RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 TRIM32Q13049 653 aa13.84□□□□□ -0.19
ACTB-209ENST00000473257 MTX1Q13505 466 aa13.84□□□□□ -0.19
ACTB-209ENST00000473257 SLF2Q8IX21 1173 aa13.84□□□□□ -0.19
ACTB-209ENST00000473257 TEX11Q8IYF3 940 aa13.84□□□□□ -0.19
ACTB-209ENST00000473257 SLAIN1Q8ND83 568 aa13.84□□□□□ -0.19
ACTB-209ENST00000473257 DEFB118Q96PH6 123 aa13.84□□□□□ -0.19
ACTB-209ENST00000473257 OSBPL5Q9H0X9 879 aaPredicted RBP13.84□□□□□ -0.19
ACTB-209ENST00000473257 C1orf115Q9H7X2 142 aa13.84□□□□□ -0.19
ACTB-209ENST00000473257 AGTPBP1Q9UPW5 1226 aa13.84□□□□□ -0.19
ACTB-209ENST00000473257 CT47B1P0C2W7 299 aaPredicted RBP13.83□□□□□ -0.2
ACTB-209ENST00000473257 UBXN2AP68543 259 aa13.83□□□□□ -0.2
ACTB-209ENST00000473257 ADGRA1Q86SQ6 560 aa13.83□□□□□ -0.2
ACTB-209ENST00000473257 DIS3LQ8TF46 1054 aaKnown RBP13.83□□□□□ -0.2
ACTB-209ENST00000473257 A0A0C4DFX4 3053 aa13.83□□□□□ -0.2
ACTB-209ENST00000473257 TFRCP02786 760 aaKnown RBP13.82□□□□□ -0.2
ACTB-209ENST00000473257 GNAI2P04899 355 aa13.82□□□□□ -0.2
ACTB-209ENST00000473257 ARID4AP29374 1257 aaPredicted RBP13.82□□□□□ -0.2
ACTB-209ENST00000473257 MAPKAPK5Q8IW41 473 aa13.82□□□□□ -0.2
ACTB-209ENST00000473257 TMEM57Q8N5G2 664 aa13.82□□□□□ -0.2
ACTB-209ENST00000473257 DBNDD2Q9BQY9 259 aa13.82□□□□□ -0.2
ACTB-209ENST00000473257 AATFQ9NY61 560 aaKnown RBP eCLIP13.82□□□□□ -0.23e-17■□□□□ 10.5
ACTB-209ENST00000473257 LRP2BPQ9P2M1 347 aa13.82□□□□□ -0.2
ACTB-209ENST00000473257 SAP30BPQ9UHR5 308 aaKnown RBP13.82□□□□□ -0.2
ACTB-209ENST00000473257 HDAC5Q9UQL6 1122 aa13.82□□□□□ -0.2
ACTB-209ENST00000473257 TBC1D12O60347 775 aa13.81□□□□□ -0.2
ACTB-209ENST00000473257 SGPL1O95470 568 aa13.81□□□□□ -0.2
ACTB-209ENST00000473257 CAP2P40123 477 aa13.81□□□□□ -0.2
ACTB-209ENST00000473257 G3BP1Q13283 466 aaKnown RBP eCLIP13.81□□□□□ -0.22e-23■□□□□ 11
ACTB-209ENST00000473257 ATF7IPQ6VMQ6 1270 aa13.81□□□□□ -0.2
ACTB-209ENST00000473257 ZNF280CQ8ND82 737 aa13.81□□□□□ -0.2
ACTB-209ENST00000473257 NKX2-3Q8TAU0 364 aa13.81□□□□□ -0.2
ACTB-209ENST00000473257 ARHGAP45Q92619 1136 aa13.81□□□□□ -0.2
ACTB-209ENST00000473257 ASCC2Q9H1I8 757 aaPredicted RBP13.81□□□□□ -0.2
ACTB-209ENST00000473257 DNAJC18Q9H819 358 aa13.81□□□□□ -0.2
ACTB-209ENST00000473257 TLR7Q9NYK1 1049 aaKnown RBP13.81□□□□□ -0.2
ACTB-209ENST00000473257 SLC45A1Q9Y2W3 748 aa13.81□□□□□ -0.2
ACTB-209ENST00000473257 NDUFB9Q9Y6M9 179 aa13.81□□□□□ -0.2
ACTB-209ENST00000473257 SIPA1L1O43166 1804 aa13.8□□□□□ -0.2
ACTB-209ENST00000473257 ATAD5Q96QE3 1844 aa13.8□□□□□ -0.2
ACTB-209ENST00000473257 COL6A3P12111 3177 aa13.8□□□□□ -0.2
ACTB-209ENST00000473257 ZBTB7BO15156 539 aaPredicted RBP13.8□□□□□ -0.2
ACTB-209ENST00000473257 ZBTB22O15209 634 aa13.8□□□□□ -0.2
ACTB-209ENST00000473257 GDF11O95390 407 aa13.8□□□□□ -0.2
ACTB-209ENST00000473257 LDHCP07864 332 aa13.8□□□□□ -0.2
ACTB-209ENST00000473257 DYNLL1P63167 89 aaKnown RBP13.8□□□□□ -0.2
ACTB-209ENST00000473257 GSTO1P78417 241 aa13.8□□□□□ -0.2
ACTB-209ENST00000473257 MTMR2Q13614 643 aa13.8□□□□□ -0.2
ACTB-209ENST00000473257 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
ACTB-209ENST00000473257 PIH1D3Q9NQM4 214 aaKnown RBP13.8□□□□□ -0.2
ACTB-209ENST00000473257 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
ACTB-209ENST00000473257 LOC285556D6RIA3 1793 aa13.79□□□□□ -0.2
ACTB-209ENST00000473257 CYP2E1P05181 493 aaPredicted RBP13.79□□□□□ -0.2
ACTB-209ENST00000473257 ZAP70P43403 619 aa13.79□□□□□ -0.2
ACTB-209ENST00000473257 IRF5Q13568 498 aa13.79□□□□□ -0.2
ACTB-209ENST00000473257 TTC39AQ5SRH9 613 aa13.79□□□□□ -0.2
ACTB-209ENST00000473257 NAA16Q6N069 864 aaPredicted RBP13.79□□□□□ -0.2
ACTB-209ENST00000473257 COA7Q96BR5 231 aa13.79□□□□□ -0.2
ACTB-209ENST00000473257 PAWRQ96IZ0 340 aaKnown RBP13.79□□□□□ -0.2
ACTB-209ENST00000473257 HTATIP2Q9BUP3 242 aa13.79□□□□□ -0.2
ACTB-209ENST00000473257 PALD1Q9ULE6 856 aa13.79□□□□□ -0.2
ACTB-209ENST00000473257 USP17L5A8MUK1 530 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 SOX1O00570 391 aaPredicted RBP13.78□□□□□ -0.2
ACTB-209ENST00000473257 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
ACTB-209ENST00000473257 OS9Q13438 667 aaPredicted RBP13.78□□□□□ -0.2
ACTB-209ENST00000473257 FAM110CQ1W6H9 321 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 TNNI3KQ59H18 835 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 PROCA1Q8NCQ7 364 aaPredicted RBP13.78□□□□□ -0.2
ACTB-209ENST00000473257 PXYLP1Q8TE99 480 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 P2RX7Q99572 595 aaKnown RBP13.78□□□□□ -0.2
ACTB-209ENST00000473257 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.78□□□□□ -0.23e-14■■■□□ 15.1
ACTB-209ENST00000473257 CCDC8Q9H0W5 538 aaPredicted RBP13.78□□□□□ -0.2
ACTB-209ENST00000473257 PRO3102Q9H379 93 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 TXNRD2Q9NNW7 524 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 PAK6Q9NQU5 681 aaPredicted RBP13.78□□□□□ -0.2
ACTB-209ENST00000473257 STAP2Q9UGK3 403 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 GJD2Q9UKL4 321 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 FPGT-TNNI3KV9GXZ4 949 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 DNAH12Q6ZR08 3092 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 ALPK3Q96L96 1907 aa13.78□□□□□ -0.2
ACTB-209ENST00000473257 IPO8O15397 1037 aaKnown RBP13.77□□□□□ -0.21
ACTB-209ENST00000473257 EVI5O60447 810 aa13.77□□□□□ -0.21
ACTB-209ENST00000473257 UQCRFS1P1P0C7P4 283 aa13.77□□□□□ -0.21
ACTB-209ENST00000473257 RLBP1P12271 317 aa13.77□□□□□ -0.21
ACTB-209ENST00000473257 FLT1P17948 1338 aa13.77□□□□□ -0.21
ACTB-209ENST00000473257 POLA2Q14181 598 aa13.77□□□□□ -0.21
ACTB-209ENST00000473257 POTEEQ6S8J3 1075 aa13.77□□□□□ -0.21
ACTB-209ENST00000473257 MIGA1Q8NAN2 632 aa13.77□□□□□ -0.21
ACTB-209ENST00000473257 CRISPLD2Q9H0B8 497 aa13.77□□□□□ -0.21
ACTB-209ENST00000473257 PNMA3Q9UL41 463 aa13.77□□□□□ -0.21
ACTB-209ENST00000473257 ZMYND8Q9ULU4 1186 aaPredicted RBP13.77□□□□□ -0.21
ACTB-209ENST00000473257 PLXNB2O15031 1838 aa13.76□□□□□ -0.21
ACTB-209ENST00000473257 COL2A1P02458 1487 aaPredicted RBP13.76□□□□□ -0.21
ACTB-209ENST00000473257 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
ACTB-209ENST00000473257 CYP2B6P20813 491 aa13.76□□□□□ -0.21
ACTB-209ENST00000473257 TRIB2Q92519 343 aa13.76□□□□□ -0.21
ACTB-209ENST00000473257 NOL10Q9BSC4 688 aaKnown RBP13.76□□□□□ -0.21
ACTB-209ENST00000473257 PI4KBQ9UBF8 816 aa13.76□□□□□ -0.21
ACTB-209ENST00000473257 DBNLQ9UJU6 430 aaKnown RBP13.76□□□□□ -0.21
ACTB-209ENST00000473257 NR2E3Q9Y5X4 410 aa13.76□□□□□ -0.21
ACTB-209ENST00000473257 LAMA2P24043 3122 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms