RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 C9orf50Q5SZB4 431 aa11.56□□□□□ -0.56
ABCF3-205ENST00000466416 GPRC5AQ8NFJ5 357 aa11.56□□□□□ -0.56
ABCF3-205ENST00000466416 SUCLG2Q96I99 432 aa11.56□□□□□ -0.56
ABCF3-205ENST00000466416 OSBPL5Q9H0X9 879 aaPredicted RBP11.56□□□□□ -0.56
ABCF3-205ENST00000466416 EYSQ5T1H1 3165 aa11.56□□□□□ -0.56
ABCF3-205ENST00000466416 PTPRFP10586 1907 aa11.55□□□□□ -0.56
ABCF3-205ENST00000466416 DDTLA6NHG4 134 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-205ENST00000466416 MSCO60682 206 aa11.55□□□□□ -0.56
ABCF3-205ENST00000466416 SLC5A1P13866 664 aa11.55□□□□□ -0.56
ABCF3-205ENST00000466416 HOXA7P31268 230 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-205ENST00000466416 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-205ENST00000466416 HMGCS2P54868 508 aa11.55□□□□□ -0.56
ABCF3-205ENST00000466416 RTP1P59025 263 aa11.55□□□□□ -0.56
ABCF3-205ENST00000466416 IRX3P78415 501 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-205ENST00000466416 MAP3K12Q12852 859 aa11.55□□□□□ -0.56
ABCF3-205ENST00000466416 CCDC84Q86UT8 332 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-205ENST00000466416 CCAR1Q8IX12 1150 aaKnown RBP11.55□□□□□ -0.56
ABCF3-205ENST00000466416 ATXN2LQ8WWM7 1075 aaKnown RBP11.55□□□□□ -0.56
ABCF3-205ENST00000466416 KAZALD1Q96I82 304 aa11.55□□□□□ -0.56
ABCF3-205ENST00000466416 SRCIN1Q9C0H9 1055 aa11.55□□□□□ -0.56
ABCF3-205ENST00000466416 GNL3LQ9NVN8 582 aaKnown RBP11.55□□□□□ -0.56
ABCF3-205ENST00000466416 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.55□□□□□ -0.56
ABCF3-205ENST00000466416 SALL1Q9NSC2 1324 aa11.55□□□□□ -0.56
ABCF3-205ENST00000466416 MUC3AQ02505 3323 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 USP17L5A8MUK1 530 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 DNM1LO00429 736 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 VAMP4O75379 141 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 CCDC27Q2M243 656 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 RABL6Q3YEC7 729 aaPredicted RBP11.54□□□□□ -0.56
ABCF3-205ENST00000466416 MORN1Q5T089 497 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 MFSD14CQ5VZR4 134 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 SLF2Q8IX21 1173 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 LPIN2Q92539 896 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 LPAR1Q92633 364 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 P2RX7Q99572 595 aaKnown RBP11.54□□□□□ -0.56
ABCF3-205ENST00000466416 APBA2Q99767 749 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.54□□□□□ -0.56
ABCF3-205ENST00000466416 AS3MTQ9HBK9 375 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 ARIH1Q9Y4X5 557 aaPredicted RBP11.54□□□□□ -0.56
ABCF3-205ENST00000466416 IL16Q14005 1332 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 NCOR1O75376 2440 aa11.54□□□□□ -0.56
ABCF3-205ENST00000466416 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
ABCF3-205ENST00000466416 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
ABCF3-205ENST00000466416 CCL14Q16627 93 aa11.53□□□□□ -0.56
ABCF3-205ENST00000466416 PLEKHH3Q7Z736 793 aa11.53□□□□□ -0.56
ABCF3-205ENST00000466416 ZGPATQ8N5A5 531 aaKnown RBP11.53□□□□□ -0.56
ABCF3-205ENST00000466416 GTF3C2Q8WUA4 911 aaPredicted RBP11.53□□□□□ -0.56
ABCF3-205ENST00000466416 BADQ92934 168 aa11.53□□□□□ -0.56
ABCF3-205ENST00000466416 FAM163AQ96GL9 167 aaPredicted RBP11.53□□□□□ -0.56
ABCF3-205ENST00000466416 BICC1Q9H694 974 aaKnown RBP11.53□□□□□ -0.56
ABCF3-205ENST00000466416 DDX20Q9UHI6 824 aaKnown RBP11.53□□□□□ -0.56
ABCF3-205ENST00000466416 DENND2AQ9ULE3 1009 aa11.53□□□□□ -0.56
ABCF3-205ENST00000466416 ATP11BQ9Y2G3 1177 aa11.53□□□□□ -0.56
ABCF3-205ENST00000466416 UTYO14607 1347 aa11.53□□□□□ -0.56
ABCF3-205ENST00000466416 GAKO14976 1311 aa11.53□□□□□ -0.56
ABCF3-205ENST00000466416 PHIPQ8WWQ0 1821 aa11.53□□□□□ -0.56
ABCF3-205ENST00000466416 PLXNB2O15031 1838 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 SEMA3EO15041 775 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 NBPF7P0C2Y1 421 aaPredicted RBP11.52□□□□□ -0.57
ABCF3-205ENST00000466416 CAP2P40123 477 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 HERVK_113P62684 666 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 GRIN2CQ14957 1233 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 SLC39A5Q6ZMH5 540 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 GPR142Q7Z601 462 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 WWC1Q8IX03 1113 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 USP38Q8NB14 1042 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 ARRDC4Q8NCT1 418 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 EDC3Q96F86 508 aaKnown RBP11.52□□□□□ -0.57
ABCF3-205ENST00000466416 ASB2Q96Q27 587 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 TXNRD2Q9NNW7 524 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 DDX4Q9NQI0 724 aaKnown RBP11.52□□□□□ -0.57
ABCF3-205ENST00000466416 TMOD4Q9NZQ9 345 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 RBPJLQ9UBG7 517 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 DOCK1Q14185 1865 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 RFX7Q2KHR2 1363 aa11.52□□□□□ -0.57
ABCF3-205ENST00000466416 ZBTB22O15209 634 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 GLRX3O76003 335 aaKnown RBP11.51□□□□□ -0.57
ABCF3-205ENST00000466416 BACE1P56817 501 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 ERVK-9P63128 1117 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 ERVK-24P63145 666 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 MAP2K5Q13163 448 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 PICALMQ13492 652 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 Q3C1V9 767 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 SLC4A10Q6U841 1118 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 ADAMTS19Q8TE59 1207 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 WDR18Q9BV38 432 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 C1QTNF1Q9BXJ1 281 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 PRDM5Q9NQX1 630 aaPredicted RBP11.51□□□□□ -0.57
ABCF3-205ENST00000466416 SYNGAP1Q96PV0 1343 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 DOCK2Q92608 1830 aa11.51□□□□□ -0.57
ABCF3-205ENST00000466416 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.5□□□□□ -0.57
ABCF3-205ENST00000466416 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.5□□□□□ -0.57
ABCF3-205ENST00000466416 C19orf81C9J6K1 198 aa11.5□□□□□ -0.57
ABCF3-205ENST00000466416 MAP4K4O95819 1239 aaPredicted RBP11.5□□□□□ -0.57
ABCF3-205ENST00000466416 CNGA1P29973 690 aa11.5□□□□□ -0.57
ABCF3-205ENST00000466416 MRPS5P82675 430 aaKnown RBP11.5□□□□□ -0.57
ABCF3-205ENST00000466416 SNX17Q15036 470 aa11.5□□□□□ -0.57
ABCF3-205ENST00000466416 AKNAD1Q5T1N1 836 aa11.5□□□□□ -0.57
ABCF3-205ENST00000466416 ANKRD44Q8N8A2 993 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms