST00000497544 HOOK2Q96ED9 719 aa23.92■■□□□ 1.42
CTSD-206ENST00000497544 BAZ2AQ9UIF9 1905 aaKnown RBP23.91■■□□□ 1.42
CTSD-206ENST00000497544 TEPSINQ96N21 525 aa23.91■■□□□ 1.42
CTSD-206ENST00000497544 NAPBQ9H115 298 aa23.91■■□□□ 1.42
CTSD-206ENST00000497544 IL25Q9H293 177 aa23.91■■□□□ 1.42
CTSD-206ENST00000497544 COLQQ9Y215 455 aaPredicted RBP23.91■■□□□ 1.42
CTSD-206ENST00000497544 POTEFA5A3E0 1075 aa23.9■■□□□ 1.42
CTSD-206ENST00000497544 USP17L12C9JPN9 530 aa23.9■■□□□ 1.42
CTSD-206ENST00000497544 USP17L21D6R901 530 aa23.9■■□□□ 1.42
CTSD-206ENST00000497544 HLA-DOAP06340 250 aa23.9■■□□□ 1.42
CTSD-206ENST00000497544 SH3BP5LQ7L8J4 393 aa23.9■■□□□ 1.42
CTSD-206ENST00000497544 PI4KBQ9UBF8 816 aa23.9■■□□□ 1.42
CTSD-206ENST00000497544 TRIOBPQ9H2D6 2365 aa23.89■■□□□ 1.42
CTSD-206ENST00000497544 TBC1D8O95759 1140 aa23.89■■□□□ 1.41
CTSD-206ENST00000497544 ALX1Q15699 326 aa23.89■■□□□ 1.41
CTSD-206ENST00000497544 SLC4A8Q2Y0W8 1093 aa23.89■■□□□ 1.41
CTSD-206ENST00000497544 FOXP4Q8IVH2 680 aaPredicted RBP23.89■■□□□ 1.41
CTSD-206ENST00000497544 DSCC1Q9BVC3 393 aa23.89■■□□□ 1.41
CTSD-206ENST00000497544 EPB41L4AQ9HCS5 686 aaPredicted RBP23.89■■□□□ 1.41
CTSD-206ENST00000497544 BRCA2P51587 3418 aa23.88■■□□□ 1.41
CTSD-206ENST00000497544 CENPFP49454 3210 aa23.88■■□□□ 1.41
CTSD-206ENST00000497544 CTR9Q6PD62 1173 aa23.88■■□□□ 1.41
CTSD-206ENST00000497544 RASAL3Q86YV0 1011 aa23.88■■□□□ 1.41
CTSD-206ENST00000497544 REM2Q8IYK8 340 aaPredicted RBP23.88■■□□□ 1.41
CTSD-206ENST00000497544 ARPP21Q9UBL0 812 aaPredicted RBP23.88■■□□□ 1.41
CTSD-206ENST00000497544 ATRNL1Q5VV63 1379 aa23.88■■□□□ 1.41
CTSD-206ENST00000497544 COL2A1P02458 1487 aaPredicted RBP23.87■■□□□ 1.41
CTSD-206ENST00000497544 NAV1Q8NEY1 1877 aa23.87■■□□□ 1.41
CTSD-206ENST00000497544 MINDY4BA8MYZ0 360 aa23.87■■□□□ 1.41
CTSD-206ENST00000497544 FGAP02671 866 aa23.87■■□□□ 1.41
CTSD-206ENST00000497544 SBK1Q52WX2 424 aa23.87■■□□□ 1.41
CTSD-206ENST00000497544 DCAF15Q66K64 600 aa23.87■■□□□ 1.41
CTSD-206ENST00000497544 CDAN1Q8IWY9 1227 aa23.87■■□□□ 1.41
CTSD-206ENST00000497544 TRIM34Q9BYJ4 488 aa23.87■■□□□ 1.41
CTSD-206ENST00000497544 FOXP2O15409 715 aa23.86■■□□□ 1.41
CTSD-206ENST00000497544 PPP1R12BO60237 982 aaPredicted RBP23.86■■□□□ 1.41
CTSD-206ENST00000497544 PRKG1Q13976 671 aa23.86■■□□□ 1.41
CTSD-206ENST00000497544 TTLL12Q14166 644 aaPredicted RBP23.86■■□□□ 1.41
CTSD-206ENST00000497544 C12orf60Q5U649 245 aa23.86■■□□□ 1.41
CTSD-206ENST00000497544 MIGA2Q7L4E1 593 aa23.86■■□□□ 1.41
CTSD-206ENST00000497544 CRACR2BQ8N4Y2 399 aaPredicted RBP23.86■■□□□ 1.41
CTSD-206ENST00000497544 SLC17A8Q8NDX2 589 aa23.86■■□□□ 1.41
CTSD-206ENST00000497544 ANO2Q9NQ90 1003 aa23.86■■□□□ 1.41
CTSD-206ENST00000497544 CTNNA3Q9UI47 895 aa23.86■■□□□ 1.41
CTSD-206ENST00000497544 CYP2D6P10635 497 aa23.85■■□□□ 1.41
CTSD-206ENST00000497544 PLCD1P51178 756 aa23.85■■□□□ 1.41
CTSD-206ENST00000497544 PTH1RQ03431 593 aa23.85■■□□□ 1.41
CTSD-206ENST00000497544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.85■■□□□ 1.41
CTSD-206ENST00000497544 CYP2D7A0A087X1C5 515 aa23.84■■□□□ 1.41
CTSD-206ENST00000497544 TBC1D12O60347 775 aa23.84■■□□□ 1.41
CTSD-206ENST00000497544 REC8O95072 547 aa23.84■■□□□ 1.41
CTSD-206ENST00000497544 ARMC9Q7Z3E5 817 aa23.84■■□□□ 1.41
CTSD-206ENST00000497544 SERPINB13Q9UIV8 391 aa23.84■■□□□ 1.41
CTSD-206ENST00000497544 CUL9Q8IWT3 2517 aa23.84■■□□□ 1.41
CTSD-206ENST00000497544 KIAA0100Q14667 2235 aaKnown RBP23.84■■□□□ 1.41
CTSD-206ENST00000497544 A0A0C4DFX4 3053 aa23.83■■□□□ 1.41
CTSD-206ENST00000497544 GPR25O00155 361 aa23.83■■□□□ 1.41
CTSD-206ENST00000497544 EIF5BO60841 1220 aaKnown RBP23.83■■□□□ 1.41
CTSD-206ENST00000497544 ZNF341Q9BYN7 854 aa23.83■■□□□ 1.41
CTSD-206ENST00000497544 EHD4Q9H223 541 aa23.83■■□□□ 1.41
CTSD-206ENST00000497544 HERC5Q9UII4 1024 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 293.4 ms