RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 RBSNQ9H1K0 784 aa5.38□□□□□ -1.55
RBM39-220ENST00000455343 SRA1Q9HD15 236 aaKnown RBP5.38□□□□□ -1.55
RBM39-220ENST00000455343 FAM13BQ9NYF5 915 aa5.38□□□□□ -1.55
RBM39-220ENST00000455343 POLD1P28340 1107 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 ZAP70P43403 619 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 NAA30Q147X3 362 aaPredicted RBP5.37□□□□□ -1.55
RBM39-220ENST00000455343 ARTNQ5T4W7 220 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 GDF6Q6KF10 455 aaPredicted RBP5.37□□□□□ -1.55
RBM39-220ENST00000455343 IL22RA1Q8N6P7 574 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 KCNH5Q8NCM2 988 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 OR13H1Q8NG92 308 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 PBXIP1Q96AQ6 731 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 TRIM33Q9UPN9 1127 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 PNPLA7Q6ZV29 1317 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 ADCY9O60503 1353 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 CCDC7Q96M83 1385 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 USP6P35125 1406 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 PPIP5K1Q6PFW1 1433 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 PAPPAQ13219 1627 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 SHANK3Q9BYB0 1731 aa5.37□□□□□ -1.55
RBM39-220ENST00000455343 MAP4K3Q8IVH8 894 aa5.36□□□□□ -1.55
RBM39-220ENST00000455343 DNAJC5GQ8N7S2 189 aa5.36□□□□□ -1.55
RBM39-220ENST00000455343 ACSBG1Q96GR2 724 aa5.36□□□□□ -1.55
RBM39-220ENST00000455343 ZFP64Q9NPA5 681 aa5.36□□□□□ -1.55
RBM39-220ENST00000455343 STIM2Q9P246 746 aa5.36□□□□□ -1.55
RBM39-220ENST00000455343 CPSF1Q10570 1443 aaKnown RBP5.36□□□□□ -1.55
RBM39-220ENST00000455343 TNS2Q63HR2 1409 aa5.36□□□□□ -1.55
RBM39-220ENST00000455343 ATP10DQ9P241 1426 aa5.36□□□□□ -1.55
RBM39-220ENST00000455343 TTC21BQ7Z4L5 1316 aa5.35□□□□□ -1.55
RBM39-220ENST00000455343 ZBTB7CA1YPR0 619 aa5.35□□□□□ -1.55
RBM39-220ENST00000455343 HYAL2Q12891 473 aa5.35□□□□□ -1.55
RBM39-220ENST00000455343 COL13A1Q5TAT6 717 aaPredicted RBP5.35□□□□□ -1.55
RBM39-220ENST00000455343 CACTIN-AS1Q8N1I8 211 aa5.35□□□□□ -1.55
RBM39-220ENST00000455343 GPR152Q8TDT2 470 aa5.35□□□□□ -1.55
RBM39-220ENST00000455343 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
RBM39-220ENST00000455343 ZMYND15Q9H091 742 aa5.35□□□□□ -1.55
RBM39-220ENST00000455343 MRPL18Q9H0U6 180 aaKnown RBP5.35□□□□□ -1.55
RBM39-220ENST00000455343 SBF2Q86WG5 1849 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 COL18A1P39060 1754 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 TOPAZ1Q8N9V7 1692 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 F8W735 103 aaPredicted RBP5.34□□□□□ -1.55
RBM39-220ENST00000455343 ZBTB39O15060 712 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 KIF4AO95239 1232 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 IL2RBP14784 551 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 ATP2B4P23634 1241 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 ATP11AP98196 1134 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 LRP8Q14114 963 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 SETDB1Q15047 1291 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 Q6ZS46 218 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 DZIP1LQ8IYY4 767 aaKnown RBP5.34□□□□□ -1.55
RBM39-220ENST00000455343 TMEM130Q8N3G9 435 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 CCDC97Q96F63 343 aaPredicted RBP5.34□□□□□ -1.55
RBM39-220ENST00000455343 AKTIPQ9H8T0 292 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 TFCP2L1Q9NZI6 479 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 FNDC3AQ9Y2H6 1198 aaKnown RBP5.34□□□□□ -1.55
RBM39-220ENST00000455343 CD2APQ9Y5K6 639 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 CHD4Q14839 1912 aa5.34□□□□□ -1.55
RBM39-220ENST00000455343 ITSN1Q15811 1721 aa5.34□□□□□ -1.56
RBM39-220ENST00000455343 ARHGEF28Q8N1W1 1705 aaKnown RBP5.34□□□□□ -1.56
RBM39-220ENST00000455343 TTC21AQ8NDW8 1320 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 CENPJQ9HC77 1338 aaPredicted RBP5.33□□□□□ -1.56
RBM39-220ENST00000455343 ALX3O95076 343 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 TTC39BQ5VTQ0 682 aaPredicted RBP5.33□□□□□ -1.56
RBM39-220ENST00000455343 PRR23CQ6ZRP0 262 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 COL23A1Q86Y22 540 aaPredicted RBP5.33□□□□□ -1.56
RBM39-220ENST00000455343 SPACA7Q96KW9 195 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 MUC3BQ9H195 1237 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 ABI2Q9NYB9 513 aaPredicted RBP5.33□□□□□ -1.56
RBM39-220ENST00000455343 SEPT3Q9UH03 358 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 SERPINA10Q9UK55 444 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 PPME1Q9Y570 386 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 TRPM1Q7Z4N2 1603 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 PCNTO95613 3336 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 ABCC6O95255 1503 aa5.33□□□□□ -1.56
RBM39-220ENST00000455343 USP31Q70CQ4 1352 aa5.32□□□□□ -1.56
RBM39-220ENST00000455343 RAB3GAP2Q9H2M9 1393 aa5.32□□□□□ -1.56
RBM39-220ENST00000455343 COL24A1Q17RW2 1714 aa5.32□□□□□ -1.56
RBM39-220ENST00000455343 CEP135Q66GS9 1140 aa5.32□□□□□ -1.56
RBM39-220ENST00000455343 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.32□□□□□ -1.56
RBM39-220ENST00000455343 NLRP2Q9NX02 1062 aa5.32□□□□□ -1.56
RBM39-220ENST00000455343 NFAT5O94916 1531 aa5.32□□□□□ -1.56
RBM39-220ENST00000455343 NSD2O96028 1365 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 ANKRD36BQ8N2N9 1353 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 NHSQ6T4R5 1651 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 LINC01387J3KSC0 135 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 SMNDC1O75940 238 aaKnown RBP eCLIP5.31□□□□□ -1.564e-11■□□□□ 10.4
RBM39-220ENST00000455343 CYP2E1P05181 493 aaPredicted RBP5.31□□□□□ -1.56
RBM39-220ENST00000455343 CDC27P30260 824 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 SCNN1AP37088 669 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 PDE12Q6L8Q7 609 aaKnown RBP5.31□□□□□ -1.56
RBM39-220ENST00000455343 ADAMTSL4Q6UY14 1074 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 ATCAYQ86WG3 371 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 AGGF1Q8N302 714 aaeCLIP5.31□□□□□ -1.564e-21■□□□□ 8
RBM39-220ENST00000455343 JMYQ8N9B5 988 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 GALNT11Q8NCW6 608 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 HELQQ8TDG4 1101 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 PSMG3-AS1Q96PY0 264 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 LACRTQ9GZZ8 138 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 RASSF4Q9H2L5 321 aa5.31□□□□□ -1.56
RBM39-220ENST00000455343 HYAL3O43820 417 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms