RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TMOD2Q9NZR1 351 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 LOC285556D6RIA3 1793 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 PLXNB2O15031 1838 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 FOCADQ5VW36 1801 aa11.01□□□□□ -0.65
VCP-206ENST00000480327 PHF20L1A8MW92 1017 aa11.01□□□□□ -0.65
VCP-206ENST00000480327 MAP4K4O95819 1239 aaPredicted RBP11.01□□□□□ -0.65
VCP-206ENST00000480327 MX1P20591 662 aa11.01□□□□□ -0.65
VCP-206ENST00000480327 NOL9Q5SY16 702 aaKnown RBP11.01□□□□□ -0.65
VCP-206ENST00000480327 DCAF15Q66K64 600 aa11.01□□□□□ -0.65
VCP-206ENST00000480327 EDC3Q96F86 508 aaKnown RBP11.01□□□□□ -0.65
VCP-206ENST00000480327 GPATCH3Q96I76 525 aa11.01□□□□□ -0.65
VCP-206ENST00000480327 ZNF512BQ96KM6 892 aaPredicted RBP11.01□□□□□ -0.65
VCP-206ENST00000480327 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
VCP-206ENST00000480327 SALL1Q9NSC2 1324 aa11.01□□□□□ -0.65
VCP-206ENST00000480327 H0YGN5 161 aa11□□□□□ -0.65
VCP-206ENST00000480327 PDHXO00330 501 aa11□□□□□ -0.65
VCP-206ENST00000480327 GOLIM4O00461 696 aa11□□□□□ -0.65
VCP-206ENST00000480327 CYP2E1P05181 493 aaPredicted RBP11□□□□□ -0.65
VCP-206ENST00000480327 LDHBP07195 334 aaKnown RBP11□□□□□ -0.65
VCP-206ENST00000480327 BCRP11274 1271 aa11□□□□□ -0.65
VCP-206ENST00000480327 ATP5JP18859 108 aa11□□□□□ -0.65
VCP-206ENST00000480327 OSBPP22059 807 aa11□□□□□ -0.65
VCP-206ENST00000480327 PDE4AP27815 886 aa11□□□□□ -0.65
VCP-206ENST00000480327 PSMC4P43686 418 aa11□□□□□ -0.65
VCP-206ENST00000480327 SLC4A8Q2Y0W8 1093 aa11□□□□□ -0.65
VCP-206ENST00000480327 ERICH6BQ5W0A0 696 aa11□□□□□ -0.65
VCP-206ENST00000480327 CENPQQ7L2Z9 268 aaPredicted RBP11□□□□□ -0.65
VCP-206ENST00000480327 UBE2Q1Q7Z7E8 422 aa11□□□□□ -0.65
VCP-206ENST00000480327 NBPF11Q86T75 865 aa11□□□□□ -0.65
VCP-206ENST00000480327 SKAP1Q86WV1 359 aa11□□□□□ -0.65
VCP-206ENST00000480327 ZNF384Q8TF68 577 aa11□□□□□ -0.65
VCP-206ENST00000480327 HOOK2Q96ED9 719 aa11□□□□□ -0.65
VCP-206ENST00000480327 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
VCP-206ENST00000480327 PIH1D3Q9NQM4 214 aaKnown RBP11□□□□□ -0.65
VCP-206ENST00000480327 RAI14Q9P0K7 980 aa11□□□□□ -0.65
VCP-206ENST00000480327 LRP2BPQ9P2M1 347 aa11□□□□□ -0.65
VCP-206ENST00000480327 SRRDQ9UH36 339 aa11□□□□□ -0.65
VCP-206ENST00000480327 ZBTB22O15209 634 aa10.99□□□□□ -0.65
VCP-206ENST00000480327 GNRH1P01148 92 aa10.99□□□□□ -0.65
VCP-206ENST00000480327 CYP2C8P10632 490 aa10.99□□□□□ -0.65
VCP-206ENST00000480327 ARHGEF6Q15052 776 aa10.99□□□□□ -0.65
VCP-206ENST00000480327 ERICH6Q7L0X2 663 aa10.99□□□□□ -0.65
VCP-206ENST00000480327 DDX4Q9NQI0 724 aaKnown RBP10.99□□□□□ -0.65
VCP-206ENST00000480327 USP40Q9NVE5 1235 aa10.99□□□□□ -0.65
VCP-206ENST00000480327 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.99□□□□□ -0.65
VCP-206ENST00000480327 GAKO14976 1311 aa10.99□□□□□ -0.65
VCP-206ENST00000480327 PDS5AQ29RF7 1337 aaKnown RBP10.99□□□□□ -0.65
VCP-206ENST00000480327 SALL3Q9BXA9 1300 aa10.99□□□□□ -0.65
VCP-206ENST00000480327 LAMA3Q16787 3333 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 DDTLA6NHG4 134 aaPredicted RBP10.98□□□□□ -0.65
VCP-206ENST00000480327 IDH1O75874 414 aaKnown RBP10.98□□□□□ -0.65
VCP-206ENST00000480327 RGS3P49796 1198 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 PDE1AP54750 535 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 PRMT2P55345 433 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 MAP3K10Q02779 954 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 KIF22Q14807 665 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 SPTY2D1Q68D10 685 aaPredicted RBP10.98□□□□□ -0.65
VCP-206ENST00000480327 DZIP1Q86YF9 867 aaKnown RBP10.98□□□□□ -0.65
VCP-206ENST00000480327 PLEKHM2Q8IWE5 1019 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 ZGPATQ8N5A5 531 aaKnown RBP10.98□□□□□ -0.65
VCP-206ENST00000480327 PI4K2BQ8TCG2 481 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.98□□□□□ -0.65
VCP-206ENST00000480327 HAUS7Q99871 368 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 IDI2Q9BXS1 227 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 PAG1Q9NWQ8 432 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 GABRQQ9UN88 632 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 TTC41PQ6P2S7 1318 aa10.98□□□□□ -0.65
VCP-206ENST00000480327 A0A0G2JLL6 359 aaPredicted RBP10.97□□□□□ -0.65
VCP-206ENST00000480327 CXCL11O14625 94 aa10.97□□□□□ -0.65
VCP-206ENST00000480327 ERC2O15083 957 aa10.97□□□□□ -0.65
VCP-206ENST00000480327 WDHD1O75717 1129 aaPredicted RBP10.97□□□□□ -0.65
VCP-206ENST00000480327 GLRX3O76003 335 aaKnown RBP10.97□□□□□ -0.65
VCP-206ENST00000480327 MECOMQ03112 1051 aa10.97□□□□□ -0.65
VCP-206ENST00000480327 PRKCZQ05513 592 aa10.97□□□□□ -0.65
VCP-206ENST00000480327 PRRT2Q7Z6L0 340 aaPredicted RBP10.97□□□□□ -0.65
VCP-206ENST00000480327 CCDC84Q86UT8 332 aaPredicted RBP10.97□□□□□ -0.65
VCP-206ENST00000480327 STAP2Q9UGK3 403 aa10.97□□□□□ -0.65
VCP-206ENST00000480327 AFG3L2Q9Y4W6 797 aa10.97□□□□□ -0.65
VCP-206ENST00000480327 MYPNQ86TC9 1320 aa10.97□□□□□ -0.65
VCP-206ENST00000480327 MAST2Q6P0Q8 1798 aa10.97□□□□□ -0.65
VCP-206ENST00000480327 COL6A3P12111 3177 aa10.97□□□□□ -0.65
VCP-206ENST00000480327 ENTPD3O75355 529 aa10.96□□□□□ -0.65
VCP-206ENST00000480327 CCL5P13501 91 aa10.96□□□□□ -0.65
VCP-206ENST00000480327 PTPRAP18433 802 aa10.96□□□□□ -0.65
VCP-206ENST00000480327 GRK4P32298 578 aa10.96□□□□□ -0.65
VCP-206ENST00000480327 RHBDL3P58872 404 aa10.96□□□□□ -0.65
VCP-206ENST00000480327 TTF1Q15361 905 aaPredicted RBP10.96□□□□□ -0.65
VCP-206ENST00000480327 SCYL3Q8IZE3 742 aa10.96□□□□□ -0.65
VCP-206ENST00000480327 NSUN4Q96CB9 384 aaKnown RBP10.96□□□□□ -0.65
VCP-206ENST00000480327 PRO3102Q9H379 93 aa10.96□□□□□ -0.65
VCP-206ENST00000480327 ZHX2Q9Y6X8 837 aa10.96□□□□□ -0.65
VCP-206ENST00000480327 TRIM6-TRIM34B2RNG4 842 aa10.95□□□□□ -0.66
VCP-206ENST00000480327 FMNL1O95466 1100 aaPredicted RBP10.95□□□□□ -0.66
VCP-206ENST00000480327 CHGBP05060 677 aa10.95□□□□□ -0.66
VCP-206ENST00000480327 GJB1P08034 283 aa10.95□□□□□ -0.66
VCP-206ENST00000480327 GJA8P48165 433 aa10.95□□□□□ -0.66
VCP-206ENST00000480327 MAP3K12Q12852 859 aa10.95□□□□□ -0.66
VCP-206ENST00000480327 RRP1BQ14684 758 aaKnown RBP10.95□□□□□ -0.66
VCP-206ENST00000480327 SLFNL1Q499Z3 407 aa10.95□□□□□ -0.66
VCP-206ENST00000480327 NAA16Q6N069 864 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms