RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 TRIM43BA6NCK2 446 aa10.62□□□□□ -0.71
APTX-228ENST00000486724 TRIM75PA6NK02 468 aa10.62□□□□□ -0.71
APTX-228ENST00000486724 MSCO60682 206 aa10.62□□□□□ -0.71
APTX-228ENST00000486724 EPHB4P54760 987 aa10.62□□□□□ -0.71
APTX-228ENST00000486724 TRIM60Q495X7 471 aa10.62□□□□□ -0.71
APTX-228ENST00000486724 TREML2Q5T2D2 321 aa10.62□□□□□ -0.71
APTX-228ENST00000486724 APOBEC3HQ6NTF7 200 aaKnown RBP10.62□□□□□ -0.71
APTX-228ENST00000486724 UBE3BQ7Z3V4 1068 aa10.62□□□□□ -0.71
APTX-228ENST00000486724 TRIM43Q96BQ3 446 aaPredicted RBP10.62□□□□□ -0.71
APTX-228ENST00000486724 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
APTX-228ENST00000486724 PHIPQ8WWQ0 1821 aa10.62□□□□□ -0.71
APTX-228ENST00000486724 C5orf42Q9H799 3197 aa10.62□□□□□ -0.71
APTX-228ENST00000486724 DOCK2Q92608 1830 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 ANKRD18BA2A2Z9 1011 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 IGKV5-2P06315 115 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 HIBADHP31937 336 aaKnown RBP10.61□□□□□ -0.71
APTX-228ENST00000486724 PABPC4Q13310 644 aaKnown RBP eCLIP10.61□□□□□ -0.71
APTX-228ENST00000486724 SNX17Q15036 470 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 GRIK5Q16478 980 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 SLC39A5Q6ZMH5 540 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 SH3RF1Q7Z6J0 888 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 CCDC146Q8IYE0 955 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 PROCA1Q8NCQ7 364 aaPredicted RBP10.61□□□□□ -0.71
APTX-228ENST00000486724 TBC1D22AQ8WUA7 517 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 KHSRPQ92945 711 aaKnown RBP eCLIP10.61□□□□□ -0.71
APTX-228ENST00000486724 APBA2Q99767 749 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 MRIQ9BWK5 157 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 PLA2G12BQ9BX93 195 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 KCNH6Q9H252 994 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 MORF4L1Q9UBU8 362 aa10.61□□□□□ -0.71
APTX-228ENST00000486724 DDX20Q9UHI6 824 aaKnown RBP10.61□□□□□ -0.71
APTX-228ENST00000486724 MAST3O60307 1309 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 PLXNA1Q9UIW2 1896 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 PHF20L1A8MW92 1017 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 PI4K2BG5E9Z4 385 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 ERC2O15083 957 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 CSF1RP07333 972 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 RGS2P41220 211 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 FPGSQ05932 587 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 NEXNQ0ZGT2 675 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 TCP10Q12799 353 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 CCL14Q16627 93 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 DUSP27Q5VZP5 1158 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 CCDC129Q6ZRS4 1044 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 PBX4Q9BYU1 374 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 MAP3K2Q9Y2U5 619 aa10.6□□□□□ -0.71
APTX-228ENST00000486724 LAS1LQ9Y4W2 734 aaKnown RBP10.6□□□□□ -0.71
APTX-228ENST00000486724 KBTBD13C9JR72 458 aa10.59□□□□□ -0.71
APTX-228ENST00000486724 ST18O60284 1047 aa10.59□□□□□ -0.71
APTX-228ENST00000486724 PBX2P40425 430 aa10.59□□□□□ -0.71
APTX-228ENST00000486724 GYG1P46976 350 aa10.59□□□□□ -0.71
APTX-228ENST00000486724 MICALL1Q8N3F8 863 aa10.59□□□□□ -0.71
APTX-228ENST00000486724 USP6NLQ92738 828 aa10.59□□□□□ -0.71
APTX-228ENST00000486724 DAGLAQ9Y4D2 1042 aa10.59□□□□□ -0.71
APTX-228ENST00000486724 TACC3Q9Y6A5 838 aa10.59□□□□□ -0.71
APTX-228ENST00000486724 ATRNL1Q5VV63 1379 aa10.59□□□□□ -0.71
APTX-228ENST00000486724 UTYO14607 1347 aa10.58□□□□□ -0.71
APTX-228ENST00000486724 ZNF521Q96K83 1311 aa10.58□□□□□ -0.71
APTX-228ENST00000486724 H7C1W4 665 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 APAF1O14727 1248 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 PLIN1O60240 522 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 RAG1P15918 1043 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 ITGB8P26012 769 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 MAPK4P31152 587 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 CHAF1AQ13111 956 aaPredicted RBP10.58□□□□□ -0.72
APTX-228ENST00000486724 SKIV2LQ15477 1246 aaKnown RBP10.58□□□□□ -0.72
APTX-228ENST00000486724 CWF19L2Q2TBE0 894 aaKnown RBP10.58□□□□□ -0.72
APTX-228ENST00000486724 C1orf53Q5VUE5 145 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 MFSD14CQ5VZR4 134 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 HHIPL2Q6UWX4 724 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 ARRDC4Q8NCT1 418 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 HERVK_113Q902F9 699 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 FAM84BQ96KN1 310 aaPredicted RBP10.58□□□□□ -0.72
APTX-228ENST00000486724 FBXL18Q96ME1 805 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 UIMC1Q96RL1 719 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 ASCC2Q9H1I8 757 aaPredicted RBP10.58□□□□□ -0.72
APTX-228ENST00000486724 LRRFIP2Q9Y608 721 aaKnown RBP10.58□□□□□ -0.72
APTX-228ENST00000486724 MYO9BQ13459 2157 aa10.58□□□□□ -0.72
APTX-228ENST00000486724 NEURL1BA8MQ27 555 aa10.57□□□□□ -0.72
APTX-228ENST00000486724 CLTBP09497 229 aa10.57□□□□□ -0.72
APTX-228ENST00000486724 CNGA1P29973 690 aa10.57□□□□□ -0.72
APTX-228ENST00000486724 IFIT5Q13325 482 aaKnown RBP10.57□□□□□ -0.72
APTX-228ENST00000486724 RAB30Q15771 203 aa10.57□□□□□ -0.72
APTX-228ENST00000486724 GJC2Q5T442 439 aaPredicted RBP10.57□□□□□ -0.72
APTX-228ENST00000486724 KIAA0355O15063 1070 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 TLL1O43897 1013 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 CTNND1O60716 968 aaKnown RBP10.56□□□□□ -0.72
APTX-228ENST00000486724 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
APTX-228ENST00000486724 TMPOP42166 694 aaKnown RBP10.56□□□□□ -0.72
APTX-228ENST00000486724 TLE2Q04725 743 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 NFIAQ12857 509 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 UBE4AQ14139 1066 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 MORN1Q5T089 497 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 KSR2Q6VAB6 950 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 VPS37DQ86XT2 251 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 CCAR1Q8IX12 1150 aaKnown RBP10.56□□□□□ -0.72
APTX-228ENST00000486724 GPRC5AQ8NFJ5 357 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 MSRAQ9UJ68 235 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms