RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ELMO3Q96BJ8 720 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 SEMA6BQ9H3T3 888 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 PICK1Q9NRD5 415 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 ZMYM5Q9UJ78 669 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 CD2APQ9Y5K6 639 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 SLC12A7Q9Y666 1083 aa5.11□□□□□ -1.59
HMGB1P25-201ENST00000468402 SOX1O00570 391 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 SIN3BO75182 1162 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 RGS9O75916 674 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 ATE1O95260 518 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 PARNO95453 639 aaKnown RBP5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 CYP11A1P05108 521 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 ADH7P40394 386 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 CDK8P49336 464 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 ZNF252P-AS1Q0IIN9 211 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 PDE3AQ14432 1141 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 NCAPHQ15003 741 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 PLEKHG6Q3KR16 790 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 HSP90AB2PQ58FF8 381 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 CCDC181Q5TID7 509 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 ZNF468Q5VIY5 522 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 ADAMTSL4Q6UY14 1074 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 FERMT3Q86UX7 667 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 ZSWIM2Q8NEG5 633 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 ST13P5Q8NFI4 369 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 GPBAR1Q8TDU6 330 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 NUDT8Q8WV74 236 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 TMEM40Q8WWA1 233 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 IPO9Q96P70 1041 aaKnown RBP5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 ADAM19Q9H013 955 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 KLHL3Q9UH77 587 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 PCDHB10Q9UN67 800 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 CORINQ9Y5Q5 1042 aa5.1□□□□□ -1.59
HMGB1P25-201ENST00000468402 PRAMEF27A3QJZ7 478 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 KRBA1A5PL33 1030 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 IQCA1LA6NCM1 817 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 AGRPO00253 132 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 MYCLP1P12525 358 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 SNRPNP63162 240 aaKnown RBP5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 PDE4BQ07343 736 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 INPP5AQ14642 412 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 POU4F3Q15319 338 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 GNPTABQ3T906 1256 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 AXDND1Q5T1B0 1012 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 HGSNATQ68CP4 663 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 SCARA3Q6AZY7 606 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 PSAPL1Q6NUJ1 521 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 KIAA1211LQ6NV74 962 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 TXNDC11Q6PKC3 985 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 UNC5AQ6ZN44 842 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 ALYREFQ86V81 257 aaKnown RBP5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 DHX37Q8IY37 1157 aaKnown RBP5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 RPUSD2Q8IZ73 545 aaKnown RBP5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 SYNPOQ8N3V7 929 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 IL22RA1Q8N6P7 574 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 PLPPR2Q96GM1 343 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 SPATA9Q9BWV2 254 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 IRF2BPLQ9H1B7 796 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 CHPF2Q9P2E5 772 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 REV1Q9UBZ9 1251 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 PPME1Q9Y570 386 aa5.09□□□□□ -1.59
HMGB1P25-201ENST00000468402 DCDC2CA8MYV0 355 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 H3BRJ5 948 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 OIP5O43482 229 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 FAM153BP0C7A2 387 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 EPHA1P21709 976 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 ALAS2P22557 587 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 C19orf57Q0VDD7 668 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 NLRC3Q7RTR2 1065 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 PDZD3Q86UT5 571 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 LRRC47Q8N1G4 583 aaKnown RBP5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 JDP2Q8WYK2 163 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 PPP1R14AQ96A00 147 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 CCDC136Q96JN2 1154 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 SLC26A8Q96RN1 970 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 CDC6Q99741 560 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 PHAXQ9H814 394 aaKnown RBP5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 HOMER2Q9NSB8 354 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 FAM86C1Q9NVL1 165 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 NOP53Q9NZM5 478 aaKnown RBP5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 GMIPQ9P107 970 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 LRP2BPQ9P2M1 347 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 PLAAQ9Y263 795 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 CSADQ9Y600 493 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 SNCAIPQ9Y6H5 919 aa5.08□□□□□ -1.6
HMGB1P25-201ENST00000468402 SLC22A31A6NKX4 558 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 LINC01387J3KSC0 135 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 IRS4O14654 1257 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 EIF4EBP3O60516 100 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 PGRP06401 933 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 PDGFRBP09619 1106 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 NME1P15531 152 aaKnown RBP5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 RAG1P15918 1043 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 LIG1P18858 919 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 MAOBP27338 520 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 ADH6P28332 368 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 EVA1CP58658 441 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 ETF1P62495 437 aaKnown RBP5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 SLC7A5Q01650 507 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 DOC2BQ14184 412 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms