RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 IRF6O14896 467 aa10.07□□□□□ -0.8
PGBD2-203ENST00000462488 CTNND1O60716 968 aaKnown RBP10.07□□□□□ -0.8
PGBD2-203ENST00000462488 SLURP2P0DP57 97 aa10.07□□□□□ -0.8
PGBD2-203ENST00000462488 PPIL2Q13356 520 aa10.07□□□□□ -0.8
PGBD2-203ENST00000462488 HDAC1Q13547 482 aaPredicted RBP10.07□□□□□ -0.8
PGBD2-203ENST00000462488 TAF1CQ15572 869 aaPredicted RBP10.07□□□□□ -0.8
PGBD2-203ENST00000462488 GADL1Q6ZQY3 521 aa10.07□□□□□ -0.8
PGBD2-203ENST00000462488 TTC6Q86TZ1 520 aa10.07□□□□□ -0.8
PGBD2-203ENST00000462488 SCYL3Q8IZE3 742 aa10.07□□□□□ -0.8
PGBD2-203ENST00000462488 ZFYVE28Q9HCC9 887 aa10.07□□□□□ -0.8
PGBD2-203ENST00000462488 MCM9Q9NXL9 1143 aa10.07□□□□□ -0.8
PGBD2-203ENST00000462488 ZNF112Q9UJU3 913 aa10.07□□□□□ -0.8
PGBD2-203ENST00000462488 U3KPZ7 1027 aaPredicted RBP10.07□□□□□ -0.8
PGBD2-203ENST00000462488 MYH1P12882 1939 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 TRIM75PA6NK02 468 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 GPR25O00155 361 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 IGF2BP3O00425 579 aaKnown RBP eCLIP10.06□□□□□ -0.8
PGBD2-203ENST00000462488 FKTNO75072 461 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 GLRX3O76003 335 aaKnown RBP10.06□□□□□ -0.8
PGBD2-203ENST00000462488 MBD4O95243 580 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 MX1P20591 662 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 ADD2P35612 726 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 NOL9Q5SY16 702 aaKnown RBP10.06□□□□□ -0.8
PGBD2-203ENST00000462488 FOXP4Q8IVH2 680 aaPredicted RBP10.06□□□□□ -0.8
PGBD2-203ENST00000462488 FSD1Q9BTV5 496 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 LNPKQ9C0E8 428 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 ARMT1Q9H993 441 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 HERC5Q9UII4 1024 aaKnown RBP10.06□□□□□ -0.8
PGBD2-203ENST00000462488 TTC41PQ6P2S7 1318 aa10.06□□□□□ -0.8
PGBD2-203ENST00000462488 RFX7Q2KHR2 1363 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 ATRNL1Q5VV63 1379 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 PHF20L1A8MW92 1017 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 TBC1D12O60347 775 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 ECM2O94769 699 aaPredicted RBP10.05□□□□□ -0.8
PGBD2-203ENST00000462488 APPP05067 770 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 PTPRAP18433 802 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 CRHR2Q13324 411 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 LCORLQ8N3X6 602 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 OTUD7AQ8TE49 926 aaPredicted RBP10.05□□□□□ -0.8
PGBD2-203ENST00000462488 SDR42E1Q8WUS8 393 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 ZNF296Q8WUU4 475 aaPredicted RBP10.05□□□□□ -0.8
PGBD2-203ENST00000462488 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 AS3MTQ9HBK9 375 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 SLC4A4Q9Y6R1 1079 aa10.05□□□□□ -0.8
PGBD2-203ENST00000462488 MYH7P12883 1935 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 CCDC85CA6NKD9 419 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 USP17L5A8MUK1 530 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 TRIM6-TRIM34B2RNG4 842 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 BTBD19C9JJ37 291 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 MPHOSPH10O00566 681 aaKnown RBP10.04□□□□□ -0.8
PGBD2-203ENST00000462488 CXCL11O14625 94 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 GDF11O95390 407 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 ZFYP08048 801 aaPredicted RBP10.04□□□□□ -0.8
PGBD2-203ENST00000462488 UBE3CQ15386 1083 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 IFFO2Q5TF58 517 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 FASTKD5Q7L8L6 764 aaKnown RBP10.04□□□□□ -0.8
PGBD2-203ENST00000462488 CCDC84Q86UT8 332 aaPredicted RBP10.04□□□□□ -0.8
PGBD2-203ENST00000462488 FAM43AQ8N2R8 423 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 KBTBD3Q8NAB2 608 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 MS4A4AQ96JQ5 239 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 PTPN18Q99952 460 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 MCOLN1Q9GZU1 580 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 CABP5Q9NP86 173 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.04□□□□□ -0.8
PGBD2-203ENST00000462488 SERPINB13Q9UIV8 391 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 CDK5RAP2Q96SN8 1893 aa10.04□□□□□ -0.8
PGBD2-203ENST00000462488 TCRBV5S4A2TA0A5A2 114 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 TESPA1A2RU30 521 aaPredicted RBP10.03□□□□□ -0.8
PGBD2-203ENST00000462488 PDHXO00330 501 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 RNF113AO15541 343 aaKnown RBP10.03□□□□□ -0.8
PGBD2-203ENST00000462488 PRKAB2O43741 272 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 ASNSP08243 561 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 CAP2P40123 477 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 SPP2Q13103 211 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 KIF22Q14807 665 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 RAB3GAP1Q15042 981 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 ARHGEF6Q15052 776 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 CERKLQ49MI3 558 aaPredicted RBP10.03□□□□□ -0.8
PGBD2-203ENST00000462488 CTU1Q7Z7A3 348 aaKnown RBP10.03□□□□□ -0.8
PGBD2-203ENST00000462488 ZNF280CQ8ND82 737 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 RILPL2Q969X0 211 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 ERO1AQ96HE7 468 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 FEZ1Q99689 392 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 RIOK1Q9BRS2 568 aaKnown RBP10.03□□□□□ -0.8
PGBD2-203ENST00000462488 R3HDMLQ9H3Y0 253 aa10.03□□□□□ -0.8
PGBD2-203ENST00000462488 COL2A1P02458 1487 aaPredicted RBP10.03□□□□□ -0.8
PGBD2-203ENST00000462488 DOCK1Q14185 1865 aa10.02□□□□□ -0.8
PGBD2-203ENST00000462488 IGHDP01880 384 aa10.02□□□□□ -0.81
PGBD2-203ENST00000462488 CHGBP05060 677 aa10.02□□□□□ -0.81
PGBD2-203ENST00000462488 TDO2P48775 406 aa10.02□□□□□ -0.81
PGBD2-203ENST00000462488 SP3Q02447 781 aa10.02□□□□□ -0.81
PGBD2-203ENST00000462488 MAP3K10Q02779 954 aa10.02□□□□□ -0.81
PGBD2-203ENST00000462488 CHD1LQ86WJ1 897 aa10.02□□□□□ -0.81
PGBD2-203ENST00000462488 STK11IPQ8N1F8 1099 aa10.02□□□□□ -0.81
PGBD2-203ENST00000462488 CD99L2Q8TCZ2 262 aa10.02□□□□□ -0.81
PGBD2-203ENST00000462488 SMCR8Q8TEV9 937 aaPredicted RBP10.02□□□□□ -0.81
PGBD2-203ENST00000462488 APPBP2Q92624 585 aa10.02□□□□□ -0.81
PGBD2-203ENST00000462488 ABHD8Q96I13 439 aa10.02□□□□□ -0.81
PGBD2-203ENST00000462488 PUS7LQ9H0K6 701 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms