RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 HEXIM2Q96MH2 286 aaKnown RBP7.04□□□□□ -1.28
HMGN1-218ENST00000490032 PRDM10Q9NQV6 1147 aa7.04□□□□□ -1.28
HMGN1-218ENST00000490032 PICK1Q9NRD5 415 aa7.04□□□□□ -1.28
HMGN1-218ENST00000490032 IGF2BP3O00425 579 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMGN1-218ENST00000490032 CEACAM5P06731 702 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 ERCC3P19447 782 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 CAP2P40123 477 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 ST13P50502 369 aaKnown RBP7.03□□□□□ -1.28
HMGN1-218ENST00000490032 PSMD2Q13200 908 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 MEI1Q5TIA1 1274 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.03□□□□□ -1.28
HMGN1-218ENST00000490032 CDC37L1Q7L3B6 337 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 HDXQ7Z353 690 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 SPRED2Q7Z698 418 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 ZNF507Q8TCN5 953 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 WNT10AQ9GZT5 417 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 VAV3Q9UKW4 847 aa7.03□□□□□ -1.28
HMGN1-218ENST00000490032 KRTAP9-6A0A140TA67 174 aa7.02□□□□□ -1.29
HMGN1-218ENST00000490032 PAX4O43316 350 aa7.02□□□□□ -1.29
HMGN1-218ENST00000490032 CTSHP09668 335 aa7.02□□□□□ -1.29
HMGN1-218ENST00000490032 LIG3P49916 1009 aa7.02□□□□□ -1.29
HMGN1-218ENST00000490032 PRKCQQ04759 706 aa7.02□□□□□ -1.29
HMGN1-218ENST00000490032 IFI16Q16666 785 aaKnown RBP7.02□□□□□ -1.29
HMGN1-218ENST00000490032 FMNL2Q96PY5 1086 aa7.02□□□□□ -1.29
HMGN1-218ENST00000490032 NOC4LQ9BVI4 516 aaKnown RBP7.02□□□□□ -1.29
HMGN1-218ENST00000490032 TNKS2Q9H2K2 1166 aa7.02□□□□□ -1.29
HMGN1-218ENST00000490032 PLAGL2Q9UPG8 496 aa7.02□□□□□ -1.29
HMGN1-218ENST00000490032 PCDHB5Q9Y5E4 795 aa7.02□□□□□ -1.29
HMGN1-218ENST00000490032 TACC3Q9Y6A5 838 aa7.02□□□□□ -1.29
HMGN1-218ENST00000490032 USP31Q70CQ4 1352 aa7.01□□□□□ -1.29
HMGN1-218ENST00000490032 LRIG2O94898 1065 aa7.01□□□□□ -1.29
HMGN1-218ENST00000490032 EOMESO95936 686 aa7.01□□□□□ -1.29
HMGN1-218ENST00000490032 RLBP1P12271 317 aa7.01□□□□□ -1.29
HMGN1-218ENST00000490032 CDK8P49336 464 aa7.01□□□□□ -1.29
HMGN1-218ENST00000490032 SLBPQ14493 270 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGN1-218ENST00000490032 TAF1CQ15572 869 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-218ENST00000490032 WIPI1Q5MNZ9 446 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-218ENST00000490032 ZNF574Q6ZN55 896 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-218ENST00000490032 ARMCX6Q7L4S7 300 aa7.01□□□□□ -1.29
HMGN1-218ENST00000490032 FBRSQ9HAH7 460 aa7.01□□□□□ -1.29
HMGN1-218ENST00000490032 GTF2IRD1Q9UHL9 959 aa7.01□□□□□ -1.29
HMGN1-218ENST00000490032 TMEM265A0A087WTH1 108 aa7□□□□□ -1.29
HMGN1-218ENST00000490032 PRAMEF27A3QJZ7 478 aa7□□□□□ -1.29
HMGN1-218ENST00000490032 GFRA2O00451 464 aa7□□□□□ -1.29
HMGN1-218ENST00000490032 XPCQ01831 940 aaPredicted RBP7□□□□□ -1.29
HMGN1-218ENST00000490032 BNIP3Q12983 259 aa7□□□□□ -1.29
HMGN1-218ENST00000490032 SEPT6Q14141 434 aa7□□□□□ -1.29
HMGN1-218ENST00000490032 CCDC27Q2M243 656 aa7□□□□□ -1.29
HMGN1-218ENST00000490032 ARHGAP27Q6ZUM4 889 aa7□□□□□ -1.29
HMGN1-218ENST00000490032 KRTAP4-12Q9BQ66 201 aa7□□□□□ -1.29
HMGN1-218ENST00000490032 SNX11Q9Y5W9 270 aa7□□□□□ -1.29
HMGN1-218ENST00000490032 CD8BP10966 210 aa6.99□□□□□ -1.29
HMGN1-218ENST00000490032 ITGB5P18084 799 aa6.99□□□□□ -1.29
HMGN1-218ENST00000490032 TFE3P19532 575 aaPredicted RBP6.99□□□□□ -1.29
HMGN1-218ENST00000490032 MAP3K11Q16584 847 aa6.99□□□□□ -1.29
HMGN1-218ENST00000490032 HRASLS5Q96KN8 279 aa6.99□□□□□ -1.29
HMGN1-218ENST00000490032 FOXQ1Q9C009 403 aa6.99□□□□□ -1.29
HMGN1-218ENST00000490032 GZF1Q9H116 711 aaPredicted RBP6.99□□□□□ -1.29
HMGN1-218ENST00000490032 SLITRK5O94991 958 aa6.98□□□□□ -1.29
HMGN1-218ENST00000490032 LMNB1P20700 586 aa6.98□□□□□ -1.29
HMGN1-218ENST00000490032 FUT4P22083 530 aa6.98□□□□□ -1.29
HMGN1-218ENST00000490032 ETF1P62495 437 aaKnown RBP6.98□□□□□ -1.29
HMGN1-218ENST00000490032 TAGLNQ01995 201 aaKnown RBP6.98□□□□□ -1.29
HMGN1-218ENST00000490032 NKG7Q16617 165 aa6.98□□□□□ -1.29
HMGN1-218ENST00000490032 HID1Q8IV36 788 aa6.98□□□□□ -1.29
HMGN1-218ENST00000490032 SPACA3Q8IXA5 215 aa6.98□□□□□ -1.29
HMGN1-218ENST00000490032 CRELD1Q96HD1 420 aa6.98□□□□□ -1.29
HMGN1-218ENST00000490032 FAM161BQ96MY7 647 aa6.98□□□□□ -1.29
HMGN1-218ENST00000490032 MIR1-1HGQ9H1L0 117 aa6.98□□□□□ -1.29
HMGN1-218ENST00000490032 MAPK8IP1Q9UQF2 711 aa6.98□□□□□ -1.29
HMGN1-218ENST00000490032 SORBS3O60504 671 aa6.97□□□□□ -1.29
HMGN1-218ENST00000490032 ITIH2P19823 946 aa6.97□□□□□ -1.29
HMGN1-218ENST00000490032 GRK4P32298 578 aa6.97□□□□□ -1.29
HMGN1-218ENST00000490032 PLCL1Q15111 1095 aa6.97□□□□□ -1.29
HMGN1-218ENST00000490032 AOC3Q16853 763 aa6.97□□□□□ -1.29
HMGN1-218ENST00000490032 NKPD1Q17RQ9 610 aa6.97□□□□□ -1.29
HMGN1-218ENST00000490032 C22orf34Q6ZV56 151 aa6.97□□□□□ -1.29
HMGN1-218ENST00000490032 CCDC84Q86UT8 332 aaPredicted RBP6.97□□□□□ -1.29
HMGN1-218ENST00000490032 MFSD2AQ8NA29 543 aa6.97□□□□□ -1.29
HMGN1-218ENST00000490032 PHC3Q8NDX5 983 aa6.97□□□□□ -1.29
HMGN1-218ENST00000490032 PRDM5Q9NQX1 630 aaPredicted RBP6.97□□□□□ -1.29
HMGN1-218ENST00000490032 CST3P01034 146 aaPredicted RBP6.96□□□□□ -1.3
HMGN1-218ENST00000490032 JUNBP17275 347 aaPredicted RBP6.96□□□□□ -1.3
HMGN1-218ENST00000490032 RPL6Q02878 288 aaKnown RBP6.96□□□□□ -1.3
HMGN1-218ENST00000490032 TSNAXIP1Q2TAA8 658 aa6.96□□□□□ -1.3
HMGN1-218ENST00000490032 ZNF792Q3KQV3 632 aa6.96□□□□□ -1.3
HMGN1-218ENST00000490032 TLR6Q9Y2C9 796 aa6.96□□□□□ -1.3
HMGN1-218ENST00000490032 CD96P40200 585 aa6.95□□□□□ -1.3
HMGN1-218ENST00000490032 TXKP42681 527 aa6.95□□□□□ -1.3
HMGN1-218ENST00000490032 CLCN7P51798 805 aa6.95□□□□□ -1.3
HMGN1-218ENST00000490032 MRPL41Q8IXM3 137 aaKnown RBP6.95□□□□□ -1.3
HMGN1-218ENST00000490032 RNF114Q9Y508 228 aa6.95□□□□□ -1.3
HMGN1-218ENST00000490032 GNAT3A8MTJ3 354 aa6.94□□□□□ -1.3
HMGN1-218ENST00000490032 ZNF865P0CJ78 1059 aaPredicted RBP6.94□□□□□ -1.3
HMGN1-218ENST00000490032 ITGAEP38570 1179 aa6.94□□□□□ -1.3
HMGN1-218ENST00000490032 ANGEL2Q5VTE6 544 aaKnown RBP6.94□□□□□ -1.3
HMGN1-218ENST00000490032 PRAMEF13Q5VWM6 474 aa6.94□□□□□ -1.3
HMGN1-218ENST00000490032 ASB11Q8WXH4 323 aa6.94□□□□□ -1.3
HMGN1-218ENST00000490032 MIPEPQ99797 713 aa6.94□□□□□ -1.3
HMGN1-218ENST00000490032 RSRP1Q9BUV0 290 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms