RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SH3RF3Q8TEJ3 882 aaPredicted RBP12.92□□□□□ -0.34
DDX56-212ENST00000485367 ATRNL1Q5VV63 1379 aa12.92□□□□□ -0.34
DDX56-212ENST00000485367 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
DDX56-212ENST00000485367 PHF20L1A8MW92 1017 aa12.91□□□□□ -0.34
DDX56-212ENST00000485367 HSP90AA1P07900 732 aaKnown RBP12.91□□□□□ -0.34
DDX56-212ENST00000485367 SLURP2P0DP57 97 aa12.91□□□□□ -0.34
DDX56-212ENST00000485367 NOL9Q5SY16 702 aaKnown RBP12.91□□□□□ -0.34
DDX56-212ENST00000485367 ZFYVE28Q9HCC9 887 aa12.91□□□□□ -0.34
DDX56-212ENST00000485367 AATFQ9NY61 560 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDX56-212ENST00000485367 BTBD19C9JJ37 291 aa12.9□□□□□ -0.34
DDX56-212ENST00000485367 NPM3O75607 178 aaKnown RBP12.9□□□□□ -0.34
DDX56-212ENST00000485367 BAG3O95817 575 aa12.9□□□□□ -0.34
DDX56-212ENST00000485367 ERO1AQ96HE7 468 aa12.9□□□□□ -0.34
DDX56-212ENST00000485367 PICK1Q9NRD5 415 aa12.9□□□□□ -0.34
DDX56-212ENST00000485367 HPS5Q9UPZ3 1129 aa12.9□□□□□ -0.34
DDX56-212ENST00000485367 NDUFB9Q9Y6M9 179 aa12.9□□□□□ -0.34
DDX56-212ENST00000485367 IDH1O75874 414 aaKnown RBP12.89□□□□□ -0.35
DDX56-212ENST00000485367 SP3Q02447 781 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 ADGRA1Q86SQ6 560 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 SCYL3Q8IZE3 742 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 CLASRPQ8N2M8 674 aaKnown RBP12.89□□□□□ -0.35
DDX56-212ENST00000485367 CD99L2Q8TCZ2 262 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 OSBPL5Q9H0X9 879 aaPredicted RBP12.89□□□□□ -0.35
DDX56-212ENST00000485367 TRIM17Q9Y577 477 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 FAM196BA6NMK8 535 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 TRAK2O60296 914 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 IFIT2P09913 472 aaKnown RBP12.89□□□□□ -0.35
DDX56-212ENST00000485367 PLCG2P16885 1265 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 CYP7A1P22680 504 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 PPP4CP60510 307 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 MAP3K10Q02779 954 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 FBXO46Q6PJ61 603 aaPredicted RBP12.89□□□□□ -0.35
DDX56-212ENST00000485367 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
DDX56-212ENST00000485367 KCNH4Q9UQ05 1017 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 ZHX2Q9Y6X8 837 aa12.89□□□□□ -0.35
DDX56-212ENST00000485367 RAB11FIP3O75154 756 aa12.88□□□□□ -0.35
DDX56-212ENST00000485367 OTOP1Q7RTM1 612 aa12.88□□□□□ -0.35
DDX56-212ENST00000485367 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.88□□□□□ -0.35
DDX56-212ENST00000485367 CXCL11O14625 94 aa12.87□□□□□ -0.35
DDX56-212ENST00000485367 TBC1D12O60347 775 aa12.87□□□□□ -0.35
DDX56-212ENST00000485367 CTNND1O60716 968 aaKnown RBP12.87□□□□□ -0.35
DDX56-212ENST00000485367 IGSF3O75054 1194 aa12.87□□□□□ -0.35
DDX56-212ENST00000485367 PTPRAP18433 802 aa12.87□□□□□ -0.35
DDX56-212ENST00000485367 SOX10P56693 466 aa12.87□□□□□ -0.35
DDX56-212ENST00000485367 MAPKAPK5Q8IW41 473 aa12.87□□□□□ -0.35
DDX56-212ENST00000485367 MAGEB6Q8N7X4 407 aa12.87□□□□□ -0.35
DDX56-212ENST00000485367 TGFBRAP1Q8WUH2 860 aa12.87□□□□□ -0.35
DDX56-212ENST00000485367 ZCCHC17Q9NP64 241 aaKnown RBP12.87□□□□□ -0.35
DDX56-212ENST00000485367 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
DDX56-212ENST00000485367 DOCK1Q14185 1865 aa12.87□□□□□ -0.35
DDX56-212ENST00000485367 CDK5RAP2Q96SN8 1893 aa12.87□□□□□ -0.35
DDX56-212ENST00000485367 COL2A1P02458 1487 aaPredicted RBP12.87□□□□□ -0.35
DDX56-212ENST00000485367 PDHXO00330 501 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 DYNLL1P63167 89 aaKnown RBP12.86□□□□□ -0.35
DDX56-212ENST00000485367 MAP3K12Q12852 859 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 ANKRD23Q86SG2 305 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 MIGA1Q8NAN2 632 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 C22orf23Q9BZE7 217 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 EFCC1Q9HA90 598 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 TLR2O60603 784 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 FGD1P98174 961 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 MOGSQ13724 837 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 SKOR2Q2VWA4 1001 aaPredicted RBP12.86□□□□□ -0.35
DDX56-212ENST00000485367 GRPEL1Q9HAV7 217 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.86□□□□□ -0.35
DDX56-212ENST00000485367 PI4KBQ9UBF8 816 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 SAP30BPQ9UHR5 308 aaKnown RBP12.86□□□□□ -0.35
DDX56-212ENST00000485367 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
DDX56-212ENST00000485367 FOCADQ5VW36 1801 aa12.85□□□□□ -0.35
DDX56-212ENST00000485367 TPM2P07951 284 aa12.85□□□□□ -0.35
DDX56-212ENST00000485367 RGS19P49795 217 aa12.85□□□□□ -0.35
DDX56-212ENST00000485367 CAP1Q01518 475 aa12.85□□□□□ -0.35
DDX56-212ENST00000485367 MLLT1Q03111 559 aaPredicted RBP12.85□□□□□ -0.35
DDX56-212ENST00000485367 CCDC84Q86UT8 332 aaPredicted RBP12.85□□□□□ -0.35
DDX56-212ENST00000485367 HSCBQ8IWL3 235 aa12.85□□□□□ -0.35
DDX56-212ENST00000485367 SNX21Q969T3 373 aa12.85□□□□□ -0.35
DDX56-212ENST00000485367 DNAJC2Q99543 621 aaKnown RBP12.85□□□□□ -0.35
DDX56-212ENST00000485367 DHX36Q9H2U1 1008 aaKnown RBP12.85□□□□□ -0.35
DDX56-212ENST00000485367 AFG3L2Q9Y4W6 797 aa12.85□□□□□ -0.35
DDX56-212ENST00000485367 FLT1P17948 1338 aa12.85□□□□□ -0.35
DDX56-212ENST00000485367 TRIM75PA6NK02 468 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 ESPNB1AK53 854 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 GOLIM4O00461 696 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 ARHGEF6Q15052 776 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
DDX56-212ENST00000485367 GADL1Q6ZQY3 521 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
DDX56-212ENST00000485367 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 CPA4Q9UI42 421 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 HERC5Q9UII4 1024 aaKnown RBP12.84□□□□□ -0.35
DDX56-212ENST00000485367 PALD1Q9ULE6 856 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 PTPN22Q9Y2R2 807 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 PHIPQ8WWQ0 1821 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 ATAD5Q96QE3 1844 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 A0A0G2JLL6 359 aaPredicted RBP12.84□□□□□ -0.35
DDX56-212ENST00000485367 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
DDX56-212ENST00000485367 USP5P45974 858 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 RRP1BQ14684 758 aaKnown RBP12.84□□□□□ -0.35
DDX56-212ENST00000485367 SLC4A8Q2Y0W8 1093 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms