RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 ZSCAN16Q9H4T2 348 aaPredicted RBP17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 ATP8A2Q9NTI2 1148 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 PRDM1O75626 825 aa17■□□□□ 0.31
PKNOX1-206ENST00000480179 XRCC6P12956 609 aaKnown RBP eCLIP17■□□□□ 0.31
PKNOX1-206ENST00000480179 CHRNA5P30532 468 aa17■□□□□ 0.31
PKNOX1-206ENST00000480179 ADD1P35611 737 aaKnown RBP17■□□□□ 0.31
PKNOX1-206ENST00000480179 MRE11P49959 708 aa17■□□□□ 0.31
PKNOX1-206ENST00000480179 SLC4A8Q2Y0W8 1093 aa17■□□□□ 0.31
PKNOX1-206ENST00000480179 SYNE3Q6ZMZ3 975 aa17■□□□□ 0.31
PKNOX1-206ENST00000480179 C2CD5Q86YS7 1000 aa17■□□□□ 0.31
PKNOX1-206ENST00000480179 ZNF622Q969S3 477 aaKnown RBP eCLIP17■□□□□ 0.31
PKNOX1-206ENST00000480179 MASTLQ96GX5 879 aa17■□□□□ 0.31
PKNOX1-206ENST00000480179 NOL10Q9BSC4 688 aaKnown RBP17■□□□□ 0.31
PKNOX1-206ENST00000480179 MROH7-TTC4A0A0A0MT08 1334 aa17■□□□□ 0.31
PKNOX1-206ENST00000480179 SYCE3A1L190 88 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 RANBP6O60518 1105 aaKnown RBP16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 CDKL5O76039 1030 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 USP5P45974 858 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 APLP1P51693 650 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 OTUD7BQ6GQQ9 843 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 CPLX2Q6PUV4 134 aaKnown RBP16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 MPNDQ8N594 471 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 FBXW7Q969H0 707 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 C8orf76Q96K31 380 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 SPATA32Q96LK8 384 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 ARPP21Q9UBL0 812 aaPredicted RBP16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 LDHCP07864 332 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 ALDH1B1P30837 517 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 MFSD14BQ5SR56 506 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 MCM9Q9NXL9 1143 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 TAOK2Q9UL54 1235 aa16.99■□□□□ 0.31
PKNOX1-206ENST00000480179 TNKSO95271 1327 aa16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 DLEC1Q9Y238 1755 aa16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 CDK5RAP2Q96SN8 1893 aa16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 IGSF3O75054 1194 aa16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 BAG3O95817 575 aa16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 USP17L8P0C7I0 530 aa16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 LEO1Q8WVC0 666 aaPredicted RBP16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 PHKBQ93100 1093 aa16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 SCAND2PQ9GZW5 306 aaPredicted RBP16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 NMRK2Q9NPI5 230 aa16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 RNF181Q9P0P0 153 aa16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 ELP1O95163 1332 aa16.98■□□□□ 0.31
PKNOX1-206ENST00000480179 SLC3A2P08195 630 aaKnown RBP16.97■□□□□ 0.31
PKNOX1-206ENST00000480179 ZNF654Q8IZM8 581 aa16.97■□□□□ 0.31
PKNOX1-206ENST00000480179 MTA3Q9BTC8 594 aa16.97■□□□□ 0.31
PKNOX1-206ENST00000480179 RTFDC1Q9BY42 306 aaPredicted RBP16.97■□□□□ 0.31
PKNOX1-206ENST00000480179 PANK2Q9BZ23 570 aa16.97■□□□□ 0.31
PKNOX1-206ENST00000480179 TMX4Q9H1E5 349 aaPredicted RBP16.97■□□□□ 0.31
PKNOX1-206ENST00000480179 GJB4Q9NTQ9 266 aa16.97■□□□□ 0.31
PKNOX1-206ENST00000480179 FAM217BQ9NTX9 383 aaPredicted RBP16.97■□□□□ 0.31
PKNOX1-206ENST00000480179 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.97■□□□□ 0.313e-8■■■■■ 40.8
PKNOX1-206ENST00000480179 NID2Q14112 1375 aa16.97■□□□□ 0.31
PKNOX1-206ENST00000480179 PCP11498 1178 aaKnown RBP16.96■□□□□ 0.31
PKNOX1-206ENST00000480179 BTDP43251 543 aa16.96■□□□□ 0.31
PKNOX1-206ENST00000480179 GTF2IP78347 998 aa16.96■□□□□ 0.31
PKNOX1-206ENST00000480179 SEC23AQ15436 765 aa16.96■□□□□ 0.31
PKNOX1-206ENST00000480179 RTN1Q16799 776 aa16.96■□□□□ 0.31
PKNOX1-206ENST00000480179 SBK1Q52WX2 424 aa16.96■□□□□ 0.31
PKNOX1-206ENST00000480179 TBC1D22AQ8WUA7 517 aa16.96■□□□□ 0.31
PKNOX1-206ENST00000480179 AIFM3Q96NN9 605 aa16.96■□□□□ 0.31
PKNOX1-206ENST00000480179 ZSCAN10Q96SZ4 725 aaPredicted RBP16.96■□□□□ 0.31
PKNOX1-206ENST00000480179 ALG1Q9BT22 464 aa16.96■□□□□ 0.31
PKNOX1-206ENST00000480179 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 ORC4O43929 436 aa16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 FGRP09769 529 aa16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 CEBPZQ03701 1054 aaKnown RBP16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 DOK7Q18PE1 504 aa16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 CCDC183Q5T5S1 534 aa16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 ENAHQ8N8S7 591 aaPredicted RBP16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 TGFBRAP1Q8WUH2 860 aa16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 NUP133Q8WUM0 1156 aa16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 SLC26A6Q9BXS9 759 aa16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 COA1Q9GZY4 146 aa16.96■□□□□ 0.3
PKNOX1-206ENST00000480179 H0YIN7 160 aa16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 PPP4CP60510 307 aa16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 NTRK3Q16288 839 aa16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 LRSAM1Q6UWE0 723 aa16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 MAPKAPK5Q8IW41 473 aa16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 TMTC2Q8N394 836 aa16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 FBXO18Q8NFZ0 1043 aa16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 FTOQ9C0B1 505 aaKnown RBP eCLIP16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 ZC3H12CQ9C0D7 883 aaKnown RBP16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 ZNF219Q9P2Y4 722 aaPredicted RBP16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
PKNOX1-206ENST00000480179 BRCA1P38398 1863 aaKnown RBP16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 SLX4Q8IY92 1834 aa16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 GOLGA6L4A6NEF3 574 aa16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 PDE4BQ07343 736 aa16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 SSRP1Q08945 709 aaKnown RBP16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 FAM47AQ5JRC9 791 aa16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 STYK1Q6J9G0 422 aa16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 IQCA1Q86XH1 822 aa16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 RBM46Q8TBY0 533 aaKnown RBP16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 ZNF396Q96N95 335 aaPredicted RBP16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 CFAP45Q9UL16 551 aa16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 ARFGEF1Q9Y6D6 1849 aa16.94■□□□□ 0.3
PKNOX1-206ENST00000480179 G3V3G9 751 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms