RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CCDC129Q6ZRS4 1044 aa23.64■■□□□ 1.37
LIME1-205ENST00000480139 WRNIP1Q96S55 665 aa23.64■■□□□ 1.37
LIME1-205ENST00000480139 NACAP1Q9BZK3 213 aa23.64■■□□□ 1.37
LIME1-205ENST00000480139 ARPP21Q9UBL0 812 aaPredicted RBP23.64■■□□□ 1.37
LIME1-205ENST00000480139 PHF20L1A8MW92 1017 aa23.63■■□□□ 1.37
LIME1-205ENST00000480139 POLR3DP05423 398 aaPredicted RBP23.63■■□□□ 1.37
LIME1-205ENST00000480139 CHMLP26374 656 aa23.63■■□□□ 1.37
LIME1-205ENST00000480139 DOCK1Q14185 1865 aa23.63■■□□□ 1.37
LIME1-205ENST00000480139 SBK1Q52WX2 424 aa23.63■■□□□ 1.37
LIME1-205ENST00000480139 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.63■■□□□ 1.37
LIME1-205ENST00000480139 AMOTL1Q8IY63 956 aa23.63■■□□□ 1.37
LIME1-205ENST00000480139 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.63■■□□□ 1.372e-6■■■■■ 27.8
LIME1-205ENST00000480139 EPB41L4AQ9HCS5 686 aaPredicted RBP23.63■■□□□ 1.37
LIME1-205ENST00000480139 SERPINB13Q9UIV8 391 aa23.63■■□□□ 1.37
LIME1-205ENST00000480139 ECE1P42892 770 aa23.62■■□□□ 1.37
LIME1-205ENST00000480139 PLCD1P51178 756 aa23.62■■□□□ 1.37
LIME1-205ENST00000480139 NOL9Q5SY16 702 aaKnown RBP23.62■■□□□ 1.37
LIME1-205ENST00000480139 ZNF589Q86UQ0 364 aaPredicted RBP23.62■■□□□ 1.37
LIME1-205ENST00000480139 IFNL3Q8IZI9 196 aa23.62■■□□□ 1.37
LIME1-205ENST00000480139 RUFY2Q8WXA3 655 aa23.62■■□□□ 1.37
LIME1-205ENST00000480139 CCDC102AQ96A19 550 aa23.62■■□□□ 1.37
LIME1-205ENST00000480139 USP17L12C9JPN9 530 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 USP17L21D6R901 530 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 FOXP2O15409 715 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 ZNF157P51786 506 aaPredicted RBP23.61■■□□□ 1.37
LIME1-205ENST00000480139 VGLL4Q14135 290 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 C12orf60Q5U649 245 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 CTR9Q6PD62 1173 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 CRACR2BQ8N4Y2 399 aaPredicted RBP23.61■■□□□ 1.37
LIME1-205ENST00000480139 DNAJC5GQ8N7S2 189 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 TRIM34Q9BYJ4 488 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 DNAJC18Q9H819 358 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 CSADQ9Y600 493 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 ATAD5Q96QE3 1844 aa23.61■■□□□ 1.37
LIME1-205ENST00000480139 ZMYM6O95789 1325 aa23.6■■□□□ 1.37
LIME1-205ENST00000480139 CTNND1O60716 968 aaKnown RBP23.6■■□□□ 1.37
LIME1-205ENST00000480139 APPP05067 770 aa23.6■■□□□ 1.37
LIME1-205ENST00000480139 SLC10A3P09131 477 aa23.6■■□□□ 1.37
LIME1-205ENST00000480139 TDO2P48775 406 aa23.6■■□□□ 1.37
LIME1-205ENST00000480139 GABPAQ06546 454 aa23.6■■□□□ 1.37
LIME1-205ENST00000480139 ALX1Q15699 326 aa23.6■■□□□ 1.37
LIME1-205ENST00000480139 RASAL3Q86YV0 1011 aa23.6■■□□□ 1.37
LIME1-205ENST00000480139 CLMNQ96JQ2 1002 aa23.6■■□□□ 1.37
LIME1-205ENST00000480139 ROBO3Q96MS0 1386 aa23.6■■□□□ 1.37
LIME1-205ENST00000480139 MYH8P13535 1937 aa23.59■■□□□ 1.37
LIME1-205ENST00000480139 SLURP2P0DP57 97 aa23.59■■□□□ 1.37
LIME1-205ENST00000480139 INPP5BP32019 993 aa23.59■■□□□ 1.37
LIME1-205ENST00000480139 SLC4A8Q2Y0W8 1093 aa23.59■■□□□ 1.37
LIME1-205ENST00000480139 VPS53Q5VIR6 699 aa23.59■■□□□ 1.37
LIME1-205ENST00000480139 CYP4F22Q6NT55 531 aa23.59■■□□□ 1.37
LIME1-205ENST00000480139 ZKSCAN4Q969J2 545 aaPredicted RBP23.59■■□□□ 1.37
LIME1-205ENST00000480139 SLC10A4Q96EP9 437 aa23.59■■□□□ 1.37
LIME1-205ENST00000480139 CAPNS2Q96L46 248 aa23.59■■□□□ 1.37
LIME1-205ENST00000480139 SNCAIPQ9Y6H5 919 aa23.59■■□□□ 1.37
LIME1-205ENST00000480139 FAM196BA6NMK8 535 aa23.58■■□□□ 1.37
LIME1-205ENST00000480139 FAM155AB1AL88 458 aaPredicted RBP23.58■■□□□ 1.37
LIME1-205ENST00000480139 CYP2D6P10635 497 aa23.58■■□□□ 1.37
LIME1-205ENST00000480139 HSPD1P10809 573 aaKnown RBP23.58■■□□□ 1.37
LIME1-205ENST00000480139 VEGFBP49765 207 aa23.58■■□□□ 1.37
LIME1-205ENST00000480139 TATDN1Q6P1N9 297 aa23.58■■□□□ 1.37
LIME1-205ENST00000480139 PAXIP1Q6ZW49 1069 aaPredicted RBP23.58■■□□□ 1.37
LIME1-205ENST00000480139 NAPBQ9H115 298 aa23.58■■□□□ 1.37
LIME1-205ENST00000480139 SWAP70Q9UH65 585 aa23.58■■□□□ 1.37
LIME1-205ENST00000480139 WDR33Q9C0J8 1336 aaKnown RBP23.58■■□□□ 1.36
LIME1-205ENST00000480139 ZBTB48P10074 688 aaPredicted RBP23.57■■□□□ 1.36
LIME1-205ENST00000480139 SCYL3Q8IZE3 742 aa23.57■■□□□ 1.36
LIME1-205ENST00000480139 GINM1Q9NU53 330 aa23.57■■□□□ 1.36
LIME1-205ENST00000480139 SPDYE5A6NIY4 337 aa23.56■■□□□ 1.36
LIME1-205ENST00000480139 SGSM2O43147 1006 aa23.56■■□□□ 1.36
LIME1-205ENST00000480139 CAP2P40123 477 aa23.56■■□□□ 1.36
LIME1-205ENST00000480139 NOGQ13253 232 aa23.56■■□□□ 1.36
LIME1-205ENST00000480139 C16orf86Q6ZW13 317 aa23.56■■□□□ 1.36
LIME1-205ENST00000480139 ERO1BQ86YB8 467 aa23.56■■□□□ 1.36
LIME1-205ENST00000480139 DSCC1Q9BVC3 393 aa23.56■■□□□ 1.36
LIME1-205ENST00000480139 IL25Q9H293 177 aa23.56■■□□□ 1.36
LIME1-205ENST00000480139 ELP3Q9H9T3 547 aa23.56■■□□□ 1.36
LIME1-205ENST00000480139 LAMA4Q16363 1823 aa23.56■■□□□ 1.36
LIME1-205ENST00000480139 CYP2D7A0A087X1C5 515 aa23.55■■□□□ 1.36
LIME1-205ENST00000480139 SHMT1P34896 483 aa23.55■■□□□ 1.36
LIME1-205ENST00000480139 EVX2Q03828 476 aa23.55■■□□□ 1.36
LIME1-205ENST00000480139 SPRYD7Q5W111 196 aa23.55■■□□□ 1.36
LIME1-205ENST00000480139 WNK4Q96J92 1243 aa23.55■■□□□ 1.36
LIME1-205ENST00000480139 PHIPQ8WWQ0 1821 aa23.54■■□□□ 1.36
LIME1-205ENST00000480139 CDC45O75419 566 aa23.54■■□□□ 1.36
LIME1-205ENST00000480139 MAP2K2P36507 400 aa23.54■■□□□ 1.36
LIME1-205ENST00000480139 RRP1BQ14684 758 aaKnown RBP23.54■■□□□ 1.36
LIME1-205ENST00000480139 PICK1Q9NRD5 415 aa23.54■■□□□ 1.36
LIME1-205ENST00000480139 MINDY4BA8MYZ0 360 aa23.53■■□□□ 1.36
LIME1-205ENST00000480139 FGAP02671 866 aa23.53■■□□□ 1.36
LIME1-205ENST00000480139 PPATQ06203 517 aa23.53■■□□□ 1.36
LIME1-205ENST00000480139 CASC1Q6TDU7 716 aa23.53■■□□□ 1.36
LIME1-205ENST00000480139 OPTNQ96CV9 577 aa23.53■■□□□ 1.36
LIME1-205ENST00000480139 ANAPC4Q9UJX5 808 aa23.53■■□□□ 1.36
LIME1-205ENST00000480139 CEP350Q5VT06 3117 aa23.53■■□□□ 1.36
LIME1-205ENST00000480139 ASNSP08243 561 aa23.52■■□□□ 1.36
LIME1-205ENST00000480139 PPARAQ07869 468 aa23.52■■□□□ 1.36
LIME1-205ENST00000480139 PPIL2Q13356 520 aa23.52■■□□□ 1.36
LIME1-205ENST00000480139 DYNLL2Q96FJ2 89 aa23.52■■□□□ 1.36
LIME1-205ENST00000480139 ESYT1Q9BSJ8 1104 aa23.52■■□□□ 1.36
LIME1-205ENST00000480139 TBC1D2Q9BYX2 928 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms