RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 GBA2Q9HCG7 927 aaPredicted RBP19.09■□□□□ 0.65
GPC1-207ENST00000466624 SERPINB13Q9UIV8 391 aa19.09■□□□□ 0.65
GPC1-207ENST00000466624 FGAP02671 866 aa19.08■□□□□ 0.64
GPC1-207ENST00000466624 PLCD1P51178 756 aa19.08■□□□□ 0.64
GPC1-207ENST00000466624 GABPAQ06546 454 aa19.08■□□□□ 0.64
GPC1-207ENST00000466624 KIAA1211Q6ZU35 1233 aa19.08■□□□□ 0.64
GPC1-207ENST00000466624 C2orf69Q8N8R5 385 aa19.08■□□□□ 0.64
GPC1-207ENST00000466624 ATAD5Q96QE3 1844 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 TMEM88BA6NKF7 163 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 USP2O75604 605 aaPredicted RBP19.07■□□□□ 0.64
GPC1-207ENST00000466624 IREB2P48200 963 aaKnown RBP19.07■□□□□ 0.64
GPC1-207ENST00000466624 APLP1P51693 650 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 ARMC9Q7Z3E5 817 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 MAP4K1Q92918 833 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 KLRG1Q96E93 195 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 LSG1Q9H089 658 aaKnown RBP19.07■□□□□ 0.64
GPC1-207ENST00000466624 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.07■□□□□ 0.64
GPC1-207ENST00000466624 SWAP70Q9UH65 585 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 CTNNA3Q9UI47 895 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 ZNF112Q9UJU3 913 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 ANAPC4Q9UJX5 808 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 DOCK1Q14185 1865 aa19.07■□□□□ 0.64
GPC1-207ENST00000466624 EPB41L2O43491 1005 aaKnown RBP19.06■□□□□ 0.64
GPC1-207ENST00000466624 EIF5BO60841 1220 aaKnown RBP19.06■□□□□ 0.64
GPC1-207ENST00000466624 CYP2D6P10635 497 aa19.06■□□□□ 0.64
GPC1-207ENST00000466624 MIGA2Q7L4E1 593 aa19.06■□□□□ 0.64
GPC1-207ENST00000466624 CRACR2BQ8N4Y2 399 aaPredicted RBP19.06■□□□□ 0.64
GPC1-207ENST00000466624 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.06■□□□□ 0.64
GPC1-207ENST00000466624 TRIM34Q9BYJ4 488 aa19.06■□□□□ 0.64
GPC1-207ENST00000466624 DNAJC18Q9H819 358 aa19.06■□□□□ 0.64
GPC1-207ENST00000466624 U3KPZ7 1027 aaPredicted RBP19.06■□□□□ 0.64
GPC1-207ENST00000466624 C1QTNF8P60827 252 aa19.05■□□□□ 0.64
GPC1-207ENST00000466624 PTH1RQ03431 593 aa19.05■□□□□ 0.64
GPC1-207ENST00000466624 PPARAQ07869 468 aa19.05■□□□□ 0.64
GPC1-207ENST00000466624 SLC4A8Q2Y0W8 1093 aa19.05■□□□□ 0.64
GPC1-207ENST00000466624 TATDN1Q6P1N9 297 aa19.05■□□□□ 0.64
GPC1-207ENST00000466624 C16orf86Q6ZW13 317 aa19.05■□□□□ 0.64
GPC1-207ENST00000466624 ANO2Q9NQ90 1003 aa19.05■□□□□ 0.64
GPC1-207ENST00000466624 ANGEL1Q9UNK9 670 aaKnown RBP19.05■□□□□ 0.64
GPC1-207ENST00000466624 CYP2D7A0A087X1C5 515 aa19.04■□□□□ 0.64
GPC1-207ENST00000466624 PHF20L1A8MW92 1017 aa19.04■□□□□ 0.64
GPC1-207ENST00000466624 MINDY4BA8MYZ0 360 aa19.04■□□□□ 0.64
GPC1-207ENST00000466624 REC8O95072 547 aa19.04■□□□□ 0.64
GPC1-207ENST00000466624 SLC3A2P08195 630 aaKnown RBP19.04■□□□□ 0.64
GPC1-207ENST00000466624 TTLL12Q14166 644 aaPredicted RBP19.04■□□□□ 0.64
GPC1-207ENST00000466624 LDLRAD1Q5T700 205 aa19.04■□□□□ 0.64
GPC1-207ENST00000466624 CREBZFQ9NS37 354 aa19.04■□□□□ 0.64
GPC1-207ENST00000466624 TLL2Q9Y6L7 1015 aa19.04■□□□□ 0.64
GPC1-207ENST00000466624 MAP3K9P80192 1104 aa19.03■□□□□ 0.64
GPC1-207ENST00000466624 EVX2Q03828 476 aa19.03■□□□□ 0.64
GPC1-207ENST00000466624 PRKG1Q13976 671 aa19.03■□□□□ 0.64
GPC1-207ENST00000466624 IMMTQ16891 758 aaKnown RBP19.03■□□□□ 0.64
GPC1-207ENST00000466624 SAPCD2Q86UD0 394 aa19.03■□□□□ 0.64
GPC1-207ENST00000466624 ANKRD13AQ8IZ07 590 aa19.03■□□□□ 0.64
GPC1-207ENST00000466624 HHIPL1Q96JK4 782 aa19.03■□□□□ 0.64
GPC1-207ENST00000466624 WRNIP1Q96S55 665 aa19.03■□□□□ 0.64
GPC1-207ENST00000466624 ZNF287Q9HBT7 754 aa19.03■□□□□ 0.64
GPC1-207ENST00000466624 GINM1Q9NU53 330 aa19.03■□□□□ 0.64
GPC1-207ENST00000466624 GREB1LQ9C091 1923 aaPredicted RBP19.02■□□□□ 0.64
GPC1-207ENST00000466624 FAM196BA6NMK8 535 aa19.02■□□□□ 0.64
GPC1-207ENST00000466624 ZNF213O14771 459 aa19.02■□□□□ 0.64
GPC1-207ENST00000466624 CTNND1O60716 968 aaKnown RBP19.02■□□□□ 0.64
GPC1-207ENST00000466624 PCP11498 1178 aaKnown RBP19.02■□□□□ 0.64
GPC1-207ENST00000466624 SHMT1P34896 483 aa19.02■□□□□ 0.64
GPC1-207ENST00000466624 CDK8P49336 464 aa19.02■□□□□ 0.64
GPC1-207ENST00000466624 NOL9Q5SY16 702 aaKnown RBP19.02■□□□□ 0.64
GPC1-207ENST00000466624 MOB2Q70IA6 237 aa19.02■□□□□ 0.64
GPC1-207ENST00000466624 FZD1Q9UP38 647 aa19.02■□□□□ 0.64
GPC1-207ENST00000466624 RBM8AQ9Y5S9 174 aaKnown RBP19.02■□□□□ 0.64
GPC1-207ENST00000466624 SMIM22K7EJ46 135 aa19.01■□□□□ 0.63
GPC1-207ENST00000466624 FGRP09769 529 aa19.01■□□□□ 0.63
GPC1-207ENST00000466624 SLURP2P0DP57 97 aa19.01■□□□□ 0.63
GPC1-207ENST00000466624 NT5C2P49902 561 aa19.01■□□□□ 0.63
GPC1-207ENST00000466624 HUNKP57058 714 aa19.01■□□□□ 0.63
GPC1-207ENST00000466624 PDE4BQ07343 736 aa19.01■□□□□ 0.63
GPC1-207ENST00000466624 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.01■□□□□ 0.63
GPC1-207ENST00000466624 DYNLL2Q96FJ2 89 aa19.01■□□□□ 0.63
GPC1-207ENST00000466624 PHIPQ8WWQ0 1821 aa19■□□□□ 0.63
GPC1-207ENST00000466624 UBE2Q2LH0YL09 131 aa19■□□□□ 0.63
GPC1-207ENST00000466624 CAP2P40123 477 aa19■□□□□ 0.63
GPC1-207ENST00000466624 C8orf34Q49A92 452 aa19■□□□□ 0.63
GPC1-207ENST00000466624 SCYL3Q8IZE3 742 aa19■□□□□ 0.63
GPC1-207ENST00000466624 STAG1Q8WVM7 1258 aa19■□□□□ 0.63
GPC1-207ENST00000466624 CCDC17Q96LX7 622 aa19■□□□□ 0.63
GPC1-207ENST00000466624 RNF41Q9H4P4 317 aaPredicted RBP19■□□□□ 0.63
GPC1-207ENST00000466624 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19■□□□□ 0.63
GPC1-207ENST00000466624 CSADQ9Y600 493 aa19■□□□□ 0.63
GPC1-207ENST00000466624 ORC4O43929 436 aa18.99■□□□□ 0.63
GPC1-207ENST00000466624 HSPA6P17066 643 aa18.99■□□□□ 0.63
GPC1-207ENST00000466624 INPP5BP32019 993 aa18.99■□□□□ 0.63
GPC1-207ENST00000466624 CTDSPL2Q05D32 466 aa18.99■□□□□ 0.63
GPC1-207ENST00000466624 VGLL4Q14135 290 aa18.99■□□□□ 0.63
GPC1-207ENST00000466624 NECTIN1Q15223 517 aa18.99■□□□□ 0.63
GPC1-207ENST00000466624 CERKLQ49MI3 558 aaPredicted RBP18.99■□□□□ 0.63
GPC1-207ENST00000466624 SLC44A5Q8NCS7 719 aa18.99■□□□□ 0.63
GPC1-207ENST00000466624 NBPF3Q9H094 633 aa18.99■□□□□ 0.63
GPC1-207ENST00000466624 ABT1Q9ULW3 272 aaKnown RBP18.99■□□□□ 0.63
GPC1-207ENST00000466624 RASSF10A6NK89 507 aa18.98■□□□□ 0.63
GPC1-207ENST00000466624 CYP21A2P08686 494 aa18.98■□□□□ 0.63
GPC1-207ENST00000466624 HAND2P61296 217 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms