RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 ST3GAL1Q11201 340 aa15.12■□□□□ 0.01
TOP3A-206ENST00000489131 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
TOP3A-206ENST00000489131 TTC6Q86TZ1 520 aa15.12■□□□□ 0.01
TOP3A-206ENST00000489131 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
TOP3A-206ENST00000489131 BRF1Q92994 677 aa15.12■□□□□ 0.01
TOP3A-206ENST00000489131 CHMP4CQ96CF2 233 aa15.12■□□□□ 0.01
TOP3A-206ENST00000489131 PRMT6Q96LA8 375 aaPredicted RBP15.12■□□□□ 0.01
TOP3A-206ENST00000489131 DHX36Q9H2U1 1008 aaKnown RBP15.12■□□□□ 0.01
TOP3A-206ENST00000489131 ZNF287Q9HBT7 754 aa15.12■□□□□ 0.01
TOP3A-206ENST00000489131 FAM198AQ9UFP1 575 aa15.12■□□□□ 0.01
TOP3A-206ENST00000489131 PLIN4Q96Q06 1357 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 LARGE1O95461 756 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 POLR3DP05423 398 aaPredicted RBP15.11■□□□□ 0.01
TOP3A-206ENST00000489131 PLCD1P51178 756 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 ARHGAP27Q6ZUM4 889 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 TMTC2Q8N394 836 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 GTF3C6Q969F1 213 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 LY9Q9HBG7 655 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 INCENPQ9NQS7 918 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 TCP11L1Q9NUJ3 509 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 ZBTB12Q9Y330 459 aaPredicted RBP15.11■□□□□ 0.01
TOP3A-206ENST00000489131 PCDHAC2Q9Y5I4 1007 aa15.11■□□□□ 0.01
TOP3A-206ENST00000489131 ZC3H4Q9UPT8 1303 aaKnown RBP15.11■□□□□ 0.01
TOP3A-206ENST00000489131 EVX2Q03828 476 aa15.1■□□□□ 0.01
TOP3A-206ENST00000489131 NFIAQ12857 509 aa15.1■□□□□ 0.01
TOP3A-206ENST00000489131 SART3Q15020 963 aaKnown RBP15.1■□□□□ 0.01
TOP3A-206ENST00000489131 DLGAP5Q15398 846 aa15.1■□□□□ 0.01
TOP3A-206ENST00000489131 SEC23AQ15436 765 aa15.1■□□□□ 0.01
TOP3A-206ENST00000489131 GPC2Q8N158 579 aa15.1■□□□□ 0.01
TOP3A-206ENST00000489131 ANKS1AQ92625 1134 aa15.1■□□□□ 0.01
TOP3A-206ENST00000489131 SWAP70Q9UH65 585 aa15.1■□□□□ 0.01
TOP3A-206ENST00000489131 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-206ENST00000489131 ZNF541Q9H0D2 1346 aa15.1■□□□□ 0.01
TOP3A-206ENST00000489131 GREB1LQ9C091 1923 aaPredicted RBP15.09■□□□□ 0.01
TOP3A-206ENST00000489131 HSP90AA1P07900 732 aaKnown RBP15.09■□□□□ 0.01
TOP3A-206ENST00000489131 PDIA3P30101 505 aaKnown RBP15.09■□□□□ 0.01
TOP3A-206ENST00000489131 NOVP48745 357 aa15.09■□□□□ 0.01
TOP3A-206ENST00000489131 RBM5P52756 815 aaKnown RBP eCLIP15.09■□□□□ 0.01
TOP3A-206ENST00000489131 FGD1P98174 961 aa15.09■□□□□ 0.01
TOP3A-206ENST00000489131 CCDC178Q5BJE1 867 aa15.09■□□□□ 0.01
TOP3A-206ENST00000489131 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
TOP3A-206ENST00000489131 FAM83AQ86UY5 434 aa15.09■□□□□ 0.01
TOP3A-206ENST00000489131 LLPHQ9BRT6 129 aaKnown RBP15.09■□□□□ 0.01
TOP3A-206ENST00000489131 LRRC2Q9BYS8 371 aa15.09■□□□□ 0.01
TOP3A-206ENST00000489131 TDRD3Q9H7E2 651 aaKnown RBP15.09■□□□□ 0.01
TOP3A-206ENST00000489131 MYOZ2Q9NPC6 264 aa15.09■□□□□ 0.01
TOP3A-206ENST00000489131 CHMP5Q9NZZ3 219 aa15.09■□□□□ 0.01
TOP3A-206ENST00000489131 PDIA4P13667 645 aaKnown RBP15.08■□□□□ 0
TOP3A-206ENST00000489131 RASA1P20936 1047 aa15.08■□□□□ 0
TOP3A-206ENST00000489131 CDK8P49336 464 aa15.08■□□□□ 0
TOP3A-206ENST00000489131 GMPSP49915 693 aaPredicted RBP15.08■□□□□ 0
TOP3A-206ENST00000489131 APOBRQ0VD83 1088 aa15.08■□□□□ 0
TOP3A-206ENST00000489131 TMEM67Q5HYA8 995 aa15.08■□□□□ 0
TOP3A-206ENST00000489131 IQCA1Q86XH1 822 aa15.08■□□□□ 0
TOP3A-206ENST00000489131 ZSCAN10Q96SZ4 725 aaPredicted RBP15.08■□□□□ 0
TOP3A-206ENST00000489131 ZNF70Q9UC06 446 aaPredicted RBP15.08■□□□□ 0
TOP3A-206ENST00000489131 SAP30BPQ9UHR5 308 aaKnown RBP15.08■□□□□ 0
TOP3A-206ENST00000489131 SERPINB13Q9UIV8 391 aa15.08■□□□□ 0
TOP3A-206ENST00000489131 BRPF3Q9ULD4 1205 aa15.08■□□□□ 0
TOP3A-206ENST00000489131 HPS5Q9UPZ3 1129 aa15.08■□□□□ 0
TOP3A-206ENST00000489131 WNT10BO00744 389 aa15.07■□□□□ 0
TOP3A-206ENST00000489131 IFIT3O14879 490 aaKnown RBP15.07■□□□□ 0
TOP3A-206ENST00000489131 HLA-DOAP06340 250 aa15.07■□□□□ 0
TOP3A-206ENST00000489131 PICALMQ13492 652 aa15.07■□□□□ 0
TOP3A-206ENST00000489131 RRP12Q5JTH9 1297 aaKnown RBP15.07■□□□□ 0
TOP3A-206ENST00000489131 APOA5Q6Q788 366 aa15.07■□□□□ 0
TOP3A-206ENST00000489131 NOL8Q76FK4 1167 aaKnown RBP15.07■□□□□ 0
TOP3A-206ENST00000489131 FOXP4Q8IVH2 680 aaPredicted RBP15.07■□□□□ 0
TOP3A-206ENST00000489131 ENAHQ8N8S7 591 aaPredicted RBP15.07■□□□□ 0
TOP3A-206ENST00000489131 DYNLL2Q96FJ2 89 aa15.07■□□□□ 0
TOP3A-206ENST00000489131 UBAC1Q9BSL1 405 aa15.07■□□□□ 0
TOP3A-206ENST00000489131 SLKQ9H2G2 1235 aaPredicted RBP15.07■□□□□ 0
TOP3A-206ENST00000489131 GPHNQ9NQX3 736 aaPredicted RBP15.07■□□□□ 0
TOP3A-206ENST00000489131 TMOD2Q9NZR1 351 aa15.07■□□□□ 0
TOP3A-206ENST00000489131 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
TOP3A-206ENST00000489131 TNKSO95271 1327 aa15.07■□□□□ 0
TOP3A-206ENST00000489131 CNTNAP1P78357 1384 aa15.07■□□□□ 0
TOP3A-206ENST00000489131 ERICH2A1L162 156 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 MYO1BO43795 1136 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 RANBP6O60518 1105 aaKnown RBP15.06■□□□□ 0
TOP3A-206ENST00000489131 SCRN1Q12765 414 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 WTAPQ15007 396 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 PPP2R5BQ15173 497 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 SH3BP5LQ7L8J4 393 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 DGKHQ86XP1 1220 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 CCDC83Q8IWF9 413 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 MICALL2Q8IY33 904 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 RGS22Q8NE09 1264 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 NEDD1Q8NHV4 660 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 SMARCC2Q8TAQ2 1214 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 FAM151AQ8WW52 585 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 LARP6Q9BRS8 491 aaKnown RBP15.06■□□□□ 0
TOP3A-206ENST00000489131 TOMM22Q9NS69 142 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 PGAP2Q9UHJ9 254 aa15.06■□□□□ 0
TOP3A-206ENST00000489131 KLF18A0A0U1RQI7 1052 aa15.05■□□□□ -0
TOP3A-206ENST00000489131 DHX16O60231 1041 aaKnown RBP15.05■□□□□ -0
TOP3A-206ENST00000489131 GRIN3BO60391 1043 aa15.05■□□□□ -0
TOP3A-206ENST00000489131 PRDM1O75626 825 aa15.05■□□□□ -0
TOP3A-206ENST00000489131 SHMT1P34896 483 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms