RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 CYP7A1P22680 504 aa12.79□□□□□ -0.36
SCAMP4-208ENST00000489554 MAP3K12Q12852 859 aa12.79□□□□□ -0.36
SCAMP4-208ENST00000489554 TTF1Q15361 905 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-208ENST00000489554 FAM43AQ8N2R8 423 aa12.79□□□□□ -0.36
SCAMP4-208ENST00000489554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCAMP4-208ENST00000489554 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
SCAMP4-208ENST00000489554 AK9Q5TCS8 1911 aa12.78□□□□□ -0.36
SCAMP4-208ENST00000489554 BTBD19C9JJ37 291 aa12.78□□□□□ -0.36
SCAMP4-208ENST00000489554 CXCL11O14625 94 aa12.78□□□□□ -0.36
SCAMP4-208ENST00000489554 GSPT1P15170 499 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-208ENST00000489554 SP3Q02447 781 aa12.78□□□□□ -0.36
SCAMP4-208ENST00000489554 FBXO46Q6PJ61 603 aaPredicted RBP12.78□□□□□ -0.36
SCAMP4-208ENST00000489554 ADGRA1Q86SQ6 560 aa12.78□□□□□ -0.36
SCAMP4-208ENST00000489554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCAMP4-208ENST00000489554 HERC5Q9UII4 1024 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-208ENST00000489554 PTPRAP18433 802 aa12.77□□□□□ -0.37
SCAMP4-208ENST00000489554 ANKRD23Q86SG2 305 aa12.77□□□□□ -0.37
SCAMP4-208ENST00000489554 MAGEB6Q8N7X4 407 aa12.77□□□□□ -0.37
SCAMP4-208ENST00000489554 TGFBRAP1Q8WUH2 860 aa12.77□□□□□ -0.37
SCAMP4-208ENST00000489554 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
SCAMP4-208ENST00000489554 ANTXR1Q9H6X2 564 aa12.77□□□□□ -0.37
SCAMP4-208ENST00000489554 PI4KBQ9UBF8 816 aa12.77□□□□□ -0.37
SCAMP4-208ENST00000489554 HPS5Q9UPZ3 1129 aa12.77□□□□□ -0.37
SCAMP4-208ENST00000489554 ZHX2Q9Y6X8 837 aa12.77□□□□□ -0.37
SCAMP4-208ENST00000489554 TTC41PQ6P2S7 1318 aa12.77□□□□□ -0.37
SCAMP4-208ENST00000489554 TLR2O60603 784 aa12.76□□□□□ -0.37
SCAMP4-208ENST00000489554 ARHGEF6Q15052 776 aa12.76□□□□□ -0.37
SCAMP4-208ENST00000489554 TTC22Q5TAA0 569 aa12.76□□□□□ -0.37
SCAMP4-208ENST00000489554 OTOP1Q7RTM1 612 aa12.76□□□□□ -0.37
SCAMP4-208ENST00000489554 MAPKAPK5Q8IW41 473 aa12.76□□□□□ -0.37
SCAMP4-208ENST00000489554 ECHDC1Q9NTX5 307 aa12.76□□□□□ -0.37
SCAMP4-208ENST00000489554 AFG3L2Q9Y4W6 797 aa12.76□□□□□ -0.37
SCAMP4-208ENST00000489554 TRIM17Q9Y577 477 aa12.76□□□□□ -0.37
SCAMP4-208ENST00000489554 NDUFB9Q9Y6M9 179 aa12.76□□□□□ -0.37
SCAMP4-208ENST00000489554 FLT1P17948 1338 aa12.76□□□□□ -0.37
SCAMP4-208ENST00000489554 A0A0G2JLL6 359 aaPredicted RBP12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 PDHXO00330 501 aa12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 ATP5JP18859 108 aa12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 RGS19P49795 217 aa12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 FASTKD5Q7L8L6 764 aaKnown RBP12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 PRRT2Q7Z6L0 340 aaPredicted RBP12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 FOXP4Q8IVH2 680 aaPredicted RBP12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 MIGA1Q8NAN2 632 aa12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 CD99L2Q8TCZ2 262 aa12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 DNAJC2Q99543 621 aaKnown RBP12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 TBC1D2Q9BYX2 928 aa12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 EFCC1Q9HA90 598 aa12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 ZBTB47Q9UFB7 747 aaPredicted RBP12.75□□□□□ -0.37
SCAMP4-208ENST00000489554 FAM196BA6NMK8 535 aa12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 GOLIM4O00461 696 aa12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 HLA-DOAP06340 250 aa12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 SLURP2P0DP57 97 aa12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 CAP2P40123 477 aa12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 DYNLL1P63167 89 aaKnown RBP12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 MOGSQ13724 837 aa12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 SLC9C2Q5TAH2 1124 aa12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 METTL16Q86W50 562 aaKnown RBP12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 PARK7Q99497 189 aaKnown RBP12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 MYO5AQ9Y4I1 1855 aaKnown RBP12.74□□□□□ -0.37
SCAMP4-208ENST00000489554 PDE6AP16499 860 aa12.73□□□□□ -0.37
SCAMP4-208ENST00000489554 USP5P45974 858 aa12.73□□□□□ -0.37
SCAMP4-208ENST00000489554 KIF22Q14807 665 aa12.73□□□□□ -0.37
SCAMP4-208ENST00000489554 BMP2KLQ5H9B9 411 aa12.73□□□□□ -0.37
SCAMP4-208ENST00000489554 CRACR2BQ8N4Y2 399 aaPredicted RBP12.73□□□□□ -0.37
SCAMP4-208ENST00000489554 GINM1Q9NU53 330 aa12.73□□□□□ -0.37
SCAMP4-208ENST00000489554 PAG1Q9NWQ8 432 aa12.73□□□□□ -0.37
SCAMP4-208ENST00000489554 PALD1Q9ULE6 856 aa12.73□□□□□ -0.37
SCAMP4-208ENST00000489554 SLC45A1Q9Y2W3 748 aa12.73□□□□□ -0.37
SCAMP4-208ENST00000489554 DOCK1Q14185 1865 aa12.73□□□□□ -0.37
SCAMP4-208ENST00000489554 MAGEB6P1A0A0J9YX57 407 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 TRIM75PA6NK02 468 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 USP17L5A8MUK1 530 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 GLRX3O76003 335 aaKnown RBP12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 ASNSP08243 561 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 GPAT2Q6NUI2 795 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 C17orf99Q6UX52 265 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 GADL1Q6ZQY3 521 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 ZNF280CQ8ND82 737 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 HAUS7Q99871 368 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 RIOK1Q9BRS2 568 aaKnown RBP12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 BOLA2Q9H3K6 86 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 AS3MTQ9HBK9 375 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 SAP30BPQ9UHR5 308 aaKnown RBP12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 PTPN22Q9Y2R2 807 aa12.72□□□□□ -0.37
SCAMP4-208ENST00000489554 ADGRA2Q96PE1 1338 aa12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 ZNF532Q9HCE3 1301 aa12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 GNRH1P01148 92 aa12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 SDSP20132 328 aa12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 LACTBP83111 547 aaPredicted RBP12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 MLLT1Q03111 559 aaPredicted RBP12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 TTC6Q86TZ1 520 aa12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 PROCA1Q8NCQ7 364 aaPredicted RBP12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 GPATCH3Q96I76 525 aa12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 CRNKL1Q9BZJ0 848 aaKnown RBP12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 EHD4Q9H223 541 aa12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 DNAJC18Q9H819 358 aa12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms