RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 OTOP1Q7RTM1 612 aa10.67□□□□□ -0.7
USP6NL-203ENST00000443016 SCYL3Q8IZE3 742 aa10.67□□□□□ -0.7
USP6NL-203ENST00000443016 ZNF512BQ96KM6 892 aaPredicted RBP10.67□□□□□ -0.7
USP6NL-203ENST00000443016 NOL9Q5SY16 702 aaKnown RBP10.67□□□□□ -0.7
USP6NL-203ENST00000443016 CLASRPQ8N2M8 674 aaKnown RBP10.67□□□□□ -0.7
USP6NL-203ENST00000443016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.67□□□□□ -0.7
USP6NL-203ENST00000443016 PDE4DIPQ5VU43 2346 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 TLR2O60603 784 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 SLURP2P0DP57 97 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 RGS19P49795 217 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 KIF22Q14807 665 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 RHPN1Q8TCX5 695 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 SH3RF3Q8TEJ3 882 aaPredicted RBP10.66□□□□□ -0.7
USP6NL-203ENST00000443016 OSBPL5Q9H0X9 879 aaPredicted RBP10.66□□□□□ -0.7
USP6NL-203ENST00000443016 ZCCHC17Q9NP64 241 aaKnown RBP10.66□□□□□ -0.7
USP6NL-203ENST00000443016 ZBTB40Q9NUA8 1239 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 RFX7Q2KHR2 1363 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 FAM196BA6NMK8 535 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 PDHXO00330 501 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 CTNND1O60716 968 aaKnown RBP10.66□□□□□ -0.7
USP6NL-203ENST00000443016 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 KCNH4Q9UQ05 1017 aa10.66□□□□□ -0.7
USP6NL-203ENST00000443016 GTPBP6O43824 516 aaPredicted RBP10.65□□□□□ -0.7
USP6NL-203ENST00000443016 IFIT2P09913 472 aaKnown RBP10.65□□□□□ -0.7
USP6NL-203ENST00000443016 PTPRAP18433 802 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 CYP7A1P22680 504 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 ERICH6BQ5W0A0 696 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 TGFBRAP1Q8WUH2 860 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 KIF1BPQ96EK5 621 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 TRIM34Q9BYJ4 488 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 PIH1D3Q9NQM4 214 aaKnown RBP10.65□□□□□ -0.7
USP6NL-203ENST00000443016 NDUFB9Q9Y6M9 179 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 ATRNL1Q5VV63 1379 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 TRIM75PA6NK02 468 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 CXCL11O14625 94 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 IRX6P78412 446 aaPredicted RBP10.65□□□□□ -0.7
USP6NL-203ENST00000443016 MAP3K12Q12852 859 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 FASTKD5Q7L8L6 764 aaKnown RBP10.65□□□□□ -0.7
USP6NL-203ENST00000443016 ANKRD23Q86SG2 305 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 MAPKAPK5Q8IW41 473 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 IL27Q8NEV9 243 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 DHX36Q9H2U1 1008 aaKnown RBP10.65□□□□□ -0.7
USP6NL-203ENST00000443016 PI4KBQ9UBF8 816 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 PTPN22Q9Y2R2 807 aa10.65□□□□□ -0.7
USP6NL-203ENST00000443016 TBC1D12O60347 775 aa10.64□□□□□ -0.71
USP6NL-203ENST00000443016 HMGB1P09429 215 aaKnown RBP10.64□□□□□ -0.71
USP6NL-203ENST00000443016 MAP3K10Q02779 954 aa10.64□□□□□ -0.71
USP6NL-203ENST00000443016 GADL1Q6ZQY3 521 aa10.64□□□□□ -0.71
USP6NL-203ENST00000443016 ADGRA1Q86SQ6 560 aa10.64□□□□□ -0.71
USP6NL-203ENST00000443016 CRACR2BQ8N4Y2 399 aaPredicted RBP10.64□□□□□ -0.71
USP6NL-203ENST00000443016 TNRC18O15417 2968 aaPredicted RBP10.64□□□□□ -0.71
USP6NL-203ENST00000443016 KIAA0100Q14667 2235 aaKnown RBP10.64□□□□□ -0.71
USP6NL-203ENST00000443016 PPP4CP60510 307 aa10.64□□□□□ -0.71
USP6NL-203ENST00000443016 MAGEB6Q8N7X4 407 aa10.64□□□□□ -0.71
USP6NL-203ENST00000443016 MIGA1Q8NAN2 632 aa10.64□□□□□ -0.71
USP6NL-203ENST00000443016 PARK7Q99497 189 aaKnown RBP10.64□□□□□ -0.71
USP6NL-203ENST00000443016 CPA4Q9UI42 421 aa10.64□□□□□ -0.71
USP6NL-203ENST00000443016 HERC5Q9UII4 1024 aaKnown RBP10.64□□□□□ -0.71
USP6NL-203ENST00000443016 BRD2P25440 801 aaKnown RBP10.63□□□□□ -0.71
USP6NL-203ENST00000443016 LACTBP83111 547 aaPredicted RBP10.63□□□□□ -0.71
USP6NL-203ENST00000443016 AAMPQ13685 434 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 C20orf194Q5TEA3 1177 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 ANTXR1Q9H6X2 564 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 LAMB1P07942 1786 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 FLT1P17948 1338 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 RAB11FIP3O75154 756 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 CYP2C8P10632 490 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 USP5P45974 858 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 DYNLL1P63167 89 aaKnown RBP10.63□□□□□ -0.71
USP6NL-203ENST00000443016 MKRN4PQ13434 485 aaPredicted RBP10.63□□□□□ -0.71
USP6NL-203ENST00000443016 TTF1Q15361 905 aaPredicted RBP10.63□□□□□ -0.71
USP6NL-203ENST00000443016 SLC4A8Q2Y0W8 1093 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 CCDC84Q86UT8 332 aaPredicted RBP10.63□□□□□ -0.71
USP6NL-203ENST00000443016 CERS3Q8IU89 383 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 SIRT2Q8IXJ6 389 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 SMCR8Q8TEV9 937 aaPredicted RBP10.63□□□□□ -0.71
USP6NL-203ENST00000443016 CRBNQ96SW2 442 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 DNAJC2Q99543 621 aaKnown RBP10.63□□□□□ -0.71
USP6NL-203ENST00000443016 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.63□□□□□ -0.71
USP6NL-203ENST00000443016 PALD1Q9ULE6 856 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 AFG3L2Q9Y4W6 797 aa10.63□□□□□ -0.71
USP6NL-203ENST00000443016 DOCK2Q92608 1830 aa10.62□□□□□ -0.71
USP6NL-203ENST00000443016 A0A0G2JLL6 359 aaPredicted RBP10.62□□□□□ -0.71
USP6NL-203ENST00000443016 HLA-DOAP06340 250 aa10.62□□□□□ -0.71
USP6NL-203ENST00000443016 SLC9C1Q4G0N8 1177 aa10.62□□□□□ -0.71
USP6NL-203ENST00000443016 PRRT2Q7Z6L0 340 aaPredicted RBP10.62□□□□□ -0.71
USP6NL-203ENST00000443016 NBPF11Q86T75 865 aa10.62□□□□□ -0.71
USP6NL-203ENST00000443016 SAP30BPQ9UHR5 308 aaKnown RBP10.62□□□□□ -0.71
USP6NL-203ENST00000443016 FMNL1O95466 1100 aaPredicted RBP10.62□□□□□ -0.71
USP6NL-203ENST00000443016 CAP2P40123 477 aa10.62□□□□□ -0.71
USP6NL-203ENST00000443016 SPP2Q13103 211 aa10.62□□□□□ -0.71
USP6NL-203ENST00000443016 ARHGAP39Q9C0H5 1083 aa10.62□□□□□ -0.71
USP6NL-203ENST00000443016 GOLIM4O00461 696 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 PSMC4P43686 418 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 CAP1Q01518 475 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 MOGSQ13724 837 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 SLC9C2Q5TAH2 1124 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 C17orf99Q6UX52 265 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 FOXP4Q8IVH2 680 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms