RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 PDE4BQ07343 736 aa6.64□□□□□ -1.35
SSR1-209ENST00000488834 SHKBP1Q8TBC3 707 aa6.64□□□□□ -1.35
SSR1-209ENST00000488834 GATAD2BQ8WXI9 593 aa6.64□□□□□ -1.35
SSR1-209ENST00000488834 ZNF428Q96B54 188 aa6.64□□□□□ -1.35
SSR1-209ENST00000488834 RHOVQ96L33 236 aa6.64□□□□□ -1.35
SSR1-209ENST00000488834 KIAA1522Q9P206 1035 aaPredicted RBP6.64□□□□□ -1.35
SSR1-209ENST00000488834 SUPT16HQ9Y5B9 1047 aaKnown RBP6.64□□□□□ -1.35
SSR1-209ENST00000488834 DYNC1LI2O43237 492 aaPredicted RBP6.63□□□□□ -1.35
SSR1-209ENST00000488834 CYP27A1Q02318 531 aa6.63□□□□□ -1.35
SSR1-209ENST00000488834 CDK5R2Q13319 367 aa6.63□□□□□ -1.35
SSR1-209ENST00000488834 DUSP27Q5VZP5 1158 aa6.63□□□□□ -1.35
SSR1-209ENST00000488834 CYFIP1Q7L576 1253 aa6.63□□□□□ -1.35
SSR1-209ENST00000488834 ZAR1Q86SH2 424 aa6.63□□□□□ -1.35
SSR1-209ENST00000488834 TLR3O15455 904 aaKnown RBP6.62□□□□□ -1.35
SSR1-209ENST00000488834 PGRP06401 933 aa6.62□□□□□ -1.35
SSR1-209ENST00000488834 GRK4P32298 578 aa6.62□□□□□ -1.35
SSR1-209ENST00000488834 CWF19L2Q2TBE0 894 aaKnown RBP6.62□□□□□ -1.35
SSR1-209ENST00000488834 LDLRAD1Q5T700 205 aa6.62□□□□□ -1.35
SSR1-209ENST00000488834 ZNF296Q8WUU4 475 aaPredicted RBP6.62□□□□□ -1.35
SSR1-209ENST00000488834 SPON2Q9BUD6 331 aa6.62□□□□□ -1.35
SSR1-209ENST00000488834 METTL22Q9BUU2 404 aaPredicted RBP6.62□□□□□ -1.35
SSR1-209ENST00000488834 WNT10AQ9GZT5 417 aa6.62□□□□□ -1.35
SSR1-209ENST00000488834 LEMD3Q9Y2U8 911 aa6.62□□□□□ -1.35
SSR1-209ENST00000488834 PCDHGB7Q9Y5F8 929 aa6.62□□□□□ -1.35
SSR1-209ENST00000488834 CILPO75339 1184 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 F13BP05160 661 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 FAM87AP0C7U9 286 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 ADMP35318 185 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 GRIK1P39086 918 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 RING1Q06587 406 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 CYP27C1Q4G0S4 372 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 ZNF394Q53GI3 561 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 C9orf131Q5VYM1 1079 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 FBXL19Q6PCT2 694 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 FAM196AQ6ZSG2 479 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 KIAA0825Q8IV33 1275 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 HID1Q8IV36 788 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 SHISA5Q8N114 240 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 C1GALT1Q9NS00 363 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 TACC3Q9Y6A5 838 aa6.61□□□□□ -1.35
SSR1-209ENST00000488834 SCO2A0A1W2PP80 73 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 FAM170BA6NMN3 283 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 E9PSI1 815 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 GFRA2O00451 464 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 PLCG1P19174 1290 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 APOBRQ0VD83 1088 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 MPP2Q14168 576 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 ARHGAP27Q6ZUM4 889 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 ARMCX6Q7L4S7 300 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 ZDHHC13Q8IUH4 622 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 LRRC4CQ9HCJ2 640 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 ADAMTS1Q9UHI8 967 aa6.6□□□□□ -1.35
SSR1-209ENST00000488834 FAM221AA4D161 298 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 GRIN3BO60391 1043 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 MED26O95402 600 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 TGFB1P01137 390 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 MCM4P33991 863 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 NTF4P34130 210 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 MLECQ14165 292 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 CPSF6Q16630 551 aaKnown RBP eCLIP6.59□□□□□ -1.353e-9■■□□□ 12.8
SSR1-209ENST00000488834 OGFOD3Q6PK18 319 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 SEZ6L2Q6UXD5 910 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 ZNF765Q7L2R6 523 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 REC114Q7Z4M0 266 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 NT5DC4Q86YG4 428 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 ZNF654Q8IZM8 581 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 TOP6BLQ8N6T0 577 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 FBXO27Q8NI29 283 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 PIM2Q9P1W9 311 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 RNF112Q9ULX5 631 aa6.59□□□□□ -1.35
SSR1-209ENST00000488834 ROBO2Q9HCK4 1378 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 CYP26A1O43174 497 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 LRIG2O94898 1065 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 GARTP22102 1010 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 HDLBPQ00341 1268 aaKnown RBP6.58□□□□□ -1.36
SSR1-209ENST00000488834 SEZ6Q53EL9 994 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 UBE3DQ7Z6J8 389 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 XAGE3Q8WTP9 111 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 FOXQ1Q9C009 403 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 FBRSQ9HAH7 460 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 PRDM10Q9NQV6 1147 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 UBP1Q9NZI7 540 aa6.58□□□□□ -1.36
SSR1-209ENST00000488834 COBLO75128 1261 aa6.57□□□□□ -1.36
SSR1-209ENST00000488834 NKD1Q969G9 470 aa6.57□□□□□ -1.36
SSR1-209ENST00000488834 MIPEPQ99797 713 aa6.57□□□□□ -1.36
SSR1-209ENST00000488834 DUSP23Q9BVJ7 150 aa6.57□□□□□ -1.36
SSR1-209ENST00000488834 CCSER2Q9H7U1 834 aa6.57□□□□□ -1.36
SSR1-209ENST00000488834 KLHL3Q9UH77 587 aa6.57□□□□□ -1.36
SSR1-209ENST00000488834 DDX41Q9UJV9 622 aaKnown RBP6.57□□□□□ -1.36
SSR1-209ENST00000488834 ADAM30Q9UKF2 790 aa6.57□□□□□ -1.36
SSR1-209ENST00000488834 CORINQ9Y5Q5 1042 aa6.57□□□□□ -1.36
SSR1-209ENST00000488834 GREM1O60565 184 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 LEFTY1O75610 366 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 TCF3P15923 654 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 SSTR4P31391 388 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 YARSP54577 528 aaKnown RBP6.56□□□□□ -1.36
SSR1-209ENST00000488834 CHMP4BP1P59074 171 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 NKG7Q16617 165 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 ARTNQ5T4W7 220 aa6.56□□□□□ -1.36
SSR1-209ENST00000488834 PRAMEF13Q5VWM6 474 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms