RNA–Protein interactions for RNA: ENST00000494454.5

TXNRD2-215, Transcript of thioredoxin reductase 2, human

TSL 1 (best)

Gene TXNRD2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TXNRD2-215	ENST00000494454	PRDM1	O75626	825 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	IARS	P41252	1262 aa	Known RBP	18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	RTN1	Q16799	776 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	MSL1	Q68DK7	614 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	CERS3	Q8IU89	383 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	TBC1D22A	Q8WUA7	517 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	MASTL	Q96GX5	879 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	AIFM3	Q96NN9	605 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	USP28	Q96RU2	1077 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	MYH2	Q9UKX2	1941 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	FMNL1	O95466	1100 aa	Predicted RBP	18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	SLC3A2	P08195	630 aa	Known RBP	18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	KIF23	Q02241	960 aa	Predicted RBP	18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	BRAP	Q7Z569	592 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	CAMKK2	Q96RR4	588 aa		18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.4	■□□□□ 0.54
TXNRD2-215	ENST00000494454	DLEC1	Q9Y238	1755 aa		18.39	■□□□□ 0.54
TXNRD2-215	ENST00000494454	LIG1	P18858	919 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	MFSD14B	Q5SR56	506 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	FAM163A	Q96GL9	167 aa	Predicted RBP	18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	COA1	Q9GZY4	146 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	TSPY26P	Q9H489	355 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	MCM9	Q9NXL9	1143 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	GPR75-ASB3	A0A0A6YYF3	556 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	CCDC196	A0A1B0GTZ2	297 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	USP17L8	P0C7I0	530 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	C12orf60	Q5U649	245 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	IQCA1	Q86XH1	822 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	FANCB	Q8NB91	859 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	ROBO3	Q96MS0	1386 aa		18.39	■□□□□ 0.53
TXNRD2-215	ENST00000494454	GOLGA6L4	A6NEF3	574 aa		18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	KIF28P	B7ZC32	967 aa		18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	USP5	P45974	858 aa		18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	SSRP1	Q08945	709 aa	Known RBP	18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	PPP2R5B	Q15173	497 aa		18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	KRT40	Q6A162	431 aa		18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	OLFM4	Q6UX06	510 aa		18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	NBPF11	Q86T75	865 aa		18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	MPND	Q8N594	471 aa		18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	NOL10	Q9BSC4	688 aa	Known RBP	18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	RTEL1	Q9NZ71	1219 aa		18.38	■□□□□ 0.53
TXNRD2-215	ENST00000494454	NT5C2	P49902	561 aa		18.37	■□□□□ 0.53
TXNRD2-215	ENST00000494454	CEBPZ	Q03701	1054 aa	Known RBP	18.37	■□□□□ 0.53
TXNRD2-215	ENST00000494454	PDE4B	Q07343	736 aa		18.37	■□□□□ 0.53
TXNRD2-215	ENST00000494454	SLC15A2	Q16348	729 aa		18.37	■□□□□ 0.53
TXNRD2-215	ENST00000494454	SLC26A6	Q9BXS9	759 aa		18.37	■□□□□ 0.53
TXNRD2-215	ENST00000494454	GAK	O14976	1311 aa		18.37	■□□□□ 0.53
TXNRD2-215	ENST00000494454	BTD	P43251	543 aa		18.37	■□□□□ 0.53
TXNRD2-215	ENST00000494454	EZH2	Q15910	746 aa	Known RBP	18.37	■□□□□ 0.53
TXNRD2-215	ENST00000494454	IFIT1B	Q5T764	474 aa	Known RBP	18.37	■□□□□ 0.53
TXNRD2-215	ENST00000494454	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.37	■□□□□ 0.53
TXNRD2-215	ENST00000494454	UBE2Q2L	H0YL09	131 aa		18.36	■□□□□ 0.53
TXNRD2-215	ENST00000494454	MYSM1	Q5VVJ2	828 aa		18.36	■□□□□ 0.53
TXNRD2-215	ENST00000494454	DPP8	Q6V1X1	898 aa	Predicted RBP	18.36	■□□□□ 0.53
TXNRD2-215	ENST00000494454	TGFBRAP1	Q8WUH2	860 aa		18.36	■□□□□ 0.53
TXNRD2-215	ENST00000494454	NUP133	Q8WUM0	1156 aa		18.36	■□□□□ 0.53
TXNRD2-215	ENST00000494454	WASF1	Q92558	559 aa		18.36	■□□□□ 0.53
TXNRD2-215	ENST00000494454	NAV1	Q8NEY1	1877 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	RIMBP2	O15034	1052 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	TROAP	Q12815	778 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	SLF2	Q8IX21	1173 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	FUCA2	Q9BTY2	467 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	POLR3E	Q9NVU0	708 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	QSER1	Q2KHR3	1735 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	POLR3D	P05423	398 aa	Predicted RBP	18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	PLCG2	P16885	1265 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	GTF2I	P78347	998 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	EN1	Q05925	392 aa	Predicted RBP	18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	STYK1	Q6J9G0	422 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	CATIP	Q7Z7H3	387 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	C2CD5	Q86YS7	1000 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	TRIM22	Q8IYM9	498 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	DDX19A	Q9NUU7	478 aa	Known RBP	18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	DACT1	Q9NYF0	836 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	SUGT1	Q9Y2Z0	365 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	CDK5RAP2	Q96SN8	1893 aa		18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	DDX60L	Q5H9U9	1706 aa	Known RBP	18.35	■□□□□ 0.53
TXNRD2-215	ENST00000494454	DDAH1	O94760	285 aa		18.34	■□□□□ 0.53
TXNRD2-215	ENST00000494454	U2AF2	P26368	475 aa	Known RBP eCLIP	18.34	■□□□□ 0.53
TXNRD2-215	ENST00000494454	GUCY1A2	P33402	732 aa		18.34	■□□□□ 0.53
TXNRD2-215	ENST00000494454	RHBDL3	P58872	404 aa		18.34	■□□□□ 0.53
TXNRD2-215	ENST00000494454	FUT2	Q10981	343 aa		18.34	■□□□□ 0.53
TXNRD2-215	ENST00000494454	FAM47A	Q5JRC9	791 aa		18.34	■□□□□ 0.53
TXNRD2-215	ENST00000494454	LINC00301	Q8NCQ3	95 aa		18.34	■□□□□ 0.53
TXNRD2-215	ENST00000494454	BICD2	Q8TD16	824 aa		18.34	■□□□□ 0.53
TXNRD2-215	ENST00000494454	NMT2	O60551	498 aa		18.33	■□□□□ 0.53
TXNRD2-215	ENST00000494454	YEATS4	O95619	227 aa		18.33	■□□□□ 0.53
TXNRD2-215	ENST00000494454	CALM1	P0DP23	149 aa		18.33	■□□□□ 0.53
TXNRD2-215	ENST00000494454	CALM2	P0DP24	149 aa		18.33	■□□□□ 0.53
TXNRD2-215	ENST00000494454	CALM3	P0DP25	149 aa		18.33	■□□□□ 0.53
TXNRD2-215	ENST00000494454	NUP62CL	Q9H1M0	184 aa		18.33	■□□□□ 0.53
TXNRD2-215	ENST00000494454	STK32B	Q9NY57	414 aa		18.33	■□□□□ 0.53
TXNRD2-215	ENST00000494454	NR1I2	O75469	434 aa		18.33	■□□□□ 0.52
TXNRD2-215	ENST00000494454	DEXI	O95424	95 aa		18.33	■□□□□ 0.52
TXNRD2-215	ENST00000494454	TRIM29	Q14134	588 aa		18.33	■□□□□ 0.52
TXNRD2-215	ENST00000494454	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.33	■□□□□ 0.52	1e-8	■□□□□ 8.5
TXNRD2-215	ENST00000494454	PPP1R9B	Q96SB3	815 aa		18.33	■□□□□ 0.52
TXNRD2-215	ENST00000494454	RNF26	Q9BY78	433 aa	Predicted RBP	18.33	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms