RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SH3BP5LQ7L8J4 393 aa17.93■□□□□ 0.46
CDC42SE1-203ENST00000470278 MAPKAPK5Q8IW41 473 aa17.93■□□□□ 0.46
CDC42SE1-203ENST00000470278 FAM227BQ96M60 508 aa17.93■□□□□ 0.46
CDC42SE1-203ENST00000470278 RAD50Q92878 1312 aa17.93■□□□□ 0.46
CDC42SE1-203ENST00000470278 CENPFP49454 3210 aa17.93■□□□□ 0.46
CDC42SE1-203ENST00000470278 DDTLA6NHG4 134 aaPredicted RBP17.92■□□□□ 0.46
CDC42SE1-203ENST00000470278 UBE2Q2LH0YL09 131 aa17.92■□□□□ 0.46
CDC42SE1-203ENST00000470278 MAP3K11Q16584 847 aa17.92■□□□□ 0.46
CDC42SE1-203ENST00000470278 GIMAP6Q6P9H5 292 aa17.92■□□□□ 0.46
CDC42SE1-203ENST00000470278 SDR42E1Q8WUS8 393 aa17.92■□□□□ 0.46
CDC42SE1-203ENST00000470278 SEC62Q99442 399 aaKnown RBP17.92■□□□□ 0.46
CDC42SE1-203ENST00000470278 DCP1AQ9NPI6 582 aaPredicted RBP17.92■□□□□ 0.46
CDC42SE1-203ENST00000470278 BAZ2AQ9UIF9 1905 aaKnown RBP17.92■□□□□ 0.46
CDC42SE1-203ENST00000470278 MAP3K10Q02779 954 aa17.91■□□□□ 0.46
CDC42SE1-203ENST00000470278 ZSCAN29Q8IWY8 852 aaPredicted RBP17.91■□□□□ 0.46
CDC42SE1-203ENST00000470278 TAOK2Q9UL54 1235 aa17.91■□□□□ 0.46
CDC42SE1-203ENST00000470278 SLC4A4Q9Y6R1 1079 aa17.91■□□□□ 0.46
CDC42SE1-203ENST00000470278 MKI67P46013 3256 aaKnown RBP17.91■□□□□ 0.46
CDC42SE1-203ENST00000470278 CCDC171Q6TFL3 1326 aa17.91■□□□□ 0.46
CDC42SE1-203ENST00000470278 UNCXA6NJT0 531 aa17.9■□□□□ 0.46
CDC42SE1-203ENST00000470278 PRKAB2O43741 272 aa17.9■□□□□ 0.46
CDC42SE1-203ENST00000470278 PPP1R12BO60237 982 aaPredicted RBP17.9■□□□□ 0.46
CDC42SE1-203ENST00000470278 TBC1D12O60347 775 aa17.9■□□□□ 0.46
CDC42SE1-203ENST00000470278 CHMLP26374 656 aa17.9■□□□□ 0.46
CDC42SE1-203ENST00000470278 MFAP1P55081 439 aaKnown RBP17.9■□□□□ 0.46
CDC42SE1-203ENST00000470278 DCAF15Q66K64 600 aa17.9■□□□□ 0.46
CDC42SE1-203ENST00000470278 METTL16Q86W50 562 aaKnown RBP17.9■□□□□ 0.46
CDC42SE1-203ENST00000470278 DDRGK1Q96HY6 314 aa17.9■□□□□ 0.46
CDC42SE1-203ENST00000470278 PI4KBQ9UBF8 816 aa17.9■□□□□ 0.46
CDC42SE1-203ENST00000470278 GSG1L2A8MUP6 293 aa17.89■□□□□ 0.45
CDC42SE1-203ENST00000470278 CWC27Q6UX04 472 aaKnown RBP17.89■□□□□ 0.45
CDC42SE1-203ENST00000470278 ARMC9Q7Z3E5 817 aa17.89■□□□□ 0.45
CDC42SE1-203ENST00000470278 ZNF589Q86UQ0 364 aaPredicted RBP17.89■□□□□ 0.45
CDC42SE1-203ENST00000470278 EHD4Q9H223 541 aa17.89■□□□□ 0.45
CDC42SE1-203ENST00000470278 ARPP21Q9UBL0 812 aaPredicted RBP17.89■□□□□ 0.45
CDC42SE1-203ENST00000470278 HERC5Q9UII4 1024 aaKnown RBP17.89■□□□□ 0.45
CDC42SE1-203ENST00000470278 FZD1Q9UP38 647 aa17.89■□□□□ 0.45
CDC42SE1-203ENST00000470278 ZMYM6O95789 1325 aa17.89■□□□□ 0.45
CDC42SE1-203ENST00000470278 FOXP2O15409 715 aa17.88■□□□□ 0.45
CDC42SE1-203ENST00000470278 HLA-DOAP06340 250 aa17.88■□□□□ 0.45
CDC42SE1-203ENST00000470278 CCDC129Q6ZRS4 1044 aa17.88■□□□□ 0.45
CDC42SE1-203ENST00000470278 TTC6Q86TZ1 520 aa17.88■□□□□ 0.45
CDC42SE1-203ENST00000470278 RUFY2Q8WXA3 655 aa17.88■□□□□ 0.45
CDC42SE1-203ENST00000470278 R3HDMLQ9H3Y0 253 aa17.88■□□□□ 0.45
CDC42SE1-203ENST00000470278 EPB41L4AQ9HCS5 686 aaPredicted RBP17.88■□□□□ 0.45
CDC42SE1-203ENST00000470278 MCM9Q9NXL9 1143 aa17.88■□□□□ 0.45
CDC42SE1-203ENST00000470278 PALD1Q9ULE6 856 aa17.88■□□□□ 0.45
CDC42SE1-203ENST00000470278 GTF3C3Q9Y5Q9 886 aa17.88■□□□□ 0.45
CDC42SE1-203ENST00000470278 LAMA4Q16363 1823 aa17.87■□□□□ 0.45
CDC42SE1-203ENST00000470278 PATL2C9JE40 543 aaKnown RBP17.87■□□□□ 0.45
CDC42SE1-203ENST00000470278 IREB2P48200 963 aaKnown RBP17.87■□□□□ 0.45
CDC42SE1-203ENST00000470278 SOX10P56693 466 aa17.87■□□□□ 0.45
CDC42SE1-203ENST00000470278 LDLRAD1Q5T700 205 aa17.87■□□□□ 0.45
CDC42SE1-203ENST00000470278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.87■□□□□ 0.45
CDC42SE1-203ENST00000470278 ZNF341Q9BYN7 854 aa17.87■□□□□ 0.45
CDC42SE1-203ENST00000470278 NACAP1Q9BZK3 213 aa17.87■□□□□ 0.45
CDC42SE1-203ENST00000470278 SAP30BPQ9UHR5 308 aaKnown RBP17.87■□□□□ 0.45
CDC42SE1-203ENST00000470278 ROBO3Q96MS0 1386 aa17.87■□□□□ 0.45
CDC42SE1-203ENST00000470278 BRCA2P51587 3418 aa17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 USP2O75604 605 aaPredicted RBP17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 SBK1Q52WX2 424 aa17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 CTU1Q7Z7A3 348 aaKnown RBP17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 FOXP4Q8IVH2 680 aaPredicted RBP17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 AMOTL1Q8IY63 956 aa17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 IFNL3Q8IZI9 196 aa17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 SERPINB13Q9UIV8 391 aa17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 ZNF112Q9UJU3 913 aa17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 ANGEL1Q9UNK9 670 aaKnown RBP17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 DOCK1Q14185 1865 aa17.86■□□□□ 0.45
CDC42SE1-203ENST00000470278 SGSM2O43147 1006 aa17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 CDC45O75419 566 aa17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 HSPD1P10809 573 aaKnown RBP17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 GABPAQ06546 454 aa17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 TTLL12Q14166 644 aaPredicted RBP17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 C12orf60Q5U649 245 aa17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 VPS53Q5VIR6 699 aa17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 CTR9Q6PD62 1173 aa17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 ANKRD13AQ8IZ07 590 aa17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 ZNF296Q8WUU4 475 aaPredicted RBP17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 IL25Q9H293 177 aa17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 DNAJC18Q9H819 358 aa17.85■□□□□ 0.45
CDC42SE1-203ENST00000470278 RBBP6Q7Z6E9 1792 aaKnown RBP17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 PHF20L1A8MW92 1017 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 USP17L12C9JPN9 530 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 USP17L21D6R901 530 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 TBC1D8O95759 1140 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 POLR3DP05423 398 aaPredicted RBP17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 TM4SF4P48230 202 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 TDO2P48775 406 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 PLCD1P51178 756 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 ALX1Q15699 326 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 MIGA2Q7L4E1 593 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 WRNIP1Q96S55 665 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 DSCC1Q9BVC3 393 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 NAPBQ9H115 298 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 MYH8P13535 1937 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 ATAD5Q96QE3 1844 aa17.84■□□□□ 0.45
CDC42SE1-203ENST00000470278 APPP05067 770 aa17.83■□□□□ 0.44
CDC42SE1-203ENST00000470278 MKRN3Q13064 507 aaKnown RBP17.83■□□□□ 0.44
CDC42SE1-203ENST00000470278 PRKG1Q13976 671 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms