RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 BCL7CQ8WUZ0 217 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-213ENST00000484088 TINF2Q9BSI4 451 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 DUSP23Q9BVJ7 150 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 FBRSQ9HAH7 460 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 ADAMTS6Q9UKP5 1117 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 AKAP2Q9Y2D5 859 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 LEMD3Q9Y2U8 911 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 PCDHGB7Q9Y5F8 929 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 CSADQ9Y600 493 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 CYP26A1O43174 497 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 EOMESO95936 686 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 WNT11O96014 354 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 FAM87AP0C7U9 286 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 ITGB5P18084 799 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 CPSF6Q16630 551 aaKnown RBP eCLIP3.84□□□□□ -1.79
ITGB1-213ENST00000484088 LRFN4Q6PJG9 635 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 SV2BQ7L1I2 683 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 C12orf40Q86WS4 652 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 SMYD4Q8IYR2 804 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-213ENST00000484088 RNF214Q8ND24 703 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 PHC3Q8NDX5 983 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 KCNB2Q92953 911 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 RNF34Q969K3 372 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 RSRP1Q9BUV0 290 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 OSBPL1AQ9BXW6 950 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 ACBD3Q9H3P7 528 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 RAD18Q9NS91 495 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 KBTBD4Q9NVX7 518 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 ADAMTS1Q9UHI8 967 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 GPN3Q9UHW5 284 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-213ENST00000484088 CARMIL2Q6F5E8 1435 aa3.84□□□□□ -1.79
ITGB1-213ENST00000484088 DCDC2CA8MYV0 355 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 F6X3S4 739 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 GFRA2O00451 464 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 TFE3P19532 575 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-213ENST00000484088 TNNI2P48788 182 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 MAP7Q14244 749 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 SLBPQ14493 270 aaKnown RBP eCLIP3.83□□□□□ -1.8
ITGB1-213ENST00000484088 CCDC85BQ15834 202 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-213ENST00000484088 NKG7Q16617 165 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 ZBTB37Q5TC79 503 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 PCNX4Q63HM2 1172 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 AGMOQ6ZNB7 445 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 CYFIP1Q7L576 1253 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 C8orf37Q96NL8 207 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 TGIF2Q9GZN2 237 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 TNKS2Q9H2K2 1166 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 ATG3Q9NT62 314 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 TTF2Q9UNY4 1162 aaKnown RBP3.83□□□□□ -1.8
ITGB1-213ENST00000484088 TLR6Q9Y2C9 796 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 PCDHB5Q9Y5E4 795 aa3.83□□□□□ -1.8
ITGB1-213ENST00000484088 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-213ENST00000484088 GREM1O60565 184 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 TRIM37O94972 964 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 PAPLNO95428 1278 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 CD8BP10966 210 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 ERCC5P28715 1186 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-213ENST00000484088 GRIK1P39086 918 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 LIG3P49916 1009 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 NKPD1Q17RQ9 610 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 FBXL19Q6PCT2 694 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 HS2ST1Q7LGA3 356 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 RIN3Q8TB24 985 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 TMEM74Q96NL1 305 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 METTL22Q9BUU2 404 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-213ENST00000484088 ATXN3LQ9H3M9 355 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 LRRC4CQ9HCJ2 640 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 BSDC1Q9NW68 430 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-213ENST00000484088 GGT7Q9UJ14 662 aa3.82□□□□□ -1.8
ITGB1-213ENST00000484088 FAM221AA4D161 298 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 PRR33A8MZF0 331 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 EIF4EBP3O60516 100 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-213ENST00000484088 SLITRK5O94991 958 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 ITGAEP38570 1179 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 CRKP46108 304 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 GJA8P48165 433 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 RPS26P62854 115 aaKnown RBP3.81□□□□□ -1.8
ITGB1-213ENST00000484088 USP48Q86UV5 1035 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 VSIG10LQ86VR7 867 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 SPACA3Q8IXA5 215 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 EAF1Q96JC9 268 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-213ENST00000484088 CEP44Q9C0F1 390 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 ZFYVE1Q9HBF4 777 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 MBNL3Q9NUK0 354 aaKnown RBP3.81□□□□□ -1.8
ITGB1-213ENST00000484088 PPP4R2Q9NY27 417 aa3.81□□□□□ -1.8
ITGB1-213ENST00000484088 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-213ENST00000484088 IGSF3O75054 1194 aa3.8□□□□□ -1.8
ITGB1-213ENST00000484088 PF4P02776 101 aa3.8□□□□□ -1.8
ITGB1-213ENST00000484088 SLFN14P0C7P3 912 aa3.8□□□□□ -1.8
ITGB1-213ENST00000484088 ZC3H6P61129 1189 aaKnown RBP3.8□□□□□ -1.8
ITGB1-213ENST00000484088 PPP2R3AQ06190 1150 aa3.8□□□□□ -1.8
ITGB1-213ENST00000484088 CAMK2GQ13555 558 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-213ENST00000484088 MAP3K11Q16584 847 aa3.8□□□□□ -1.8
ITGB1-213ENST00000484088 TTBK2Q6IQ55 1244 aa3.8□□□□□ -1.8
ITGB1-213ENST00000484088 TOP6BLQ8N6T0 577 aa3.8□□□□□ -1.8
ITGB1-213ENST00000484088 PLPPR2Q96GM1 343 aa3.8□□□□□ -1.8
ITGB1-213ENST00000484088 GMLQ99445 158 aa3.8□□□□□ -1.8
ITGB1-213ENST00000484088 PCOLCE2Q9UKZ9 415 aa3.8□□□□□ -1.8
ITGB1-213ENST00000484088 KRTAP4-8A0A0G2JLE6 195 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 F13A1P00488 732 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms