RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 INPP5BP32019 993 aa33.62■■■□□ 2.97
SMARCC1-203ENST00000454240 NOGQ13253 232 aa33.62■■■□□ 2.97
SMARCC1-203ENST00000454240 ZKSCAN4Q969J2 545 aaPredicted RBP33.62■■■□□ 2.97
SMARCC1-203ENST00000454240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.62■■■□□ 2.97
SMARCC1-203ENST00000454240 CSADQ9Y600 493 aa33.62■■■□□ 2.97
SMARCC1-203ENST00000454240 SDSP20132 328 aa33.61■■■□□ 2.97
SMARCC1-203ENST00000454240 MAP2K2P36507 400 aa33.61■■■□□ 2.97
SMARCC1-203ENST00000454240 HELLSQ9NRZ9 838 aa33.61■■■□□ 2.97
SMARCC1-203ENST00000454240 MCM9Q9NXL9 1143 aa33.61■■■□□ 2.97
SMARCC1-203ENST00000454240 FAM196BA6NMK8 535 aa33.6■■■□□ 2.97
SMARCC1-203ENST00000454240 GNAT2P19087 354 aa33.6■■■□□ 2.97
SMARCC1-203ENST00000454240 TTC6Q86TZ1 520 aa33.6■■■□□ 2.97
SMARCC1-203ENST00000454240 SKAP1Q86WV1 359 aa33.6■■■□□ 2.97
SMARCC1-203ENST00000454240 SNCAIPQ9Y6H5 919 aa33.6■■■□□ 2.97
SMARCC1-203ENST00000454240 GSG1L2A8MUP6 293 aa33.59■■■□□ 2.97
SMARCC1-203ENST00000454240 SLC4A8Q2Y0W8 1093 aa33.59■■■□□ 2.97
SMARCC1-203ENST00000454240 FAM227BQ96M60 508 aa33.59■■■□□ 2.97
SMARCC1-203ENST00000454240 EHD4Q9H223 541 aa33.59■■■□□ 2.97
SMARCC1-203ENST00000454240 ELP3Q9H9T3 547 aa33.59■■■□□ 2.97
SMARCC1-203ENST00000454240 LAMB1P07942 1786 aa33.59■■■□□ 2.97
SMARCC1-203ENST00000454240 POLR3DP05423 398 aaPredicted RBP33.58■■■□□ 2.97
SMARCC1-203ENST00000454240 PLCD1P51178 756 aa33.58■■■□□ 2.97
SMARCC1-203ENST00000454240 NOL9Q5SY16 702 aaKnown RBP33.58■■■□□ 2.97
SMARCC1-203ENST00000454240 SPRYD7Q5W111 196 aa33.58■■■□□ 2.97
SMARCC1-203ENST00000454240 GIMAP6Q6P9H5 292 aa33.58■■■□□ 2.97
SMARCC1-203ENST00000454240 ZIC5Q96T25 663 aa33.58■■■□□ 2.97
SMARCC1-203ENST00000454240 DNAJC18Q9H819 358 aa33.58■■■□□ 2.97
SMARCC1-203ENST00000454240 DOCK1Q14185 1865 aa33.57■■■□□ 2.96
SMARCC1-203ENST00000454240 A0A0D9SFI3 127 aa33.57■■■□□ 2.96
SMARCC1-203ENST00000454240 NMIQ13287 307 aaPredicted RBP33.57■■■□□ 2.96
SMARCC1-203ENST00000454240 MCMDC2Q4G0Z9 681 aa33.57■■■□□ 2.96
SMARCC1-203ENST00000454240 WNK4Q96J92 1243 aa33.57■■■□□ 2.96
SMARCC1-203ENST00000454240 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.57■■■□□ 2.96
SMARCC1-203ENST00000454240 ATAD5Q96QE3 1844 aa33.56■■■□□ 2.96
SMARCC1-203ENST00000454240 PATL2C9JE40 543 aaKnown RBP33.56■■■□□ 2.96
SMARCC1-203ENST00000454240 CRACR2BQ8N4Y2 399 aaPredicted RBP33.56■■■□□ 2.96
SMARCC1-203ENST00000454240 DDRGK1Q96HY6 314 aa33.56■■■□□ 2.96
SMARCC1-203ENST00000454240 SERPINB13Q9UIV8 391 aa33.56■■■□□ 2.96
SMARCC1-203ENST00000454240 HIP1O00291 1037 aa33.55■■■□□ 2.96
SMARCC1-203ENST00000454240 CTNND1O60716 968 aaKnown RBP33.55■■■□□ 2.96
SMARCC1-203ENST00000454240 ZBTB48P10074 688 aaPredicted RBP33.55■■■□□ 2.96
SMARCC1-203ENST00000454240 GJA5P36382 358 aa33.55■■■□□ 2.96
SMARCC1-203ENST00000454240 CCDC129Q6ZRS4 1044 aa33.55■■■□□ 2.96
SMARCC1-203ENST00000454240 OPTNQ96CV9 577 aa33.55■■■□□ 2.96
SMARCC1-203ENST00000454240 SPDYE5A6NIY4 337 aa33.54■■■□□ 2.96
SMARCC1-203ENST00000454240 USP17L12C9JPN9 530 aa33.54■■■□□ 2.96
SMARCC1-203ENST00000454240 USP17L21D6R901 530 aa33.54■■■□□ 2.96
SMARCC1-203ENST00000454240 KIF23Q02241 960 aaPredicted RBP33.54■■■□□ 2.96
SMARCC1-203ENST00000454240 EVX2Q03828 476 aa33.54■■■□□ 2.96
SMARCC1-203ENST00000454240 ERO1BQ86YB8 467 aa33.54■■■□□ 2.96
SMARCC1-203ENST00000454240 TRIM34Q9BYJ4 488 aa33.54■■■□□ 2.96
SMARCC1-203ENST00000454240 CYP2D6P10635 497 aa33.53■■■□□ 2.96
SMARCC1-203ENST00000454240 GABPAQ06546 454 aa33.53■■■□□ 2.96
SMARCC1-203ENST00000454240 RRP1BQ14684 758 aaKnown RBP33.53■■■□□ 2.96
SMARCC1-203ENST00000454240 C12orf60Q5U649 245 aa33.53■■■□□ 2.96
SMARCC1-203ENST00000454240 CTR9Q6PD62 1173 aa33.53■■■□□ 2.96
SMARCC1-203ENST00000454240 SCYL3Q8IZE3 742 aa33.53■■■□□ 2.96
SMARCC1-203ENST00000454240 CNKSR2Q8WXI2 1034 aa33.53■■■□□ 2.96
SMARCC1-203ENST00000454240 EPB41L4AQ9HCS5 686 aaPredicted RBP33.53■■■□□ 2.96
SMARCC1-203ENST00000454240 MKRN3Q13064 507 aaKnown RBP33.52■■■□□ 2.96
SMARCC1-203ENST00000454240 DIAPH3Q9NSV4 1193 aa33.52■■■□□ 2.96
SMARCC1-203ENST00000454240 CAP2P40123 477 aa33.51■■■□□ 2.95
SMARCC1-203ENST00000454240 SBK1Q52WX2 424 aa33.51■■■□□ 2.95
SMARCC1-203ENST00000454240 TATDN1Q6P1N9 297 aa33.51■■■□□ 2.95
SMARCC1-203ENST00000454240 IFNL3Q8IZI9 196 aa33.51■■■□□ 2.95
SMARCC1-203ENST00000454240 ARPP21Q9UBL0 812 aaPredicted RBP33.51■■■□□ 2.95
SMARCC1-203ENST00000454240 PHIPQ8WWQ0 1821 aa33.51■■■□□ 2.95
SMARCC1-203ENST00000454240 FOXP2O15409 715 aa33.5■■■□□ 2.95
SMARCC1-203ENST00000454240 APPP05067 770 aa33.5■■■□□ 2.95
SMARCC1-203ENST00000454240 PPATQ06203 517 aa33.5■■■□□ 2.95
SMARCC1-203ENST00000454240 AMOTL1Q8IY63 956 aa33.5■■■□□ 2.95
SMARCC1-203ENST00000454240 TAOK2Q9UL54 1235 aa33.5■■■□□ 2.95
SMARCC1-203ENST00000454240 MYH8P13535 1937 aa33.49■■■□□ 2.95
SMARCC1-203ENST00000454240 CYP2D7A0A087X1C5 515 aa33.49■■■□□ 2.95
SMARCC1-203ENST00000454240 MAP2K1Q02750 393 aaPredicted RBP33.49■■■□□ 2.95
SMARCC1-203ENST00000454240 CWC27Q6UX04 472 aaKnown RBP33.49■■■□□ 2.95
SMARCC1-203ENST00000454240 ZNF589Q86UQ0 364 aaPredicted RBP33.49■■■□□ 2.95
SMARCC1-203ENST00000454240 REM2Q8IYK8 340 aaPredicted RBP33.49■■■□□ 2.95
SMARCC1-203ENST00000454240 OTUD5Q96G74 571 aa33.49■■■□□ 2.95
SMARCC1-203ENST00000454240 PTPRAP18433 802 aa33.48■■■□□ 2.95
SMARCC1-203ENST00000454240 NACAP1Q9BZK3 213 aa33.48■■■□□ 2.95
SMARCC1-203ENST00000454240 PICK1Q9NRD5 415 aa33.48■■■□□ 2.95
SMARCC1-203ENST00000454240 CCDC171Q6TFL3 1326 aa33.48■■■□□ 2.95
SMARCC1-203ENST00000454240 SMIM22K7EJ46 135 aa33.47■■■□□ 2.95
SMARCC1-203ENST00000454240 SHMT1P34896 483 aa33.47■■■□□ 2.95
SMARCC1-203ENST00000454240 TDO2P48775 406 aa33.47■■■□□ 2.95
SMARCC1-203ENST00000454240 PPIL2Q13356 520 aa33.47■■■□□ 2.95
SMARCC1-203ENST00000454240 VPS53Q5VIR6 699 aa33.47■■■□□ 2.95
SMARCC1-203ENST00000454240 WBP1LQ9NX94 342 aa33.47■■■□□ 2.95
SMARCC1-203ENST00000454240 TM4SF4P48230 202 aa33.46■■■□□ 2.95
SMARCC1-203ENST00000454240 SWAP70Q9UH65 585 aa33.46■■■□□ 2.95
SMARCC1-203ENST00000454240 MANSC4A6NHS7 340 aaPredicted RBP33.45■■■□□ 2.95
SMARCC1-203ENST00000454240 IRF6O14896 467 aa33.45■■■□□ 2.95
SMARCC1-203ENST00000454240 CHMLP26374 656 aa33.45■■■□□ 2.95
SMARCC1-203ENST00000454240 MFAP1P55081 439 aaKnown RBP33.45■■■□□ 2.95
SMARCC1-203ENST00000454240 JAG1P78504 1218 aa33.45■■■□□ 2.95
SMARCC1-203ENST00000454240 BMP2KLQ5H9B9 411 aa33.45■■■□□ 2.95
SMARCC1-203ENST00000454240 DYNLL2Q96FJ2 89 aa33.45■■■□□ 2.95
SMARCC1-203ENST00000454240 GINM1Q9NU53 330 aa33.45■■■□□ 2.95
SMARCC1-203ENST00000454240 INHBEP58166 350 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms