RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 AS3MTQ9HBK9 375 aa18.43■□□□□ 0.54
MRPL40-202ENST00000443660 HDAC5Q9UQL6 1122 aa18.43■□□□□ 0.54
MRPL40-202ENST00000443660 USP17L5A8MUK1 530 aa18.42■□□□□ 0.54
MRPL40-202ENST00000443660 NPM3O75607 178 aaKnown RBP18.42■□□□□ 0.54
MRPL40-202ENST00000443660 UBTFL1P0CB47 393 aaPredicted RBP18.42■□□□□ 0.54
MRPL40-202ENST00000443660 CYP2B6P20813 491 aa18.42■□□□□ 0.54
MRPL40-202ENST00000443660 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
MRPL40-202ENST00000443660 MROH7-TTC4A0A0A0MT08 1334 aa18.42■□□□□ 0.54
MRPL40-202ENST00000443660 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
MRPL40-202ENST00000443660 GPR75-ASB3A0A0A6YYF3 556 aa18.41■□□□□ 0.54
MRPL40-202ENST00000443660 FAM196BA6NMK8 535 aa18.41■□□□□ 0.54
MRPL40-202ENST00000443660 MAP4K4O95819 1239 aaPredicted RBP18.41■□□□□ 0.54
MRPL40-202ENST00000443660 LDHCP07864 332 aa18.41■□□□□ 0.54
MRPL40-202ENST00000443660 ADORA1P30542 326 aa18.41■□□□□ 0.54
MRPL40-202ENST00000443660 CAP2P40123 477 aa18.41■□□□□ 0.54
MRPL40-202ENST00000443660 IRX3P78415 501 aaPredicted RBP18.41■□□□□ 0.54
MRPL40-202ENST00000443660 RASGRF1Q13972 1273 aa18.41■□□□□ 0.54
MRPL40-202ENST00000443660 TRMT44Q8IYL2 757 aaKnown RBP18.41■□□□□ 0.54
MRPL40-202ENST00000443660 TRIB2Q92519 343 aa18.41■□□□□ 0.54
MRPL40-202ENST00000443660 NUDT12Q9BQG2 462 aa18.41■□□□□ 0.54
MRPL40-202ENST00000443660 MORF4L1Q9UBU8 362 aa18.41■□□□□ 0.54
MRPL40-202ENST00000443660 ANP32CO43423 234 aa18.4■□□□□ 0.54
MRPL40-202ENST00000443660 PRKAR2AP13861 404 aaKnown RBP18.4■□□□□ 0.54
MRPL40-202ENST00000443660 TIMM10P62072 90 aa18.4■□□□□ 0.54
MRPL40-202ENST00000443660 GSTO1P78417 241 aa18.4■□□□□ 0.54
MRPL40-202ENST00000443660 MECOMQ03112 1051 aa18.4■□□□□ 0.54
MRPL40-202ENST00000443660 SH3D19Q5HYK7 790 aa18.4■□□□□ 0.54
MRPL40-202ENST00000443660 CCAR1Q8IX12 1150 aaKnown RBP18.4■□□□□ 0.54
MRPL40-202ENST00000443660 SSH1Q8WYL5 1049 aa18.4■□□□□ 0.54
MRPL40-202ENST00000443660 PDS5AQ29RF7 1337 aaKnown RBP18.4■□□□□ 0.54
MRPL40-202ENST00000443660 CUL9Q8IWT3 2517 aa18.4■□□□□ 0.54
MRPL40-202ENST00000443660 XRCC5P13010 732 aaKnown RBP18.39■□□□□ 0.53
MRPL40-202ENST00000443660 RHBDL3P58872 404 aa18.39■□□□□ 0.53
MRPL40-202ENST00000443660 PDE3AQ14432 1141 aa18.39■□□□□ 0.53
MRPL40-202ENST00000443660 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
MRPL40-202ENST00000443660 FAM9BQ8IZU0 186 aa18.39■□□□□ 0.53
MRPL40-202ENST00000443660 GPRC5AQ8NFJ5 357 aa18.39■□□□□ 0.53
MRPL40-202ENST00000443660 SOCS4Q8WXH5 440 aa18.39■□□□□ 0.53
MRPL40-202ENST00000443660 TMOD4Q9NZQ9 345 aa18.39■□□□□ 0.53
MRPL40-202ENST00000443660 AKAP2Q9Y2D5 859 aa18.39■□□□□ 0.53
MRPL40-202ENST00000443660 LAMA3Q16787 3333 aa18.38■□□□□ 0.53
MRPL40-202ENST00000443660 ZKSCAN1P17029 563 aaPredicted RBP18.37■□□□□ 0.53
MRPL40-202ENST00000443660 MAPK4P31152 587 aa18.37■□□□□ 0.53
MRPL40-202ENST00000443660 MVPQ14764 893 aaKnown RBP18.37■□□□□ 0.53
MRPL40-202ENST00000443660 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.37■□□□□ 0.53
MRPL40-202ENST00000443660 P2RX7Q99572 595 aaKnown RBP18.37■□□□□ 0.53
MRPL40-202ENST00000443660 COL25A1Q9BXS0 654 aaPredicted RBP18.37■□□□□ 0.53
MRPL40-202ENST00000443660 COPRSQ9NQ92 184 aa18.37■□□□□ 0.53
MRPL40-202ENST00000443660 HERC5Q9UII4 1024 aaKnown RBP18.37■□□□□ 0.53
MRPL40-202ENST00000443660 PA2G4Q9UQ80 394 aaKnown RBP18.37■□□□□ 0.53
MRPL40-202ENST00000443660 PFASO15067 1338 aa18.37■□□□□ 0.53
MRPL40-202ENST00000443660 DOCK2Q92608 1830 aa18.37■□□□□ 0.53
MRPL40-202ENST00000443660 COL6A1P12109 1028 aa18.36■□□□□ 0.53
MRPL40-202ENST00000443660 HOXA7P31268 230 aaPredicted RBP18.36■□□□□ 0.53
MRPL40-202ENST00000443660 BACE1P56817 501 aa18.36■□□□□ 0.53
MRPL40-202ENST00000443660 MDM2Q00987 491 aaPredicted RBP18.36■□□□□ 0.53
MRPL40-202ENST00000443660 CACNB2Q08289 660 aaPredicted RBP18.36■□□□□ 0.53
MRPL40-202ENST00000443660 XAGE2Q96GT9 111 aa18.36■□□□□ 0.53
MRPL40-202ENST00000443660 LBHD1Q9BQE6 289 aaPredicted RBP18.36■□□□□ 0.53
MRPL40-202ENST00000443660 WDR18Q9BV38 432 aa18.36■□□□□ 0.53
MRPL40-202ENST00000443660 MYH13Q9UKX3 1938 aa18.36■□□□□ 0.53
MRPL40-202ENST00000443660 DOCK1Q14185 1865 aa18.35■□□□□ 0.53
MRPL40-202ENST00000443660 A0A1B0GUL7 405 aa18.35■□□□□ 0.53
MRPL40-202ENST00000443660 C19orf81C9J6K1 198 aa18.35■□□□□ 0.53
MRPL40-202ENST00000443660 RGS2P41220 211 aa18.35■□□□□ 0.53
MRPL40-202ENST00000443660 HERVK_113P62684 666 aa18.35■□□□□ 0.53
MRPL40-202ENST00000443660 MTMR2Q13614 643 aa18.35■□□□□ 0.53
MRPL40-202ENST00000443660 GORABQ5T7V8 394 aa18.35■□□□□ 0.53
MRPL40-202ENST00000443660 FAM109BQ6ICB4 259 aaPredicted RBP18.35■□□□□ 0.53
MRPL40-202ENST00000443660 NEUROD6Q96NK8 337 aa18.35■□□□□ 0.53
MRPL40-202ENST00000443660 NOL10Q9BSC4 688 aaKnown RBP18.35■□□□□ 0.53
MRPL40-202ENST00000443660 CWC22Q9HCG8 908 aaKnown RBP18.35■□□□□ 0.53
MRPL40-202ENST00000443660 RAI14Q9P0K7 980 aa18.35■□□□□ 0.53
MRPL40-202ENST00000443660 PI4KBQ9UBF8 816 aa18.35■□□□□ 0.53
MRPL40-202ENST00000443660 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
MRPL40-202ENST00000443660 ASNSP08243 561 aa18.34■□□□□ 0.53
MRPL40-202ENST00000443660 RRP1BQ14684 758 aaKnown RBP18.34■□□□□ 0.53
MRPL40-202ENST00000443660 LRRC26Q2I0M4 334 aa18.34■□□□□ 0.53
MRPL40-202ENST00000443660 ALDH1L2Q3SY69 923 aa18.34■□□□□ 0.53
MRPL40-202ENST00000443660 TEX11Q8IYF3 940 aa18.34■□□□□ 0.53
MRPL40-202ENST00000443660 NSUN4Q96CB9 384 aaKnown RBP18.34■□□□□ 0.53
MRPL40-202ENST00000443660 DHX36Q9H2U1 1008 aaKnown RBP18.34■□□□□ 0.53
MRPL40-202ENST00000443660 E9PSI1 815 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 CCND3P30281 292 aaPredicted RBP18.33■□□□□ 0.52
MRPL40-202ENST00000443660 LHX8Q68G74 356 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 SPATA5Q8NB90 893 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 ZNF384Q8TF68 577 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 GTF3C2Q8WUA4 911 aaPredicted RBP18.33■□□□□ 0.52
MRPL40-202ENST00000443660 TRIM34Q9BYJ4 488 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 TXNRD2Q9NNW7 524 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 SMC4Q9NTJ3 1288 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 HMG20BQ9P0W2 317 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 RBPJLQ9UBG7 517 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 ALPK3Q96L96 1907 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 MYH2Q9UKX2 1941 aa18.33■□□□□ 0.52
MRPL40-202ENST00000443660 ZNF521Q96K83 1311 aa18.32■□□□□ 0.52
MRPL40-202ENST00000443660 USP17L10C9JJH3 530 aa18.32■□□□□ 0.52
MRPL40-202ENST00000443660 TFCP2Q12800 502 aa18.32■□□□□ 0.52
MRPL40-202ENST00000443660 TBC1D9Q6ZT07 1266 aa18.32■□□□□ 0.52
MRPL40-202ENST00000443660 PLEKHH3Q7Z736 793 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms