RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 ARIH1Q9Y4X5 557 aaPredicted RBP9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 SLC4A4Q9Y6R1 1079 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 SCN4AP35499 1836 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 DOCK2Q92608 1830 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 MYH2Q9UKX2 1941 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 GSG1L2A8MUP6 293 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 SGSM2O43147 1006 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 ENTPD3O75355 529 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 APPP05067 770 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 USP5P45974 858 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 MFAP1P55081 439 aaKnown RBP9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 TCP10Q12799 353 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 PICALMQ13492 652 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 TNFAIP1Q13829 316 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 RASA3Q14644 834 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 MAP1SQ66K74 1059 aaPredicted RBP9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 CDC37L1Q7L3B6 337 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 KRT26Q7Z3Y9 468 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 USP48Q86UV5 1035 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 FAM83AQ86UY5 434 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 APOBEC3FQ8IUX4 373 aaKnown RBP9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 SULF1Q8IWU6 871 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 SDR42E1Q8WUS8 393 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 FAM151AQ8WW52 585 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 ESYT1Q9BSJ8 1104 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 DEFB129Q9H1M3 183 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 IL25Q9H293 177 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 DCP1AQ9NPI6 582 aaPredicted RBP9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 SCUBE2Q9NQ36 999 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 ATP8A2Q9NTI2 1148 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 MKRN1Q9UHC7 482 aaKnown RBP9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 CCDC171Q6TFL3 1326 aa9.04□□□□□ -0.96
AC004540.1-206ENST00000448056 CNTNAP1P78357 1384 aa9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 HSPD1P10809 573 aaKnown RBP9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 TNNI2P48788 182 aa9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 VPS53Q5VIR6 699 aa9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 LHX8Q68G74 356 aa9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 GIMAP6Q6P9H5 292 aa9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 MAPKAPK5Q8IW41 473 aa9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 TMEM39BQ9GZU3 492 aa9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 OSBPL5Q9H0X9 879 aaPredicted RBP9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 FLT1P17948 1338 aa9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 RAD50Q92878 1312 aa9.03□□□□□ -0.96
AC004540.1-206ENST00000448056 RPAP1Q9BWH6 1393 aaPredicted RBP9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 DDTLA6NHG4 134 aaPredicted RBP9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 ADM5C9JUS6 153 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 FOXP2O15409 715 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 TOMM70O94826 608 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 ALX1Q15699 326 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 PRAMEF18Q5VWM3 479 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 CTR9Q6PD62 1173 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 DLK2Q6UY11 383 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 KIAA1211Q6ZU35 1233 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 SH3BP5LQ7L8J4 393 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 IFNL3Q8IZI9 196 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 DDRGK1Q96HY6 314 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 TEPSINQ96N21 525 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 DSCC1Q9BVC3 393 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 GLIS2Q9BZE0 524 aaPredicted RBP9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 NACAP1Q9BZK3 213 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 DHX36Q9H2U1 1008 aaKnown RBP9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 MCM9Q9NXL9 1143 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 SAP30BPQ9UHR5 308 aaKnown RBP9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 PALD1Q9ULE6 856 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 PPP2R3BQ9Y5P8 575 aa9.02□□□□□ -0.97
AC004540.1-206ENST00000448056 MAST2Q6P0Q8 1798 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 ADAMTSL1Q8N6G6 1762 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 USP17L12C9JPN9 530 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 USP17L21D6R901 530 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 FGAP02671 866 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 POLR3DP05423 398 aaPredicted RBP9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 PTH1RQ03431 593 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 SUPT20HL1Q3ZLR7 823 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 SBK1Q52WX2 424 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 NBPF12Q5TAG4 269 aaPredicted RBP9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 ZSCAN29Q8IWY8 852 aaPredicted RBP9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 SMC1BQ8NDV3 1235 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 RBM46Q8TBY0 533 aaKnown RBP9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 MAP4K1Q92918 833 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 OTUD5Q96G74 571 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 LSG1Q9H089 658 aaKnown RBP9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 EPB41L4AQ9HCS5 686 aaPredicted RBP9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 EMILIN3Q9NT22 766 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 PI4KBQ9UBF8 816 aa9.01□□□□□ -0.97
AC004540.1-206ENST00000448056 TRAF5O00463 557 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 CYP2D6P10635 497 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 TDO2P48775 406 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 PLCD1P51178 756 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 MAP3K10Q02779 954 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 C8orf34Q49A92 452 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 C12orf60Q5U649 245 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 TTC6Q86TZ1 520 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 METTL16Q86W50 562 aaKnown RBP9□□□□□ -0.97
AC004540.1-206ENST00000448056 FOXP4Q8IVH2 680 aaPredicted RBP9□□□□□ -0.97
AC004540.1-206ENST00000448056 CDAN1Q8IWY9 1227 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 SLAIN1Q8ND83 568 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 CDCA5Q96FF9 252 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 CSRNP1Q96S65 589 aa9□□□□□ -0.97
AC004540.1-206ENST00000448056 NAPBQ9H115 298 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms