RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 FZD1Q9UP38 647 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 JAG2Q9Y219 1238 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 LEMD3Q9Y2U8 911 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 PCDHAC2Q9Y5I4 1007 aa5.96□□□□□ -1.46
GTF3C3-208ENST00000455546 ZNF646O15015 1829 aaPredicted RBP5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 MAGEB6P1A0A0J9YX57 407 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 F8W031 263 aaPredicted RBP5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 WNT10BO00744 389 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 SASH1O94885 1247 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 ZEB1P37275 1124 aaPredicted RBP5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 KCNJ4P48050 445 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 IFIT5Q13325 482 aaKnown RBP5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 DGKZQ13574 1117 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 STRIP1Q5VSL9 837 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 LMBR1LQ6UX01 489 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 OGFOD1Q8N543 542 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 ARHGAP9Q9BRR9 750 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 PUS3Q9BZE2 481 aaKnown RBP5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 MCOLN1Q9GZU1 580 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 ANKRD2Q9GZV1 360 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 CD209Q9NNX6 404 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 PCDHB9Q9Y5E1 797 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 THSD7BQ9C0I4 1608 aa5.95□□□□□ -1.46
GTF3C3-208ENST00000455546 MED23Q9ULK4 1368 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 PALM3A6NDB9 673 aaPredicted RBP5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 GRM8O00222 908 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 TBC1D8O95759 1140 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 PTK2Q05397 1052 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 AGERQ15109 404 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 LDHAL6AQ6ZMR3 332 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 TBC1D9Q6ZT07 1266 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 RASAL3Q86YV0 1011 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 CERS5Q8N5B7 392 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 ARMC2Q8NEN0 867 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 FOXJ1Q92949 421 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 PPP1R12CQ9BZL4 782 aa5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 C9orf78Q9NZ63 289 aaPredicted RBP5.94□□□□□ -1.46
GTF3C3-208ENST00000455546 RNF223E7ERA6 249 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 CA12O43570 354 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 NBPF7P0C2Y1 421 aaPredicted RBP5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 RBM5P52756 815 aaKnown RBP eCLIP5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 PTPN12Q05209 780 aaKnown RBP5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 CCDC57Q2TAC2 916 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 TAF7LQ5H9L4 462 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 PLA2G2CQ5R387 149 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 PDXDC2PQ6P474 469 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 ADAM32Q8TC27 787 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 KAZALD1Q96I82 304 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 SUCLG2Q96I99 432 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 PRMT6Q96LA8 375 aaPredicted RBP5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 CNNM1Q9NRU3 951 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 TFIP11Q9UBB9 837 aaKnown RBP5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 AOX1Q06278 1338 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 PITPNM2Q9BZ72 1349 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 IRS2Q9Y4H2 1338 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 A0A1B0GUL6 1792 aa5.93□□□□□ -1.46
GTF3C3-208ENST00000455546 AK9Q5TCS8 1911 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 CLRN2A0PK11 232 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 SOX11P35716 441 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 GYG1P46976 350 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 DLGAP5Q15398 846 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 CFAP100Q494V2 611 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 SH3BP5LQ7L8J4 393 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 ZBTB33Q86T24 672 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 RETREG2Q8NC44 543 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 FAM174AQ8TBP5 190 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 GPKOWQ92917 476 aaPredicted RBP eCLIP5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 ZBED3Q96IU2 234 aaPredicted RBP5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 SRCIN1Q9C0H9 1055 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 R3HDMLQ9H3Y0 253 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 HDAC9Q9UKV0 1011 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 ANGEL1Q9UNK9 670 aaKnown RBP5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 IQSEC3Q9UPP2 1182 aaPredicted RBP5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 MYO3BQ8WXR4 1341 aa5.92□□□□□ -1.46
GTF3C3-208ENST00000455546 PAPPA2Q9BXP8 1791 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 ECM29Q5VYK3 1845 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 ALDH1L1O75891 902 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 SKIP12755 728 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 IL1R1P14778 569 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 NF2P35240 595 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 TM4SF4P48230 202 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 FKBP1BP68106 108 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 MLLT1Q03111 559 aaPredicted RBP5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 GRIK5Q16478 980 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 LRRC24Q50LG9 513 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 C4orf48Q5BLP8 95 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 NBPF12Q5TAG4 269 aaPredicted RBP5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 PPP1R18Q6NYC8 613 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 C15orf52Q6ZUT6 534 aaKnown RBP5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 ARMC9Q7Z3E5 817 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 ZNF804AQ7Z570 1209 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 DEPDC4Q8N2C3 294 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 ZNF511Q8NB15 262 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 TDRD7Q8NHU6 1098 aaKnown RBP5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 KLHDC4Q8TBB5 520 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 CLMNQ96JQ2 1002 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 FAM84BQ96KN1 310 aaPredicted RBP5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 DEFB129Q9H1M3 183 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 BICC1Q9H694 974 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms