RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 BNIP3Q12983 259 aa8.81□□□□□ -1
CD46-213ENST00000471987 WFDC3Q8IUB2 231 aa8.81□□□□□ -1
CD46-213ENST00000471987 U3KQE9 123 aa8.81□□□□□ -1
CD46-213ENST00000471987 ITGB5P18084 799 aa8.8□□□□□ -1
CD46-213ENST00000471987 LCE1DQ5T752 114 aa8.8□□□□□ -1
CD46-213ENST00000471987 ASIC4Q96FT7 647 aa8.8□□□□□ -1
CD46-213ENST00000471987 HRASLS5Q96KN8 279 aa8.8□□□□□ -1
CD46-213ENST00000471987 IGF2BP3O00425 579 aaKnown RBP eCLIP8.79□□□□□ -1
CD46-213ENST00000471987 SND1Q7KZF4 910 aaKnown RBP eCLIP8.79□□□□□ -19e-16■■□□□ 14.3
CD46-213ENST00000471987 HDXQ7Z353 690 aa8.79□□□□□ -1
CD46-213ENST00000471987 ZNF507Q8TCN5 953 aa8.79□□□□□ -1
CD46-213ENST00000471987 CD8BP10966 210 aa8.78□□□□□ -1
CD46-213ENST00000471987 FUT4P22083 530 aa8.78□□□□□ -1
CD46-213ENST00000471987 AOC3Q16853 763 aa8.78□□□□□ -1
CD46-213ENST00000471987 ZNF792Q3KQV3 632 aa8.78□□□□□ -1
CD46-213ENST00000471987 EAPPQ56P03 285 aaPredicted RBP8.78□□□□□ -1
CD46-213ENST00000471987 TTBK2Q6IQ55 1244 aa8.78□□□□□ -1
CD46-213ENST00000471987 UBE3DQ7Z6J8 389 aa8.78□□□□□ -1
CD46-213ENST00000471987 HEXIM2Q96MH2 286 aaKnown RBP8.78□□□□□ -1
CD46-213ENST00000471987 PLAGL2Q9UPG8 496 aa8.78□□□□□ -1
CD46-213ENST00000471987 SNX11Q9Y5W9 270 aa8.78□□□□□ -1
CD46-213ENST00000471987 AK5Q9Y6K8 562 aa8.78□□□□□ -1
CD46-213ENST00000471987 ANKRD33BA6NCL7 494 aa8.77□□□□□ -1.01
CD46-213ENST00000471987 ITIH2P19823 946 aa8.77□□□□□ -1.01
CD46-213ENST00000471987 INPP5AQ14642 412 aa8.77□□□□□ -1.01
CD46-213ENST00000471987 CCDC85BQ15834 202 aaPredicted RBP8.77□□□□□ -1.01
CD46-213ENST00000471987 LRFN4Q6PJG9 635 aa8.77□□□□□ -1.01
CD46-213ENST00000471987 ARMCX6Q7L4S7 300 aa8.77□□□□□ -1.01
CD46-213ENST00000471987 FAM214BQ7L5A3 538 aa8.77□□□□□ -1.01
CD46-213ENST00000471987 TNKS2Q9H2K2 1166 aa8.77□□□□□ -1.01
CD46-213ENST00000471987 PRAMEF27A3QJZ7 478 aa8.76□□□□□ -1.01
CD46-213ENST00000471987 BIN1O00499 593 aa8.76□□□□□ -1.01
CD46-213ENST00000471987 LRIG2O94898 1065 aa8.76□□□□□ -1.01
CD46-213ENST00000471987 LMNB1P20700 586 aa8.76□□□□□ -1.01
CD46-213ENST00000471987 RPS26P62854 115 aaKnown RBP8.76□□□□□ -1.01
CD46-213ENST00000471987 PTPN11Q06124 597 aaPredicted RBP8.76□□□□□ -1.01
CD46-213ENST00000471987 CYFIP1Q7L576 1253 aa8.76□□□□□ -1.01
CD46-213ENST00000471987 GAL3ST3Q96A11 431 aa8.76□□□□□ -1.01
CD46-213ENST00000471987 PLPPR2Q96GM1 343 aa8.76□□□□□ -1.01
CD46-213ENST00000471987 DUSP9Q99956 384 aaKnown RBP8.76□□□□□ -1.01
CD46-213ENST00000471987 SNCAIPQ9Y6H5 919 aa8.76□□□□□ -1.01
CD46-213ENST00000471987 ANGEL2Q5VTE6 544 aaKnown RBP8.75□□□□□ -1.01
CD46-213ENST00000471987 AEBP1Q8IUX7 1158 aa8.75□□□□□ -1.01
CD46-213ENST00000471987 WNT10AQ9GZT5 417 aa8.75□□□□□ -1.01
CD46-213ENST00000471987 GNAT3A8MTJ3 354 aa8.74□□□□□ -1.01
CD46-213ENST00000471987 PDIA4P13667 645 aaKnown RBP8.74□□□□□ -1.01
CD46-213ENST00000471987 CD96P40200 585 aa8.74□□□□□ -1.01
CD46-213ENST00000471987 WIPI1Q5MNZ9 446 aaPredicted RBP8.74□□□□□ -1.01
CD46-213ENST00000471987 PI4K2BQ8TCG2 481 aa8.74□□□□□ -1.01
CD46-213ENST00000471987 PRDM5Q9NQX1 630 aaPredicted RBP8.74□□□□□ -1.01
CD46-213ENST00000471987 PAPLNO95428 1278 aa8.73□□□□□ -1.01
CD46-213ENST00000471987 EOMESO95936 686 aa8.73□□□□□ -1.01
CD46-213ENST00000471987 YBX3P16989 372 aaKnown RBP eCLIP8.73□□□□□ -1.01
CD46-213ENST00000471987 ETF1P62495 437 aaKnown RBP8.73□□□□□ -1.01
CD46-213ENST00000471987 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.73□□□□□ -1.01
CD46-213ENST00000471987 SPACA3Q8IXA5 215 aa8.73□□□□□ -1.01
CD46-213ENST00000471987 ASB11Q8WXH4 323 aa8.73□□□□□ -1.01
CD46-213ENST00000471987 FOXQ1Q9C009 403 aa8.73□□□□□ -1.01
CD46-213ENST00000471987 RC3H2Q9HBD1 1191 aaKnown RBP8.73□□□□□ -1.01
CD46-213ENST00000471987 MAPK8IP1Q9UQF2 711 aa8.73□□□□□ -1.01
CD46-213ENST00000471987 RNASE1P07998 156 aaKnown RBP8.72□□□□□ -1.01
CD46-213ENST00000471987 CAP2P40123 477 aa8.72□□□□□ -1.01
CD46-213ENST00000471987 SLBPQ14493 270 aaKnown RBP eCLIP8.72□□□□□ -1.01
CD46-213ENST00000471987 ATG4DQ86TL0 474 aaPredicted RBP8.72□□□□□ -1.01
CD46-213ENST00000471987 FBRSQ9HAH7 460 aa8.72□□□□□ -1.01
CD46-213ENST00000471987 MBNL3Q9NUK0 354 aaKnown RBP8.72□□□□□ -1.01
CD46-213ENST00000471987 SLITRK5O94991 958 aa8.71□□□□□ -1.02
CD46-213ENST00000471987 CLCN7P51798 805 aa8.71□□□□□ -1.02
CD46-213ENST00000471987 NKPD1Q17RQ9 610 aa8.71□□□□□ -1.02
CD46-213ENST00000471987 AGMOQ6ZNB7 445 aa8.71□□□□□ -1.02
CD46-213ENST00000471987 HID1Q8IV36 788 aa8.71□□□□□ -1.02
CD46-213ENST00000471987 MFSD2AQ8NA29 543 aa8.71□□□□□ -1.02
CD46-213ENST00000471987 RNF19AQ9NV58 838 aa8.71□□□□□ -1.02
CD46-213ENST00000471987 ADAMTS6Q9UKP5 1117 aa8.71□□□□□ -1.02
CD46-213ENST00000471987 RLBP1P12271 317 aa8.7□□□□□ -1.02
CD46-213ENST00000471987 LIG3P49916 1009 aa8.7□□□□□ -1.02
CD46-213ENST00000471987 OGFOD2Q6N063 350 aa8.7□□□□□ -1.02
CD46-213ENST00000471987 SLC23A3Q6PIS1 610 aa8.7□□□□□ -1.02
CD46-213ENST00000471987 PARP2Q9UGN5 583 aa8.7□□□□□ -1.02
CD46-213ENST00000471987 TPX2Q9ULW0 747 aaKnown RBP8.7□□□□□ -1.02
CD46-213ENST00000471987 PCDHB5Q9Y5E4 795 aa8.7□□□□□ -1.02
CD46-213ENST00000471987 TACC3Q9Y6A5 838 aa8.7□□□□□ -1.02
CD46-213ENST00000471987 CDK8P49336 464 aa8.69□□□□□ -1.02
CD46-213ENST00000471987 PSMD2Q13200 908 aa8.69□□□□□ -1.02
CD46-213ENST00000471987 IKZF1Q13422 519 aa8.69□□□□□ -1.02
CD46-213ENST00000471987 SEPT6Q14141 434 aa8.69□□□□□ -1.02
CD46-213ENST00000471987 MAP3K11Q16584 847 aa8.69□□□□□ -1.02
CD46-213ENST00000471987 NKG7Q16617 165 aa8.69□□□□□ -1.02
CD46-213ENST00000471987 MIPEPQ99797 713 aa8.69□□□□□ -1.02
CD46-213ENST00000471987 MIR1-1HGQ9H1L0 117 aa8.69□□□□□ -1.02
CD46-213ENST00000471987 GRK4P32298 578 aa8.68□□□□□ -1.02
CD46-213ENST00000471987 DAB2P98082 770 aa8.68□□□□□ -1.02
CD46-213ENST00000471987 MEI1Q5TIA1 1274 aa8.68□□□□□ -1.02
CD46-213ENST00000471987 ZNF746Q6NUN9 644 aaPredicted RBP8.68□□□□□ -1.02
CD46-213ENST00000471987 NPAS4Q8IUM7 802 aa8.68□□□□□ -1.02
CD46-213ENST00000471987 LRRN4CLQ8ND94 238 aa8.68□□□□□ -1.02
CD46-213ENST00000471987 FAM155AB1AL88 458 aaPredicted RBP8.67□□□□□ -1.02
CD46-213ENST00000471987 GFRA2O00451 464 aa8.67□□□□□ -1.02
CD46-213ENST00000471987 ST13P50502 369 aaKnown RBP8.67□□□□□ -1.02
CD46-213ENST00000471987 XPCQ01831 940 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms