RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 GPAT2Q6NUI2 795 aa13.56□□□□□ -0.24
NELFE-205ENST00000441998 ADGRA1Q86SQ6 560 aa13.56□□□□□ -0.24
NELFE-205ENST00000441998 NBPF11Q86T75 865 aa13.56□□□□□ -0.24
NELFE-205ENST00000441998 PROCA1Q8NCQ7 364 aaPredicted RBP13.56□□□□□ -0.24
NELFE-205ENST00000441998 ZNF280CQ8ND82 737 aa13.56□□□□□ -0.24
NELFE-205ENST00000441998 TGFBRAP1Q8WUH2 860 aa13.56□□□□□ -0.24
NELFE-205ENST00000441998 AS3MTQ9HBK9 375 aa13.56□□□□□ -0.24
NELFE-205ENST00000441998 MYH13Q9UKX3 1938 aa13.56□□□□□ -0.24
NELFE-205ENST00000441998 USP17L5A8MUK1 530 aa13.55□□□□□ -0.24
NELFE-205ENST00000441998 HLA-DOAP06340 250 aa13.55□□□□□ -0.24
NELFE-205ENST00000441998 ASNSP08243 561 aa13.55□□□□□ -0.24
NELFE-205ENST00000441998 ATP5JP18859 108 aa13.55□□□□□ -0.24
NELFE-205ENST00000441998 PABPC4Q13310 644 aaKnown RBP eCLIP13.55□□□□□ -0.245e-11■□□□□ 8.8
NELFE-205ENST00000441998 WDR18Q9BV38 432 aa13.55□□□□□ -0.24
NELFE-205ENST00000441998 EHD4Q9H223 541 aa13.55□□□□□ -0.24
NELFE-205ENST00000441998 IL1RAPL2Q9NP60 686 aa13.55□□□□□ -0.24
NELFE-205ENST00000441998 FLT1P17948 1338 aa13.55□□□□□ -0.24
NELFE-205ENST00000441998 ADGRA2Q96PE1 1338 aa13.55□□□□□ -0.24
NELFE-205ENST00000441998 BCRP11274 1271 aa13.54□□□□□ -0.24
NELFE-205ENST00000441998 SH3D19Q5HYK7 790 aa13.54□□□□□ -0.24
NELFE-205ENST00000441998 TTC6Q86TZ1 520 aa13.54□□□□□ -0.24
NELFE-205ENST00000441998 MAGEB6Q8N7X4 407 aa13.54□□□□□ -0.24
NELFE-205ENST00000441998 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
NELFE-205ENST00000441998 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
NELFE-205ENST00000441998 LRRCC1Q9C099 1032 aa13.54□□□□□ -0.24
NELFE-205ENST00000441998 PNMA3Q9UL41 463 aa13.54□□□□□ -0.24
NELFE-205ENST00000441998 AGTPBP1Q9UPW5 1226 aa13.54□□□□□ -0.24
NELFE-205ENST00000441998 MYH2Q9UKX2 1941 aa13.53□□□□□ -0.24
NELFE-205ENST00000441998 OTOFQ9HC10 1997 aa13.53□□□□□ -0.24
NELFE-205ENST00000441998 C19orf81C9J6K1 198 aa13.53□□□□□ -0.24
NELFE-205ENST00000441998 SLC9C2Q5TAH2 1124 aa13.53□□□□□ -0.24
NELFE-205ENST00000441998 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
NELFE-205ENST00000441998 ANTXR1Q9H6X2 564 aa13.53□□□□□ -0.24
NELFE-205ENST00000441998 DCTPP1Q9H773 170 aa13.53□□□□□ -0.24
NELFE-205ENST00000441998 CAPN2P17655 700 aa13.52□□□□□ -0.25
NELFE-205ENST00000441998 USP5P45974 858 aa13.52□□□□□ -0.25
NELFE-205ENST00000441998 SOX10P56693 466 aa13.52□□□□□ -0.25
NELFE-205ENST00000441998 SPP2Q13103 211 aa13.52□□□□□ -0.25
NELFE-205ENST00000441998 C20orf194Q5TEA3 1177 aa13.52□□□□□ -0.25
NELFE-205ENST00000441998 TATDN1Q6P1N9 297 aa13.52□□□□□ -0.25
NELFE-205ENST00000441998 CRACR2BQ8N4Y2 399 aaPredicted RBP13.52□□□□□ -0.25
NELFE-205ENST00000441998 HAUS7Q99871 368 aa13.52□□□□□ -0.25
NELFE-205ENST00000441998 RIOK1Q9BRS2 568 aaKnown RBP13.52□□□□□ -0.25
NELFE-205ENST00000441998 PALD1Q9ULE6 856 aa13.52□□□□□ -0.25
NELFE-205ENST00000441998 MAGEB6P1A0A0J9YX57 407 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 TRIM75PA6NK02 468 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 PDE6AP16499 860 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 PSMC4P43686 418 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 GCLCP48506 637 aaPredicted RBP13.51□□□□□ -0.25
NELFE-205ENST00000441998 FCGRTP55899 365 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 BACE1P56817 501 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 DYNLL1P63167 89 aaKnown RBP13.51□□□□□ -0.25
NELFE-205ENST00000441998 ZSCAN25Q6NSZ9 544 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 ZNF333Q96JL9 665 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 CRNKL1Q9BZJ0 848 aaKnown RBP13.51□□□□□ -0.25
NELFE-205ENST00000441998 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.51□□□□□ -0.257e-9■■■■□ 20.6
NELFE-205ENST00000441998 SRRDQ9UH36 339 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 CPA4Q9UI42 421 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 SERPINB13Q9UIV8 391 aa13.51□□□□□ -0.25
NELFE-205ENST00000441998 GOLIM4O00461 696 aa13.5□□□□□ -0.25
NELFE-205ENST00000441998 CYP2C8P10632 490 aa13.5□□□□□ -0.25
NELFE-205ENST00000441998 HOXA7P31268 230 aaPredicted RBP13.5□□□□□ -0.25
NELFE-205ENST00000441998 CAP1Q01518 475 aa13.5□□□□□ -0.25
NELFE-205ENST00000441998 AAMPQ13685 434 aa13.5□□□□□ -0.25
NELFE-205ENST00000441998 UBE3CQ15386 1083 aa13.5□□□□□ -0.25
NELFE-205ENST00000441998 SLC9C1Q4G0N8 1177 aa13.5□□□□□ -0.25
NELFE-205ENST00000441998 GADL1Q6ZQY3 521 aa13.5□□□□□ -0.25
NELFE-205ENST00000441998 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
NELFE-205ENST00000441998 SMCR8Q8TEV9 937 aaPredicted RBP13.5□□□□□ -0.25
NELFE-205ENST00000441998 DNAJC18Q9H819 358 aa13.5□□□□□ -0.25
NELFE-205ENST00000441998 PAG1Q9NWQ8 432 aa13.5□□□□□ -0.25
NELFE-205ENST00000441998 TCRBV5S4A2TA0A5A2 114 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 FAM196BA6NMK8 535 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 USP17L10C9JJH3 530 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 APBB1O00213 710 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 FMNL1O95466 1100 aaPredicted RBP13.49□□□□□ -0.25
NELFE-205ENST00000441998 SLURP2P0DP57 97 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 OSBPP22059 807 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 RRP1BQ14684 758 aaKnown RBP13.49□□□□□ -0.25
NELFE-205ENST00000441998 FAM110CQ1W6H9 321 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 GTF3C2Q8WUA4 911 aaPredicted RBP13.49□□□□□ -0.25
NELFE-205ENST00000441998 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 TRIM47Q96LD4 638 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 TMEM106CQ9BVX2 250 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 ECHDC1Q9NTX5 307 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 PTCH2Q9Y6C5 1203 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 NDUFB9Q9Y6M9 179 aa13.49□□□□□ -0.25
NELFE-205ENST00000441998 ZNF532Q9HCE3 1301 aa13.48□□□□□ -0.25
NELFE-205ENST00000441998 ADD2P35612 726 aa13.48□□□□□ -0.25
NELFE-205ENST00000441998 DNAJC2Q99543 621 aaKnown RBP13.48□□□□□ -0.25
NELFE-205ENST00000441998 ARHGAP39Q9C0H5 1083 aa13.48□□□□□ -0.25
NELFE-205ENST00000441998 BOLA2Q9H3K6 86 aa13.48□□□□□ -0.25
NELFE-205ENST00000441998 ATP8A2Q9NTI2 1148 aa13.48□□□□□ -0.25
NELFE-205ENST00000441998 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
NELFE-205ENST00000441998 ZBTB21Q9ULJ3 1066 aa13.48□□□□□ -0.25
NELFE-205ENST00000441998 USP14P54578 494 aa13.47□□□□□ -0.25
NELFE-205ENST00000441998 HMGCS2P54868 508 aa13.47□□□□□ -0.25
NELFE-205ENST00000441998 GABPAQ06546 454 aa13.47□□□□□ -0.25
NELFE-205ENST00000441998 IRF5Q13568 498 aa13.47□□□□□ -0.25
NELFE-205ENST00000441998 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms