RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 PICALMQ13492 652 aa21.45■■□□□ 1.02
UBE2D4-209ENST00000454428 ZNF384Q8TF68 577 aa21.45■■□□□ 1.02
UBE2D4-209ENST00000454428 TRIB2Q92519 343 aa21.45■■□□□ 1.02
UBE2D4-209ENST00000454428 FAM163AQ96GL9 167 aaPredicted RBP21.45■■□□□ 1.02
UBE2D4-209ENST00000454428 SIL1Q9H173 461 aa21.45■■□□□ 1.02
UBE2D4-209ENST00000454428 MRS2Q9HD23 443 aa21.45■■□□□ 1.02
UBE2D4-209ENST00000454428 GNL3LQ9NVN8 582 aaKnown RBP21.45■■□□□ 1.02
UBE2D4-209ENST00000454428 CIAO1O76071 339 aa21.44■■□□□ 1.02
UBE2D4-209ENST00000454428 GCLCP48506 637 aaPredicted RBP21.44■■□□□ 1.02
UBE2D4-209ENST00000454428 RHBDL3P58872 404 aa21.44■■□□□ 1.02
UBE2D4-209ENST00000454428 SPP2Q13103 211 aa21.44■■□□□ 1.02
UBE2D4-209ENST00000454428 RRP1BQ14684 758 aaKnown RBP21.44■■□□□ 1.02
UBE2D4-209ENST00000454428 MAP3K21Q5TCX8 1036 aa21.44■■□□□ 1.02
UBE2D4-209ENST00000454428 PTPRCP08575 1304 aa21.44■■□□□ 1.02
UBE2D4-209ENST00000454428 BTDP43251 543 aa21.43■■□□□ 1.02
UBE2D4-209ENST00000454428 RASGRF1Q13972 1273 aa21.43■■□□□ 1.02
UBE2D4-209ENST00000454428 CCDC102BQ68D86 513 aa21.43■■□□□ 1.02
UBE2D4-209ENST00000454428 ASCC2Q9H1I8 757 aaPredicted RBP21.43■■□□□ 1.02
UBE2D4-209ENST00000454428 MROH7-TTC4A0A0A0MT08 1334 aa21.42■■□□□ 1.02
UBE2D4-209ENST00000454428 PEX10O60683 326 aa21.42■■□□□ 1.02
UBE2D4-209ENST00000454428 COL6A1P12109 1028 aa21.42■■□□□ 1.02
UBE2D4-209ENST00000454428 HMGCS2P54868 508 aa21.42■■□□□ 1.02
UBE2D4-209ENST00000454428 ZNF280CQ8ND82 737 aa21.42■■□□□ 1.02
UBE2D4-209ENST00000454428 UBE2OQ9C0C9 1292 aaKnown RBP21.42■■□□□ 1.02
UBE2D4-209ENST00000454428 CEP126Q9P2H0 1117 aa21.42■■□□□ 1.02
UBE2D4-209ENST00000454428 FBXO3Q9UK99 471 aa21.42■■□□□ 1.02
UBE2D4-209ENST00000454428 COL2A1P02458 1487 aaPredicted RBP21.41■■□□□ 1.02
UBE2D4-209ENST00000454428 DZIP1Q86YF9 867 aaKnown RBP21.41■■□□□ 1.02
UBE2D4-209ENST00000454428 ZGPATQ8N5A5 531 aaKnown RBP21.41■■□□□ 1.02
UBE2D4-209ENST00000454428 MORF4L1Q9UBU8 362 aa21.41■■□□□ 1.02
UBE2D4-209ENST00000454428 SIPA1L1O43166 1804 aa21.41■■□□□ 1.02
UBE2D4-209ENST00000454428 MUC3AQ02505 3323 aa21.4■■□□□ 1.02
UBE2D4-209ENST00000454428 ZNF521Q96K83 1311 aa21.4■■□□□ 1.02
UBE2D4-209ENST00000454428 GPR75-ASB3A0A0A6YYF3 556 aa21.4■■□□□ 1.02
UBE2D4-209ENST00000454428 PRKAR2AP13861 404 aaKnown RBP21.4■■□□□ 1.02
UBE2D4-209ENST00000454428 SH3D19Q5HYK7 790 aa21.4■■□□□ 1.02
UBE2D4-209ENST00000454428 OSBPL5Q9H0X9 879 aaPredicted RBP21.4■■□□□ 1.02
UBE2D4-209ENST00000454428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.4■■□□□ 1.02
UBE2D4-209ENST00000454428 ABCF2Q9UG63 623 aa21.4■■□□□ 1.02
UBE2D4-209ENST00000454428 PDS5AQ29RF7 1337 aaKnown RBP21.39■■□□□ 1.01
UBE2D4-209ENST00000454428 NPM3O75607 178 aaKnown RBP21.39■■□□□ 1.01
UBE2D4-209ENST00000454428 CYP2B6P20813 491 aa21.39■■□□□ 1.01
UBE2D4-209ENST00000454428 SSH1Q8WYL5 1049 aa21.39■■□□□ 1.01
UBE2D4-209ENST00000454428 GUCD1Q96NT3 240 aa21.39■■□□□ 1.01
UBE2D4-209ENST00000454428 PA2G4Q9UQ80 394 aaKnown RBP21.39■■□□□ 1.01
UBE2D4-209ENST00000454428 POTEB2H3BUK9 544 aa21.38■■□□□ 1.01
UBE2D4-209ENST00000454428 CAP2P40123 477 aa21.38■■□□□ 1.01
UBE2D4-209ENST00000454428 MECOMQ03112 1051 aa21.38■■□□□ 1.01
UBE2D4-209ENST00000454428 LRRC26Q2I0M4 334 aa21.38■■□□□ 1.01
UBE2D4-209ENST00000454428 TXNRD2Q9NNW7 524 aa21.38■■□□□ 1.01
UBE2D4-209ENST00000454428 FRMPD3Q5JV73 1810 aa21.38■■□□□ 1.01
UBE2D4-209ENST00000454428 IL15P40933 162 aaPredicted RBP21.37■■□□□ 1.01
UBE2D4-209ENST00000454428 LHX8Q68G74 356 aa21.37■■□□□ 1.01
UBE2D4-209ENST00000454428 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.37■■□□□ 1.01
UBE2D4-209ENST00000454428 SLF2Q8IX21 1173 aa21.37■■□□□ 1.01
UBE2D4-209ENST00000454428 USP6NLQ92738 828 aa21.37■■□□□ 1.01
UBE2D4-209ENST00000454428 XRCC5P13010 732 aaKnown RBP21.36■■□□□ 1.01
UBE2D4-209ENST00000454428 TIMM10P62072 90 aa21.36■■□□□ 1.01
UBE2D4-209ENST00000454428 JAG1P78504 1218 aa21.36■■□□□ 1.01
UBE2D4-209ENST00000454428 MDM2Q00987 491 aaPredicted RBP21.36■■□□□ 1.01
UBE2D4-209ENST00000454428 CACNB2Q08289 660 aaPredicted RBP21.36■■□□□ 1.01
UBE2D4-209ENST00000454428 PABPC4Q13310 644 aaKnown RBP eCLIP21.36■■□□□ 1.01
UBE2D4-209ENST00000454428 POTEEQ6S8J3 1075 aa21.36■■□□□ 1.01
UBE2D4-209ENST00000454428 TBC1D2Q9BYX2 928 aa21.36■■□□□ 1.01
UBE2D4-209ENST00000454428 MAST2Q6P0Q8 1798 aa21.36■■□□□ 1.01
UBE2D4-209ENST00000454428 USP17L5A8MUK1 530 aa21.35■■□□□ 1.01
UBE2D4-209ENST00000454428 CCND3P30281 292 aaPredicted RBP21.35■■□□□ 1.01
UBE2D4-209ENST00000454428 P2RX7Q99572 595 aaKnown RBP21.35■■□□□ 1.01
UBE2D4-209ENST00000454428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.35■■□□□ 1.01
UBE2D4-209ENST00000454428 CCL14Q16627 93 aa21.34■■□□□ 1.01
UBE2D4-209ENST00000454428 SPTY2D1Q68D10 685 aaPredicted RBP21.34■■□□□ 1.01
UBE2D4-209ENST00000454428 FAM109BQ6ICB4 259 aaPredicted RBP21.34■■□□□ 1.01
UBE2D4-209ENST00000454428 NUDT12Q9BQG2 462 aa21.34■■□□□ 1.01
UBE2D4-209ENST00000454428 COPRSQ9NQ92 184 aa21.34■■□□□ 1.01
UBE2D4-209ENST00000454428 HOXA7P31268 230 aaPredicted RBP21.33■■□□□ 1.01
UBE2D4-209ENST00000454428 MTMR2Q13614 643 aa21.33■■□□□ 1.01
UBE2D4-209ENST00000454428 ERICH6Q7L0X2 663 aa21.33■■□□□ 1.01
UBE2D4-209ENST00000454428 NSUN4Q96CB9 384 aaKnown RBP21.33■■□□□ 1.01
UBE2D4-209ENST00000454428 WDR18Q9BV38 432 aa21.33■■□□□ 1.01
UBE2D4-209ENST00000454428 RBPJLQ9UBG7 517 aa21.33■■□□□ 1.01
UBE2D4-209ENST00000454428 UBTFL1P0CB47 393 aaPredicted RBP21.32■■□□□ 1
UBE2D4-209ENST00000454428 BACE1P56817 501 aa21.32■■□□□ 1
UBE2D4-209ENST00000454428 HERVK_113P62684 666 aa21.32■■□□□ 1
UBE2D4-209ENST00000454428 SHROOM1Q2M3G4 852 aaPredicted RBP21.32■■□□□ 1
UBE2D4-209ENST00000454428 Q3C1V9 767 aa21.32■■□□□ 1
UBE2D4-209ENST00000454428 MORN1Q5T089 497 aa21.32■■□□□ 1
UBE2D4-209ENST00000454428 PI16Q6UXB8 463 aa21.32■■□□□ 1
UBE2D4-209ENST00000454428 SOCS4Q8WXH5 440 aa21.32■■□□□ 1
UBE2D4-209ENST00000454428 XAGE2Q96GT9 111 aa21.32■■□□□ 1
UBE2D4-209ENST00000454428 PORCNQ9H237 461 aa21.32■■□□□ 1
UBE2D4-209ENST00000454428 A0A1B0GUL7 405 aa21.31■■□□□ 1
UBE2D4-209ENST00000454428 ZKSCAN1P17029 563 aaPredicted RBP21.31■■□□□ 1
UBE2D4-209ENST00000454428 IRX3P78415 501 aaPredicted RBP21.31■■□□□ 1
UBE2D4-209ENST00000454428 GPRC5AQ8NFJ5 357 aa21.31■■□□□ 1
UBE2D4-209ENST00000454428 DNAJC18Q9H819 358 aa21.31■■□□□ 1
UBE2D4-209ENST00000454428 HMG20BQ9P0W2 317 aa21.31■■□□□ 1
UBE2D4-209ENST00000454428 CDK5RAP2Q96SN8 1893 aa21.3■■□□□ 1
UBE2D4-209ENST00000454428 LTBP2Q14767 1821 aa21.3■■□□□ 1
UBE2D4-209ENST00000454428 MAP4K4O95819 1239 aaPredicted RBP21.3■■□□□ 1
UBE2D4-209ENST00000454428 TBC1D9Q6ZT07 1266 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms