RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 RNF214Q8ND24 703 aa6.62□□□□□ -1.35
CDC42BPA-211ENST00000466538 ZNF507Q8TCN5 953 aa6.62□□□□□ -1.35
CDC42BPA-211ENST00000466538 TRIM55Q9BYV6 548 aa6.62□□□□□ -1.35
CDC42BPA-211ENST00000466538 GMIPQ9P107 970 aa6.62□□□□□ -1.35
CDC42BPA-211ENST00000466538 REV1Q9UBZ9 1251 aa6.62□□□□□ -1.35
CDC42BPA-211ENST00000466538 PPP1R9AQ9ULJ8 1098 aa6.62□□□□□ -1.35
CDC42BPA-211ENST00000466538 SMAD7O15105 426 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 TMPRSS2O15393 492 aa6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 SPATA31C1P0DKV0 1188 aa6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 CANXP27824 592 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 SERINC3Q13530 473 aa6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 ANKRD34AQ69YU3 496 aa6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 TAB3Q8N5C8 712 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 C12orf50Q8NA57 414 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 ZSCAN1Q8NBB4 408 aa6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 TMEM40Q8WWA1 233 aa6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 LENG1Q96BZ8 264 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 GSX1Q9H4S2 264 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 ZSWIM4Q9H7M6 989 aa6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 DISC1Q9NRI5 854 aa6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 CORINQ9Y5Q5 1042 aa6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
CDC42BPA-211ENST00000466538 SLC22A31A6NKX4 558 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 WISP1O95388 367 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 TIAF1O95411 115 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 PGRP06401 933 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 GRK4P32298 578 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 ETF1P62495 437 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 NRG1Q02297 640 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 AKAP4Q5JQC9 854 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 ZBTB37Q5TC79 503 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 CDCP2Q5VXM1 449 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 ALYREFQ86V81 257 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 LSRQ86X29 649 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 HID1Q8IV36 788 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 MCATQ8IVS2 390 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 SCARF2Q96GP6 870 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 FANCD2OSQ96PS1 177 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 NACC1Q96RE7 527 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 PICK1Q9NRD5 415 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 ACTR10Q9NZ32 417 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 CSADQ9Y600 493 aa6.6□□□□□ -1.35
CDC42BPA-211ENST00000466538 PRAMEF27A3QJZ7 478 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 C9orf172C9J069 976 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 F8W735 103 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 ADH5P11766 374 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 FXNQ16595 210 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 PPM1JQ5JR12 505 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 SLC6A19Q695T7 634 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 FDX2Q6P4F2 183 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 CDC37L1Q7L3B6 337 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 FAM169BQ8N8A8 192 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 ATG4CQ96DT6 458 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 CCDC113Q9H0I3 377 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 CNNM2Q9H8M5 875 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 ADAMTS8Q9UP79 889 aa6.59□□□□□ -1.35
CDC42BPA-211ENST00000466538 CADPSQ9ULU8 1353 aa6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 FAM229AH3BQW9 127 aa6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 TNFRSF10CO14798 259 aa6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 NME1P15531 152 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 GUCY2CP25092 1073 aa6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 CAP2P40123 477 aa6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 CCNFP41002 786 aa6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 YARSP54577 528 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 INSM1Q01101 510 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 DYMQ7RTS9 669 aa6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 MRPL41Q8IXM3 137 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 HNRNPLLQ8WVV9 542 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 MRFAP1L1Q96HT8 127 aa6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 CEP41Q9BYV8 373 aa6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 AKTIPQ9H8T0 292 aa6.58□□□□□ -1.36
CDC42BPA-211ENST00000466538 CNTNAP5Q8WYK1 1306 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 A0A1W2PQH9 124 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 TLDC2A0PJX2 215 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 K7ELQ4 463 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 ASPAP45381 313 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 GRIK4Q16099 956 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 PPP2R5EQ16537 467 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 NLRC3Q7RTR2 1065 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 SLFN12Q8IYM2 578 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 ACSF2Q96CM8 615 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 ANTXR1Q9H6X2 564 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 PIDD1Q9HB75 910 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 AP4E1Q9UPM8 1137 aa6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 CDK11AQ9UQ88 783 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-211ENST00000466538 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 CHURC1-FNTBB4DL54 471 aa6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 APBA3O96018 575 aa6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 DRD2P14416 443 aa6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 NTF4P34130 210 aa6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 TTLL4Q14679 1199 aa6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 OVOS1Q6IE37 1185 aa6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 ZNF746Q6NUN9 644 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 GIMAP6Q6P9H5 292 aa6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 Q6ZS46 218 aa6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 TTC6Q86TZ1 520 aa6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 C2CD4AQ8NCU7 369 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-211ENST00000466538 TMEM87BQ96K49 555 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms