RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
CNOT4-208ENST00000465721 PICALMQ13492 652 aa14.64□□□□□ -0.07
CNOT4-208ENST00000465721 ANKRD13CQ8N6S4 541 aa14.64□□□□□ -0.07
CNOT4-208ENST00000465721 DIS3LQ8TF46 1054 aaKnown RBP14.64□□□□□ -0.07
CNOT4-208ENST00000465721 LRCH3Q96II8 777 aa14.64□□□□□ -0.07
CNOT4-208ENST00000465721 FAM196BA6NMK8 535 aa14.63□□□□□ -0.07
CNOT4-208ENST00000465721 TFRCP02786 760 aaKnown RBP14.63□□□□□ -0.07
CNOT4-208ENST00000465721 RHBDL3P58872 404 aa14.63□□□□□ -0.07
CNOT4-208ENST00000465721 ALDH1L2Q3SY69 923 aa14.63□□□□□ -0.07
CNOT4-208ENST00000465721 PAWRQ96IZ0 340 aaKnown RBP14.63□□□□□ -0.07
CNOT4-208ENST00000465721 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.63□□□□□ -0.07
CNOT4-208ENST00000465721 COPRSQ9NQ92 184 aa14.63□□□□□ -0.07
CNOT4-208ENST00000465721 ABCF2Q9UG63 623 aa14.63□□□□□ -0.07
CNOT4-208ENST00000465721 MYH1P12882 1939 aa14.62□□□□□ -0.07
CNOT4-208ENST00000465721 TBC1D12O60347 775 aa14.62□□□□□ -0.07
CNOT4-208ENST00000465721 PROCA1Q8NCQ7 364 aaPredicted RBP14.62□□□□□ -0.07
CNOT4-208ENST00000465721 COA7Q96BR5 231 aa14.62□□□□□ -0.07
CNOT4-208ENST00000465721 SMC4Q9NTJ3 1288 aa14.62□□□□□ -0.07
CNOT4-208ENST00000465721 STAP2Q9UGK3 403 aa14.62□□□□□ -0.07
CNOT4-208ENST00000465721 PNMA3Q9UL41 463 aa14.62□□□□□ -0.07
CNOT4-208ENST00000465721 TAOK2Q9UL54 1235 aa14.62□□□□□ -0.07
CNOT4-208ENST00000465721 GPR75-ASB3A0A0A6YYF3 556 aa14.61□□□□□ -0.07
CNOT4-208ENST00000465721 HMGCRP04035 888 aa14.61□□□□□ -0.07
CNOT4-208ENST00000465721 MECOMQ03112 1051 aa14.61□□□□□ -0.07
CNOT4-208ENST00000465721 SLFN5Q08AF3 891 aa14.61□□□□□ -0.07
CNOT4-208ENST00000465721 NECAB2Q7Z6G3 386 aa14.61□□□□□ -0.07
CNOT4-208ENST00000465721 SLF2Q8IX21 1173 aa14.61□□□□□ -0.07
CNOT4-208ENST00000465721 GDF15Q99988 308 aa14.61□□□□□ -0.07
CNOT4-208ENST00000465721 MNX1P50219 401 aaPredicted RBP14.6□□□□□ -0.07
CNOT4-208ENST00000465721 RRP1BQ14684 758 aaKnown RBP14.6□□□□□ -0.07
CNOT4-208ENST00000465721 SPTY2D1Q68D10 685 aaPredicted RBP14.6□□□□□ -0.07
CNOT4-208ENST00000465721 ANKLE1Q8NAG6 615 aa14.6□□□□□ -0.07
CNOT4-208ENST00000465721 OSBPL5Q9H0X9 879 aaPredicted RBP14.6□□□□□ -0.07
CNOT4-208ENST00000465721 EYSQ5T1H1 3165 aa14.6□□□□□ -0.07
CNOT4-208ENST00000465721 A0A1B0GUL7 405 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 GCLCP48506 637 aaPredicted RBP14.59□□□□□ -0.07
CNOT4-208ENST00000465721 HMGCS2P54868 508 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 TIMM10P62072 90 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 TRIM32Q13049 653 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 SPP2Q13103 211 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 C7orf61Q8IZ16 206 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 ZNF280CQ8ND82 737 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 SLC17A8Q8NDX2 589 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 XAGE2Q96GT9 111 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 MEIS3Q99687 375 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.59□□□□□ -0.07
CNOT4-208ENST00000465721 GJD2Q9UKL4 321 aa14.59□□□□□ -0.07
CNOT4-208ENST00000465721 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.59□□□□□ -0.07
CNOT4-208ENST00000465721 DLL1O00548 723 aa14.58□□□□□ -0.08
CNOT4-208ENST00000465721 BMP8BP34820 402 aa14.58□□□□□ -0.08
CNOT4-208ENST00000465721 MVPQ14764 893 aaKnown RBP14.58□□□□□ -0.08
CNOT4-208ENST00000465721 PI16Q6UXB8 463 aa14.58□□□□□ -0.08
CNOT4-208ENST00000465721 ERICH6Q7L0X2 663 aa14.58□□□□□ -0.08
CNOT4-208ENST00000465721 NSUN4Q96CB9 384 aaKnown RBP14.58□□□□□ -0.08
CNOT4-208ENST00000465721 TBC1D2Q9BYX2 928 aa14.58□□□□□ -0.08
CNOT4-208ENST00000465721 ASCC2Q9H1I8 757 aaPredicted RBP14.58□□□□□ -0.08
CNOT4-208ENST00000465721 ZMYND8Q9ULU4 1186 aaPredicted RBP14.58□□□□□ -0.08
CNOT4-208ENST00000465721 VCANP13611 3396 aa14.57□□□□□ -0.08
CNOT4-208ENST00000465721 LTBP2Q14767 1821 aa14.57□□□□□ -0.08
CNOT4-208ENST00000465721 MAP4K4O95819 1239 aaPredicted RBP14.57□□□□□ -0.08
CNOT4-208ENST00000465721 CAP2P40123 477 aa14.57□□□□□ -0.08
CNOT4-208ENST00000465721 TFCP2Q12800 502 aa14.57□□□□□ -0.08
CNOT4-208ENST00000465721 SH3D19Q5HYK7 790 aa14.57□□□□□ -0.08
CNOT4-208ENST00000465721 TRIB2Q92519 343 aa14.57□□□□□ -0.08
CNOT4-208ENST00000465721 CDCA7LQ96GN5 454 aa14.57□□□□□ -0.08
CNOT4-208ENST00000465721 HMG20BQ9P0W2 317 aa14.57□□□□□ -0.08
CNOT4-208ENST00000465721 MORF4L1Q9UBU8 362 aa14.57□□□□□ -0.08
CNOT4-208ENST00000465721 NOB1Q9ULX3 412 aaKnown RBP14.57□□□□□ -0.08
CNOT4-208ENST00000465721 RPTORQ8N122 1335 aa14.57□□□□□ -0.08
CNOT4-208ENST00000465721 PRUNE2Q8WUY3 3088 aa14.56□□□□□ -0.08
CNOT4-208ENST00000465721 USP17L5A8MUK1 530 aa14.56□□□□□ -0.08
CNOT4-208ENST00000465721 PABPC4Q13310 644 aaKnown RBP eCLIP14.56□□□□□ -0.08
CNOT4-208ENST00000465721 MTX1Q13505 466 aa14.56□□□□□ -0.08
CNOT4-208ENST00000465721 MAP3K21Q5TCX8 1036 aa14.56□□□□□ -0.08
CNOT4-208ENST00000465721 GPR153Q6NV75 609 aa14.56□□□□□ -0.08
CNOT4-208ENST00000465721 SPATA5Q8NB90 893 aa14.56□□□□□ -0.08
CNOT4-208ENST00000465721 NBPF3Q9H094 633 aa14.56□□□□□ -0.08
CNOT4-208ENST00000465721 HMX1Q9NP08 348 aaPredicted RBP14.56□□□□□ -0.08
CNOT4-208ENST00000465721 OGDHLQ9ULD0 1010 aa14.56□□□□□ -0.08
CNOT4-208ENST00000465721 AKAP2Q9Y2D5 859 aa14.56□□□□□ -0.08
CNOT4-208ENST00000465721 ARID4AP29374 1257 aaPredicted RBP14.55□□□□□ -0.08
CNOT4-208ENST00000465721 TBC1D9Q6ZT07 1266 aa14.55□□□□□ -0.08
CNOT4-208ENST00000465721 TRMT2AQ8IZ69 625 aaKnown RBP14.55□□□□□ -0.08
CNOT4-208ENST00000465721 API5Q9BZZ5 524 aaKnown RBP14.55□□□□□ -0.08
CNOT4-208ENST00000465721 C11orf49Q9H6J7 331 aa14.55□□□□□ -0.08
CNOT4-208ENST00000465721 HDAC5Q9UQL6 1122 aa14.55□□□□□ -0.08
CNOT4-208ENST00000465721 PFASO15067 1338 aa14.55□□□□□ -0.08
CNOT4-208ENST00000465721 CDH23Q9H251 3354 aa14.54□□□□□ -0.08
CNOT4-208ENST00000465721 SPTBN5Q9NRC6 3674 aaKnown RBP14.54□□□□□ -0.08
CNOT4-208ENST00000465721 SRGAP3O43295 1099 aa14.54□□□□□ -0.08
CNOT4-208ENST00000465721 LDHCP07864 332 aa14.54□□□□□ -0.08
CNOT4-208ENST00000465721 MAGEA10P43363 369 aaPredicted RBP14.54□□□□□ -0.08
CNOT4-208ENST00000465721 GSTO1P78417 241 aa14.54□□□□□ -0.08
CNOT4-208ENST00000465721 MTMR2Q13614 643 aa14.54□□□□□ -0.08
CNOT4-208ENST00000465721 LRIT3Q3SXY7 679 aa14.54□□□□□ -0.08
CNOT4-208ENST00000465721 TEX11Q8IYF3 940 aa14.54□□□□□ -0.08
CNOT4-208ENST00000465721 WDR18Q9BV38 432 aa14.54□□□□□ -0.08
CNOT4-208ENST00000465721 DNAJC18Q9H819 358 aa14.54□□□□□ -0.08
CNOT4-208ENST00000465721 HERC5Q9UII4 1024 aaKnown RBP14.54□□□□□ -0.08
CNOT4-208ENST00000465721 RLFQ13129 1914 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms