RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 IKZF1Q13422 519 aa6.63□□□□□ -1.35
R3HDM1-212ENST00000456040 WDR18Q9BV38 432 aa6.63□□□□□ -1.35
R3HDM1-212ENST00000456040 CEP44Q9C0F1 390 aa6.63□□□□□ -1.35
R3HDM1-212ENST00000456040 SSU72Q9NP77 194 aaKnown RBP6.63□□□□□ -1.35
R3HDM1-212ENST00000456040 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.63□□□□□ -1.35
R3HDM1-212ENST00000456040 LMCD1Q9NZU5 365 aa6.63□□□□□ -1.35
R3HDM1-212ENST00000456040 FAM8A1Q9UBU6 413 aa6.63□□□□□ -1.35
R3HDM1-212ENST00000456040 PPM1HQ9ULR3 514 aa6.63□□□□□ -1.35
R3HDM1-212ENST00000456040 ZNF503-AS2A6NEH8 195 aa6.62□□□□□ -1.35
R3HDM1-212ENST00000456040 PRPF40AO75400 957 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-212ENST00000456040 EAPPQ56P03 285 aaPredicted RBP6.62□□□□□ -1.35
R3HDM1-212ENST00000456040 LCNL1Q6ZST4 164 aa6.62□□□□□ -1.35
R3HDM1-212ENST00000456040 C12orf49Q9H741 205 aa6.62□□□□□ -1.35
R3HDM1-212ENST00000456040 KRT82Q9NSB4 513 aa6.62□□□□□ -1.35
R3HDM1-212ENST00000456040 PCOLCE2Q9UKZ9 415 aa6.62□□□□□ -1.35
R3HDM1-212ENST00000456040 PPP1R9AQ9ULJ8 1098 aa6.62□□□□□ -1.35
R3HDM1-212ENST00000456040 ITIH2P19823 946 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 NME2P22392 152 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 ARNTP27540 789 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 GNA15P30679 374 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 OXCT1P55809 520 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 ID3Q02535 119 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 ZP2Q05996 745 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 TMEM67Q5HYA8 995 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 TPTE2Q6XPS3 522 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 TTLL10Q6ZVT0 673 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 SULF2Q8IWU5 870 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 LIN37Q96GY3 246 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 EMILIN2Q9BXX0 1053 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 ZC3H12CQ9C0D7 883 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 CCDC86Q9H6F5 360 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 CRIM1Q9NZV1 1036 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 SAMM50Q9Y512 469 aa6.61□□□□□ -1.35
R3HDM1-212ENST00000456040 GLI1P08151 1106 aa6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 TMEM253P0C7T8 217 aa6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 LIG1P18858 919 aa6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 BUD31P41223 144 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 PDZD3Q86UT5 571 aa6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 CILP2Q8IUL8 1156 aa6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 KCNB2Q92953 911 aa6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 NECAB3Q96P71 396 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 GZF1Q9H116 711 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 GTF2IRD1Q9UHL9 959 aa6.6□□□□□ -1.35
R3HDM1-212ENST00000456040 USP17L7P0C7H9 530 aa6.59□□□□□ -1.35
R3HDM1-212ENST00000456040 EIF4BP23588 611 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-212ENST00000456040 CTSWP56202 376 aa6.59□□□□□ -1.35
R3HDM1-212ENST00000456040 CCDC27Q2M243 656 aa6.59□□□□□ -1.35
R3HDM1-212ENST00000456040 DNAJC14Q6Y2X3 702 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-212ENST00000456040 C1QL4Q86Z23 238 aa6.59□□□□□ -1.35
R3HDM1-212ENST00000456040 FBXO15Q8NCQ5 510 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-212ENST00000456040 KIRREL1Q96J84 757 aa6.59□□□□□ -1.35
R3HDM1-212ENST00000456040 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
R3HDM1-212ENST00000456040 DUSP23Q9BVJ7 150 aa6.59□□□□□ -1.35
R3HDM1-212ENST00000456040 ENC1O14682 589 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 TMPRSS2O15393 492 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 FBXO24O75426 580 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 C1QTNF9P0C862 333 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 KIF4BQ2VIQ3 1234 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 CIAPIN1Q6FI81 312 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 CYFIP1Q7L576 1253 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 NPAS4Q8IUM7 802 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 STK35Q8TDR2 534 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 WDR89Q96FK6 387 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 DUSP9Q99956 384 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 CBX8Q9HC52 389 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 PRDM7Q9NQW5 492 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 CTNND2Q9UQB3 1225 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 AK5Q9Y6K8 562 aa6.58□□□□□ -1.36
R3HDM1-212ENST00000456040 ZNF862O60290 1169 aa6.57□□□□□ -1.36
R3HDM1-212ENST00000456040 ERCC3P19447 782 aa6.57□□□□□ -1.36
R3HDM1-212ENST00000456040 LRRC14Q15048 493 aa6.57□□□□□ -1.36
R3HDM1-212ENST00000456040 MAP1SQ66K74 1059 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-212ENST00000456040 PRR23BQ6ZRT6 265 aa6.57□□□□□ -1.36
R3HDM1-212ENST00000456040 AMIGO3Q86WK7 504 aa6.57□□□□□ -1.36
R3HDM1-212ENST00000456040 PLAGL2Q9UPG8 496 aa6.57□□□□□ -1.36
R3HDM1-212ENST00000456040 LEFTY1O75610 366 aa6.56□□□□□ -1.36
R3HDM1-212ENST00000456040 BMP6P22004 513 aa6.56□□□□□ -1.36
R3HDM1-212ENST00000456040 ZNF252P-AS1Q0IIN9 211 aa6.56□□□□□ -1.36
R3HDM1-212ENST00000456040 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.56□□□□□ -1.36
R3HDM1-212ENST00000456040 TOP6BLQ8N6T0 577 aa6.56□□□□□ -1.36
R3HDM1-212ENST00000456040 ACSBG1Q96GR2 724 aa6.56□□□□□ -1.36
R3HDM1-212ENST00000456040 CCDC120Q96HB5 630 aa6.56□□□□□ -1.36
R3HDM1-212ENST00000456040 TNKS2Q9H2K2 1166 aa6.56□□□□□ -1.36
R3HDM1-212ENST00000456040 TTF2Q9UNY4 1162 aaKnown RBP6.56□□□□□ -1.36
R3HDM1-212ENST00000456040 TCAF2A6NFQ2 919 aa6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 GNAT3A8MTJ3 354 aa6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 NPIPB6E9PJ23 425 aa6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 PAGE1O75459 146 aa6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 HCLS1P14317 486 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 TTLL4Q14679 1199 aa6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 SV2BQ7L1I2 683 aa6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 GPBAR1Q8TDU6 330 aa6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 PARP2Q9UGN5 583 aa6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 CYP8B1Q9UNU6 501 aa6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 PCDHGC5Q9Y5F6 944 aa6.55□□□□□ -1.36
R3HDM1-212ENST00000456040 TRIM37O94972 964 aa6.54□□□□□ -1.36
R3HDM1-212ENST00000456040 CELA3AP09093 270 aa6.54□□□□□ -1.36
R3HDM1-212ENST00000456040 INHBBP09529 407 aa6.54□□□□□ -1.36
R3HDM1-212ENST00000456040 XPCQ01831 940 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms