RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 OSBP2Q969R2 916 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 HOOK2Q96ED9 719 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 OTUD5Q96G74 571 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 MS4A4AQ96JQ5 239 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 PTPN18Q99952 460 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.78□□□□□ -0.044e-8■■■□□ 16.3
PTPRF-213ENST00000481019 R3HDMLQ9H3Y0 253 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 CSADQ9Y600 493 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 M0R2C6 588 aa14.77□□□□□ -0.05
PTPRF-213ENST00000481019 IGF2BP3O00425 579 aaKnown RBP eCLIP14.77□□□□□ -0.05
PTPRF-213ENST00000481019 ERC2O15083 957 aa14.77□□□□□ -0.05
PTPRF-213ENST00000481019 RNF113AO15541 343 aaKnown RBP14.77□□□□□ -0.05
PTPRF-213ENST00000481019 TBC1D12O60347 775 aa14.77□□□□□ -0.05
PTPRF-213ENST00000481019 TRPA1O75762 1119 aa14.77□□□□□ -0.05
PTPRF-213ENST00000481019 ZBTB48P10074 688 aaPredicted RBP14.77□□□□□ -0.05
PTPRF-213ENST00000481019 CYP2D6P10635 497 aa14.77□□□□□ -0.05
PTPRF-213ENST00000481019 NOL9Q5SY16 702 aaKnown RBP14.77□□□□□ -0.05
PTPRF-213ENST00000481019 COL13A1Q5TAT6 717 aaPredicted RBP14.77□□□□□ -0.05
PTPRF-213ENST00000481019 TMED8Q6PL24 325 aaPredicted RBP14.77□□□□□ -0.05
PTPRF-213ENST00000481019 AIDAQ96BJ3 306 aa14.77□□□□□ -0.05
PTPRF-213ENST00000481019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.77□□□□□ -0.05
PTPRF-213ENST00000481019 PHIPQ8WWQ0 1821 aa14.77□□□□□ -0.05
PTPRF-213ENST00000481019 DOCK1Q14185 1865 aa14.76□□□□□ -0.05
PTPRF-213ENST00000481019 IRF6O14896 467 aa14.76□□□□□ -0.05
PTPRF-213ENST00000481019 CTCFP49711 727 aaPredicted RBP14.76□□□□□ -0.05
PTPRF-213ENST00000481019 PLCD1P51178 756 aa14.76□□□□□ -0.05
PTPRF-213ENST00000481019 METTL16Q86W50 562 aaKnown RBP14.76□□□□□ -0.05
PTPRF-213ENST00000481019 BRI3BPQ8WY22 251 aa14.76□□□□□ -0.05
PTPRF-213ENST00000481019 SEC62Q99442 399 aaKnown RBP14.76□□□□□ -0.05
PTPRF-213ENST00000481019 ZBTB47Q9UFB7 747 aaPredicted RBP14.76□□□□□ -0.05
PTPRF-213ENST00000481019 BAZ2AQ9UIF9 1905 aaKnown RBP14.76□□□□□ -0.05
PTPRF-213ENST00000481019 CYP2D7A0A087X1C5 515 aa14.75□□□□□ -0.05
PTPRF-213ENST00000481019 TESPA1A2RU30 521 aaPredicted RBP14.75□□□□□ -0.05
PTPRF-213ENST00000481019 MOGSQ13724 837 aa14.75□□□□□ -0.05
PTPRF-213ENST00000481019 ERO1BQ86YB8 467 aa14.75□□□□□ -0.05
PTPRF-213ENST00000481019 SCYL3Q8IZE3 742 aa14.75□□□□□ -0.05
PTPRF-213ENST00000481019 CRNKL1Q9BZJ0 848 aaKnown RBP14.75□□□□□ -0.05
PTPRF-213ENST00000481019 DHX36Q9H2U1 1008 aaKnown RBP14.75□□□□□ -0.05
PTPRF-213ENST00000481019 DCP1AQ9NPI6 582 aaPredicted RBP14.75□□□□□ -0.05
PTPRF-213ENST00000481019 PI4KBQ9UBF8 816 aa14.75□□□□□ -0.05
PTPRF-213ENST00000481019 ATAD5Q96QE3 1844 aa14.75□□□□□ -0.05
PTPRF-213ENST00000481019 MANSC4A6NHS7 340 aaPredicted RBP14.74□□□□□ -0.05
PTPRF-213ENST00000481019 TBC1D8O95759 1140 aa14.74□□□□□ -0.05
PTPRF-213ENST00000481019 PTPRAP18433 802 aa14.74□□□□□ -0.05
PTPRF-213ENST00000481019 PPIL2Q13356 520 aa14.74□□□□□ -0.05
PTPRF-213ENST00000481019 ZSCAN25Q6NSZ9 544 aa14.74□□□□□ -0.05
PTPRF-213ENST00000481019 SKAP1Q86WV1 359 aa14.74□□□□□ -0.05
PTPRF-213ENST00000481019 IFNL1Q8IU54 200 aa14.74□□□□□ -0.05
PTPRF-213ENST00000481019 STRBPQ96SI9 672 aaKnown RBP14.74□□□□□ -0.05
PTPRF-213ENST00000481019 FSD1Q9BTV5 496 aa14.74□□□□□ -0.05
PTPRF-213ENST00000481019 CTNND1O60716 968 aaKnown RBP14.73□□□□□ -0.05
PTPRF-213ENST00000481019 GDF11O95390 407 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 CAP2P40123 477 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 PPATQ06203 517 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 ZMYM1Q5SVZ6 1142 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 CCDC129Q6ZRS4 1044 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 CERS3Q8IU89 383 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 APPBP2Q92624 585 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 BEGAINQ9BUH8 593 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 OSBPL3Q9H4L5 887 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 MCM9Q9NXL9 1143 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 HERC5Q9UII4 1024 aaKnown RBP14.73□□□□□ -0.05
PTPRF-213ENST00000481019 SLC4A4Q9Y6R1 1079 aa14.73□□□□□ -0.05
PTPRF-213ENST00000481019 CCL15-CCL14A0A0B4J2E2 113 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 GSG1L2A8MUP6 293 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 GPAA1O43292 621 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 SHMT1P34896 483 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 GABPAQ06546 454 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 SREBF2Q12772 1141 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 DGKZQ13574 1117 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 CCL15Q16663 113 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 FOXP4Q8IVH2 680 aaPredicted RBP14.72□□□□□ -0.05
PTPRF-213ENST00000481019 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
PTPRF-213ENST00000481019 FAM43AQ8N2R8 423 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 SLC44A5Q8NCS7 719 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 DYNLL2Q96FJ2 89 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 EPB41L4AQ9HCS5 686 aaPredicted RBP14.72□□□□□ -0.05
PTPRF-213ENST00000481019 SAGE1Q9NXZ1 904 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 KCNH4Q9UQ05 1017 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 AFG3L2Q9Y4W6 797 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 ZHX2Q9Y6X8 837 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 CASP8AP2Q9UKL3 1982 aa14.72□□□□□ -0.05
PTPRF-213ENST00000481019 PTPRFP10586 1907 aa14.71□□□□□ -0.05
PTPRF-213ENST00000481019 FOXP2O15409 715 aa14.71□□□□□ -0.05
PTPRF-213ENST00000481019 GTF2A2P52657 109 aa14.71□□□□□ -0.05
PTPRF-213ENST00000481019 CRACR2BQ8N4Y2 399 aaPredicted RBP14.71□□□□□ -0.05
PTPRF-213ENST00000481019 EVI5LQ96CN4 794 aa14.71□□□□□ -0.05
PTPRF-213ENST00000481019 FAM227BQ96M60 508 aa14.71□□□□□ -0.05
PTPRF-213ENST00000481019 EHD4Q9H223 541 aa14.71□□□□□ -0.05
PTPRF-213ENST00000481019 PICK1Q9NRD5 415 aa14.71□□□□□ -0.05
PTPRF-213ENST00000481019 A0A0D9SFI3 127 aa14.7□□□□□ -0.06
PTPRF-213ENST00000481019 BTBD19C9JJ37 291 aa14.7□□□□□ -0.06
PTPRF-213ENST00000481019 USP17L12C9JPN9 530 aa14.7□□□□□ -0.06
PTPRF-213ENST00000481019 USP17L21D6R901 530 aa14.7□□□□□ -0.06
PTPRF-213ENST00000481019 CA12O43570 354 aa14.7□□□□□ -0.06
PTPRF-213ENST00000481019 POLR3DP05423 398 aaPredicted RBP14.7□□□□□ -0.06
PTPRF-213ENST00000481019 HLA-DOAP06340 250 aa14.7□□□□□ -0.06
PTPRF-213ENST00000481019 ZFYP08048 801 aaPredicted RBP14.7□□□□□ -0.06
PTPRF-213ENST00000481019 GSPT1P15170 499 aaKnown RBP14.7□□□□□ -0.06
PTPRF-213ENST00000481019 SNAPC2Q13487 334 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms