RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 GAKO14976 1311 aa17.39■□□□□ 0.37
SHANK2-209ENST00000445654 EYA2O00167 538 aa17.38■□□□□ 0.37
SHANK2-209ENST00000445654 MAP4K4O95819 1239 aaPredicted RBP17.38■□□□□ 0.37
SHANK2-209ENST00000445654 CYP2B6P20813 491 aa17.38■□□□□ 0.37
SHANK2-209ENST00000445654 TRIM32Q13049 653 aa17.38■□□□□ 0.37
SHANK2-209ENST00000445654 DZIP1Q86YF9 867 aaKnown RBP17.38■□□□□ 0.37
SHANK2-209ENST00000445654 MAFAQ8NHW3 353 aaPredicted RBP17.38■□□□□ 0.37
SHANK2-209ENST00000445654 ASCC2Q9H1I8 757 aaPredicted RBP17.38■□□□□ 0.37
SHANK2-209ENST00000445654 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
SHANK2-209ENST00000445654 RFX7Q2KHR2 1363 aa17.38■□□□□ 0.37
SHANK2-209ENST00000445654 MYH2Q9UKX2 1941 aa17.37■□□□□ 0.37
SHANK2-209ENST00000445654 NPM3O75607 178 aaKnown RBP17.37■□□□□ 0.37
SHANK2-209ENST00000445654 MAPK4P31152 587 aa17.37■□□□□ 0.37
SHANK2-209ENST00000445654 IRX3P78415 501 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-209ENST00000445654 SPP2Q13103 211 aa17.37■□□□□ 0.37
SHANK2-209ENST00000445654 LRRC26Q2I0M4 334 aa17.37■□□□□ 0.37
SHANK2-209ENST00000445654 SPTY2D1Q68D10 685 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-209ENST00000445654 CCAR1Q8IX12 1150 aaKnown RBP17.37■□□□□ 0.37
SHANK2-209ENST00000445654 ANKRD44Q8N8A2 993 aa17.37■□□□□ 0.37
SHANK2-209ENST00000445654 GTF3C2Q8WUA4 911 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-209ENST00000445654 FAM163AQ96GL9 167 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-209ENST00000445654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.37■□□□□ 0.373e-7■■■□□ 18.8
SHANK2-209ENST00000445654 DDTLA6NHG4 134 aaPredicted RBP17.36■□□□□ 0.37
SHANK2-209ENST00000445654 USP17L5A8MUK1 530 aa17.36■□□□□ 0.37
SHANK2-209ENST00000445654 RGS2P41220 211 aa17.36■□□□□ 0.37
SHANK2-209ENST00000445654 SH3D19Q5HYK7 790 aa17.36■□□□□ 0.37
SHANK2-209ENST00000445654 SH3BP5LQ7L8J4 393 aa17.36■□□□□ 0.37
SHANK2-209ENST00000445654 FAM161BQ96MY7 647 aa17.36■□□□□ 0.37
SHANK2-209ENST00000445654 PLXNB2O15031 1838 aa17.35■□□□□ 0.37
SHANK2-209ENST00000445654 MSCO60682 206 aa17.35■□□□□ 0.37
SHANK2-209ENST00000445654 HMGCS2P54868 508 aa17.35■□□□□ 0.37
SHANK2-209ENST00000445654 PICALMQ13492 652 aa17.35■□□□□ 0.37
SHANK2-209ENST00000445654 ATP2B3Q16720 1220 aa17.35■□□□□ 0.37
SHANK2-209ENST00000445654 GPRC5AQ8NFJ5 357 aa17.35■□□□□ 0.37
SHANK2-209ENST00000445654 CDX2Q99626 313 aaPredicted RBP17.35■□□□□ 0.37
SHANK2-209ENST00000445654 CACNB2Q08289 660 aaPredicted RBP17.34■□□□□ 0.37
SHANK2-209ENST00000445654 KLHDC4Q8TBB5 520 aa17.34■□□□□ 0.37
SHANK2-209ENST00000445654 TMOD4Q9NZQ9 345 aa17.34■□□□□ 0.37
SHANK2-209ENST00000445654 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
SHANK2-209ENST00000445654 MAST2Q6P0Q8 1798 aa17.33■□□□□ 0.37
SHANK2-209ENST00000445654 PDS5AQ29RF7 1337 aaKnown RBP17.33■□□□□ 0.36
SHANK2-209ENST00000445654 GLRX3O76003 335 aaKnown RBP17.33■□□□□ 0.36
SHANK2-209ENST00000445654 HOXA7P31268 230 aaPredicted RBP17.33■□□□□ 0.36
SHANK2-209ENST00000445654 BTDP43251 543 aa17.33■□□□□ 0.36
SHANK2-209ENST00000445654 LHX8Q68G74 356 aa17.33■□□□□ 0.36
SHANK2-209ENST00000445654 APBA2Q99767 749 aa17.33■□□□□ 0.36
SHANK2-209ENST00000445654 CWC22Q9HCG8 908 aaKnown RBP17.33■□□□□ 0.36
SHANK2-209ENST00000445654 MROH7-TTC4A0A0A0MT08 1334 aa17.32■□□□□ 0.36
SHANK2-209ENST00000445654 TMEM265A0A087WTH1 108 aa17.32■□□□□ 0.36
SHANK2-209ENST00000445654 CAP2P40123 477 aa17.32■□□□□ 0.36
SHANK2-209ENST00000445654 CCDC84Q86UT8 332 aaPredicted RBP17.32■□□□□ 0.36
SHANK2-209ENST00000445654 WDR18Q9BV38 432 aa17.32■□□□□ 0.36
SHANK2-209ENST00000445654 SEMA6BQ9H3T3 888 aa17.32■□□□□ 0.36
SHANK2-209ENST00000445654 HERC5Q9UII4 1024 aaKnown RBP17.32■□□□□ 0.36
SHANK2-209ENST00000445654 ATAD5Q96QE3 1844 aa17.32■□□□□ 0.36
SHANK2-209ENST00000445654 CIAO1O76071 339 aa17.31■□□□□ 0.36
SHANK2-209ENST00000445654 LDHCP07864 332 aa17.31■□□□□ 0.36
SHANK2-209ENST00000445654 HERVK_113P62684 666 aa17.31■□□□□ 0.36
SHANK2-209ENST00000445654 SMAD3P84022 425 aaKnown RBP17.31■□□□□ 0.36
SHANK2-209ENST00000445654 MFSD14CQ5VZR4 134 aa17.31■□□□□ 0.36
SHANK2-209ENST00000445654 SENP6Q9GZR1 1112 aaPredicted RBP17.31■□□□□ 0.36
SHANK2-209ENST00000445654 DDX4Q9NQI0 724 aaKnown RBP17.31■□□□□ 0.36
SHANK2-209ENST00000445654 GINM1Q9NU53 330 aa17.31■□□□□ 0.36
SHANK2-209ENST00000445654 ABCF2Q9UG63 623 aa17.31■□□□□ 0.36
SHANK2-209ENST00000445654 PTPRCP08575 1304 aa17.3■□□□□ 0.36
SHANK2-209ENST00000445654 C19orf81C9J6K1 198 aa17.3■□□□□ 0.36
SHANK2-209ENST00000445654 ASNSP08243 561 aa17.3■□□□□ 0.36
SHANK2-209ENST00000445654 CCND3P30281 292 aaPredicted RBP17.3■□□□□ 0.36
SHANK2-209ENST00000445654 GSTO1P78417 241 aa17.3■□□□□ 0.36
SHANK2-209ENST00000445654 PLEKHH3Q7Z736 793 aa17.3■□□□□ 0.36
SHANK2-209ENST00000445654 USP6NLQ92738 828 aa17.3■□□□□ 0.36
SHANK2-209ENST00000445654 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.3■□□□□ 0.36
SHANK2-209ENST00000445654 GPR75-ASB3A0A0A6YYF3 556 aa17.29■□□□□ 0.36
SHANK2-209ENST00000445654 DNM1LO00429 736 aa17.29■□□□□ 0.36
SHANK2-209ENST00000445654 FOSL2P15408 326 aa17.29■□□□□ 0.36
SHANK2-209ENST00000445654 COL9A1P20849 921 aa17.29■□□□□ 0.36
SHANK2-209ENST00000445654 BACE1P56817 501 aa17.29■□□□□ 0.36
SHANK2-209ENST00000445654 ERICH6Q7L0X2 663 aa17.29■□□□□ 0.36
SHANK2-209ENST00000445654 ATG9AQ7Z3C6 839 aa17.29■□□□□ 0.36
SHANK2-209ENST00000445654 P2RX7Q99572 595 aaKnown RBP17.29■□□□□ 0.36
SHANK2-209ENST00000445654 FRMPD3Q5JV73 1810 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 PHKA1P46020 1223 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 RFX5P48382 616 aaPredicted RBP17.28■□□□□ 0.36
SHANK2-209ENST00000445654 ERVK-9P63128 1117 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 ERVK-24P63145 666 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 CCNA1P78396 465 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 MAP2K5Q13163 448 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 TJAP1Q5JTD0 557 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 MORN1Q5T089 497 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 GPR142Q7Z601 462 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 LPAR1Q92633 364 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 HDAC5Q9UQL6 1122 aa17.28■□□□□ 0.36
SHANK2-209ENST00000445654 IL15P40933 162 aaPredicted RBP17.27■□□□□ 0.36
SHANK2-209ENST00000445654 RTP1P59025 263 aa17.27■□□□□ 0.36
SHANK2-209ENST00000445654 MTMR2Q13614 643 aa17.27■□□□□ 0.36
SHANK2-209ENST00000445654 CCDC102BQ68D86 513 aa17.27■□□□□ 0.36
SHANK2-209ENST00000445654 MYLIPQ8WY64 445 aa17.27■□□□□ 0.36
SHANK2-209ENST00000445654 EDC3Q96F86 508 aaKnown RBP17.27■□□□□ 0.36
SHANK2-209ENST00000445654 DDX20Q9UHI6 824 aaKnown RBP17.27■□□□□ 0.36
SHANK2-209ENST00000445654 LTBP2Q14767 1821 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms