RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 JAKMIP1Q96N16 626 aaKnown RBP17.79■□□□□ 0.44
ABCF3-204ENST00000463685 PGAP2Q9UHJ9 254 aa17.79■□□□□ 0.44
ABCF3-204ENST00000463685 SIPA1L1O43166 1804 aa17.78■□□□□ 0.44
ABCF3-204ENST00000463685 TNFAIP1Q13829 316 aa17.78■□□□□ 0.44
ABCF3-204ENST00000463685 RRP12Q5JTH9 1297 aaKnown RBP17.78■□□□□ 0.44
ABCF3-204ENST00000463685 AKNAD1Q5T1N1 836 aa17.78■□□□□ 0.44
ABCF3-204ENST00000463685 TTC6Q86TZ1 520 aa17.78■□□□□ 0.44
ABCF3-204ENST00000463685 DCPSQ96C86 337 aaKnown RBP17.78■□□□□ 0.44
ABCF3-204ENST00000463685 TEPSINQ96N21 525 aa17.78■□□□□ 0.44
ABCF3-204ENST00000463685 CSRNP1Q96S65 589 aa17.78■□□□□ 0.44
ABCF3-204ENST00000463685 CLEC11AQ9Y240 323 aa17.78■□□□□ 0.44
ABCF3-204ENST00000463685 ATRNL1Q5VV63 1379 aa17.78■□□□□ 0.44
ABCF3-204ENST00000463685 HLA-DOAP06340 250 aa17.77■□□□□ 0.44
ABCF3-204ENST00000463685 ANAPC15P60006 121 aa17.77■□□□□ 0.44
ABCF3-204ENST00000463685 TSGA10IPQ3SY00 556 aa17.77■□□□□ 0.44
ABCF3-204ENST00000463685 MFSD6Q6ZSS7 791 aa17.77■□□□□ 0.44
ABCF3-204ENST00000463685 USP48Q86UV5 1035 aa17.77■□□□□ 0.44
ABCF3-204ENST00000463685 PNMA8AQ86V59 439 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-204ENST00000463685 STAG1Q8WVM7 1258 aa17.77■□□□□ 0.44
ABCF3-204ENST00000463685 DHX36Q9H2U1 1008 aaKnown RBP17.77■□□□□ 0.44
ABCF3-204ENST00000463685 TOMM22Q9NS69 142 aa17.77■□□□□ 0.44
ABCF3-204ENST00000463685 ROBO3Q96MS0 1386 aa17.77■□□□□ 0.43
ABCF3-204ENST00000463685 COL2A1P02458 1487 aaPredicted RBP17.76■□□□□ 0.43
ABCF3-204ENST00000463685 PITPNM2Q9BZ72 1349 aa17.76■□□□□ 0.43
ABCF3-204ENST00000463685 B4E1Z4 1266 aa17.76■□□□□ 0.43
ABCF3-204ENST00000463685 SLC3A2P08195 630 aaKnown RBP17.76■□□□□ 0.43
ABCF3-204ENST00000463685 CDK8P49336 464 aa17.76■□□□□ 0.43
ABCF3-204ENST00000463685 NBPF12Q5TAG4 269 aaPredicted RBP17.76■□□□□ 0.43
ABCF3-204ENST00000463685 C16orf86Q6ZW13 317 aa17.76■□□□□ 0.43
ABCF3-204ENST00000463685 KRT26Q7Z3Y9 468 aa17.76■□□□□ 0.43
ABCF3-204ENST00000463685 GLIS2Q9BZE0 524 aaPredicted RBP17.76■□□□□ 0.43
ABCF3-204ENST00000463685 UPF3BQ9BZI7 483 aaKnown RBP17.76■□□□□ 0.43
ABCF3-204ENST00000463685 DNAJC18Q9H819 358 aa17.76■□□□□ 0.43
ABCF3-204ENST00000463685 PI4KBQ9UBF8 816 aa17.76■□□□□ 0.43
ABCF3-204ENST00000463685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
ABCF3-204ENST00000463685 CASTP20810 708 aaKnown RBP17.75■□□□□ 0.43
ABCF3-204ENST00000463685 GABPAQ06546 454 aa17.75■□□□□ 0.43
ABCF3-204ENST00000463685 KRT32Q14532 448 aa17.75■□□□□ 0.43
ABCF3-204ENST00000463685 MAP1SQ66K74 1059 aaPredicted RBP17.75■□□□□ 0.43
ABCF3-204ENST00000463685 MIGA2Q7L4E1 593 aa17.75■□□□□ 0.43
ABCF3-204ENST00000463685 CHST3Q7LGC8 479 aa17.75■□□□□ 0.43
ABCF3-204ENST00000463685 SULF1Q8IWU6 871 aa17.75■□□□□ 0.43
ABCF3-204ENST00000463685 CRACR2BQ8N4Y2 399 aaPredicted RBP17.75■□□□□ 0.43
ABCF3-204ENST00000463685 ZC3H15Q8WU90 426 aaKnown RBP17.75■□□□□ 0.43
ABCF3-204ENST00000463685 IL17RAQ96F46 866 aa17.75■□□□□ 0.43
ABCF3-204ENST00000463685 TCEANC2Q96MN5 208 aa17.75■□□□□ 0.43
ABCF3-204ENST00000463685 NEK1Q96PY6 1258 aa17.75■□□□□ 0.43
ABCF3-204ENST00000463685 SERPINB13Q9UIV8 391 aa17.75■□□□□ 0.43
ABCF3-204ENST00000463685 SHMT1P34896 483 aa17.74■□□□□ 0.43
ABCF3-204ENST00000463685 PDE4BQ07343 736 aa17.74■□□□□ 0.43
ABCF3-204ENST00000463685 FAM47AQ5JRC9 791 aa17.74■□□□□ 0.43
ABCF3-204ENST00000463685 CYB5R4Q7L1T6 521 aa17.74■□□□□ 0.43
ABCF3-204ENST00000463685 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
ABCF3-204ENST00000463685 EHD4Q9H223 541 aa17.74■□□□□ 0.43
ABCF3-204ENST00000463685 RNF41Q9H4P4 317 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-204ENST00000463685 MKNK2Q9HBH9 465 aa17.74■□□□□ 0.43
ABCF3-204ENST00000463685 ORC4O43929 436 aa17.73■□□□□ 0.43
ABCF3-204ENST00000463685 RANBP6O60518 1105 aaKnown RBP17.73■□□□□ 0.43
ABCF3-204ENST00000463685 KDM4AO75164 1064 aa17.73■□□□□ 0.43
ABCF3-204ENST00000463685 FGRP09769 529 aa17.73■□□□□ 0.43
ABCF3-204ENST00000463685 RASA1P20936 1047 aa17.73■□□□□ 0.43
ABCF3-204ENST00000463685 RALYLQ86SE5 291 aaKnown RBP17.73■□□□□ 0.43
ABCF3-204ENST00000463685 FOXP4Q8IVH2 680 aaPredicted RBP17.73■□□□□ 0.43
ABCF3-204ENST00000463685 MB21D2Q8IYB1 491 aaPredicted RBP17.73■□□□□ 0.43
ABCF3-204ENST00000463685 NCOA7Q8NI08 942 aa17.73■□□□□ 0.43
ABCF3-204ENST00000463685 LRRC2Q9BYS8 371 aa17.73■□□□□ 0.43
ABCF3-204ENST00000463685 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.73■□□□□ 0.43
ABCF3-204ENST00000463685 ZSWIM6Q9HCJ5 1215 aa17.73■□□□□ 0.43
ABCF3-204ENST00000463685 FZD1Q9UP38 647 aa17.73■□□□□ 0.43
ABCF3-204ENST00000463685 PSMA5P28066 241 aa17.72■□□□□ 0.43
ABCF3-204ENST00000463685 ANTXR2P58335 489 aa17.72■□□□□ 0.43
ABCF3-204ENST00000463685 FMR1Q06787 632 aaKnown RBP eCLIP17.72■□□□□ 0.43
ABCF3-204ENST00000463685 TRDNQ13061 729 aa17.72■□□□□ 0.43
ABCF3-204ENST00000463685 RRP1BQ14684 758 aaKnown RBP17.72■□□□□ 0.43
ABCF3-204ENST00000463685 SHROOM1Q2M3G4 852 aaPredicted RBP17.72■□□□□ 0.43
ABCF3-204ENST00000463685 BLOC1S2Q6QNY1 142 aa17.72■□□□□ 0.43
ABCF3-204ENST00000463685 METTL16Q86W50 562 aaKnown RBP17.72■□□□□ 0.43
ABCF3-204ENST00000463685 LDHDQ86WU2 507 aa17.72■□□□□ 0.43
ABCF3-204ENST00000463685 TM6SF1Q9BZW5 370 aa17.72■□□□□ 0.43
ABCF3-204ENST00000463685 CNNM2Q9H8M5 875 aa17.72■□□□□ 0.43
ABCF3-204ENST00000463685 GPBP1L1Q9HC44 474 aaPredicted RBP17.72■□□□□ 0.43
ABCF3-204ENST00000463685 PPP2R3BQ9Y5P8 575 aa17.72■□□□□ 0.43
ABCF3-204ENST00000463685 SSC5DA1L4H1 1573 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 TRAF5O00463 557 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 RPS6KB1P23443 525 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 NEK4P51957 841 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 RABEP1Q15276 862 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 RUFY3Q7L099 469 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 CDCA5Q96FF9 252 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 ZKSCAN3Q9BRR0 538 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 KRT23Q9C075 422 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 GPHNQ9NQX3 736 aaPredicted RBP17.71■□□□□ 0.43
ABCF3-204ENST00000463685 ZSWIM5Q9P217 1185 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 SWAP70Q9UH65 585 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 CYP46A1Q9Y6A2 500 aa17.71■□□□□ 0.43
ABCF3-204ENST00000463685 PRC1O43663 620 aa17.7■□□□□ 0.42
ABCF3-204ENST00000463685 GDF11O95390 407 aa17.7■□□□□ 0.42
ABCF3-204ENST00000463685 AKR1B1P15121 316 aa17.7■□□□□ 0.42
ABCF3-204ENST00000463685 JAG1P78504 1218 aa17.7■□□□□ 0.42
ABCF3-204ENST00000463685 TFAP4Q01664 338 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms