RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 MAP3K10Q02779 954 aa15.04■□□□□ -0
SCLT1-202ENST00000439369 GABPAQ06546 454 aa15.04■□□□□ -0
SCLT1-202ENST00000439369 PDE4BQ07343 736 aa15.04■□□□□ -0
SCLT1-202ENST00000439369 C16orf86Q6ZW13 317 aa15.04■□□□□ -0
SCLT1-202ENST00000439369 SH3BP5LQ7L8J4 393 aa15.04■□□□□ -0
SCLT1-202ENST00000439369 ZFPM1Q8IX07 1006 aa15.04■□□□□ -0
SCLT1-202ENST00000439369 CSRNP1Q96S65 589 aa15.04■□□□□ -0
SCLT1-202ENST00000439369 NBPF3Q9H094 633 aa15.04■□□□□ -0
SCLT1-202ENST00000439369 SERPINB13Q9UIV8 391 aa15.04■□□□□ -0
SCLT1-202ENST00000439369 DDTLA6NHG4 134 aaPredicted RBP15.03■□□□□ -0
SCLT1-202ENST00000439369 E7EWF7 191 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 CYP2D6P10635 497 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 HAND2P61296 217 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 TRDNQ13061 729 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 EAPPQ56P03 285 aaPredicted RBP15.03■□□□□ -0
SCLT1-202ENST00000439369 MFSD6Q6ZSS7 791 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 CDC37L1Q7L3B6 337 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 KRT26Q7Z3Y9 468 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 TBC1D10CQ8IV04 446 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 RASEFQ8IZ41 740 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 TEPSINQ96N21 525 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 KRT23Q9C075 422 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 TMEM39BQ9GZU3 492 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 NMRK2Q9NPI5 230 aa15.03■□□□□ -0
SCLT1-202ENST00000439369 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.03■□□□□ -0
SCLT1-202ENST00000439369 CYP2D7A0A087X1C5 515 aa15.02■□□□□ -0
SCLT1-202ENST00000439369 SUPT20HL1Q3ZLR7 823 aa15.02■□□□□ -0
SCLT1-202ENST00000439369 DCAF15Q66K64 600 aa15.02■□□□□ -0
SCLT1-202ENST00000439369 CRACR2BQ8N4Y2 399 aaPredicted RBP15.02■□□□□ -0
SCLT1-202ENST00000439369 NCOA7Q8NI08 942 aa15.02■□□□□ -0
SCLT1-202ENST00000439369 TRIM34Q9BYJ4 488 aa15.02■□□□□ -0
SCLT1-202ENST00000439369 WDR19Q8NEZ3 1342 aa15.01□□□□□ -0.01
SCLT1-202ENST00000439369 CTDSPL2Q05D32 466 aa15.01□□□□□ -0.01
SCLT1-202ENST00000439369 RALYLQ86SE5 291 aaKnown RBP15.01□□□□□ -0.01
SCLT1-202ENST00000439369 ESR2Q92731 530 aa15.01□□□□□ -0.01
SCLT1-202ENST00000439369 CCDC17Q96LX7 622 aa15.01□□□□□ -0.01
SCLT1-202ENST00000439369 NEK1Q96PY6 1258 aa15.01□□□□□ -0.01
SCLT1-202ENST00000439369 MTA3Q9BTC8 594 aa15.01□□□□□ -0.01
SCLT1-202ENST00000439369 GPBP1L1Q9HC44 474 aaPredicted RBP15.01□□□□□ -0.01
SCLT1-202ENST00000439369 CDK8P49336 464 aa15□□□□□ -0.01
SCLT1-202ENST00000439369 RABEP1Q15276 862 aa15□□□□□ -0.01
SCLT1-202ENST00000439369 TATDN1Q6P1N9 297 aa15□□□□□ -0.01
SCLT1-202ENST00000439369 STOX1Q6ZVD7 989 aa15□□□□□ -0.01
SCLT1-202ENST00000439369 MKNK2Q9HBH9 465 aa15□□□□□ -0.01
SCLT1-202ENST00000439369 ZSWIM6Q9HCJ5 1215 aa15□□□□□ -0.01
SCLT1-202ENST00000439369 GINM1Q9NU53 330 aa15□□□□□ -0.01
SCLT1-202ENST00000439369 CLEC11AQ9Y240 323 aa15□□□□□ -0.01
SCLT1-202ENST00000439369 TAF6LQ9Y6J9 622 aa15□□□□□ -0.01
SCLT1-202ENST00000439369 SIPA1L1O43166 1804 aa15□□□□□ -0.01
SCLT1-202ENST00000439369 NF2P35240 595 aa14.99□□□□□ -0.01
SCLT1-202ENST00000439369 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
SCLT1-202ENST00000439369 ZNF526Q8TF50 670 aaPredicted RBP14.99□□□□□ -0.01
SCLT1-202ENST00000439369 DYNLL2Q96FJ2 89 aa14.99□□□□□ -0.01
SCLT1-202ENST00000439369 JAKMIP1Q96N16 626 aaKnown RBP14.99□□□□□ -0.01
SCLT1-202ENST00000439369 KIF2CQ99661 725 aa14.99□□□□□ -0.01
SCLT1-202ENST00000439369 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCLT1-202ENST00000439369 CYP46A1Q9Y6A2 500 aa14.99□□□□□ -0.01
SCLT1-202ENST00000439369 PLIN4Q96Q06 1357 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 NEDD4P46934 1319 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 RASA1P20936 1047 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 MCM5P33992 734 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 SHMT1P34896 483 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 ADCK5Q3MIX3 580 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 CCDC178Q5BJE1 867 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 PPP4R3BQ5MIZ7 849 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 NBPF12Q5TAG4 269 aaPredicted RBP14.98□□□□□ -0.01
SCLT1-202ENST00000439369 CHADLQ6NUI6 762 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 RUFY3Q7L099 469 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 DHX32Q7L7V1 743 aaKnown RBP14.98□□□□□ -0.01
SCLT1-202ENST00000439369 USP48Q86UV5 1035 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 MB21D2Q8IYB1 491 aaPredicted RBP14.98□□□□□ -0.01
SCLT1-202ENST00000439369 ZNF444Q8N0Y2 327 aaPredicted RBP14.98□□□□□ -0.01
SCLT1-202ENST00000439369 FBXL16Q8N461 479 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 DNAJC18Q9H819 358 aa14.98□□□□□ -0.01
SCLT1-202ENST00000439369 ADM5C9JUS6 153 aa14.97□□□□□ -0.01
SCLT1-202ENST00000439369 SMIM22K7EJ46 135 aa14.97□□□□□ -0.01
SCLT1-202ENST00000439369 CASTP20810 708 aaKnown RBP14.97□□□□□ -0.01
SCLT1-202ENST00000439369 RPS6KB1P23443 525 aa14.97□□□□□ -0.01
SCLT1-202ENST00000439369 EVX2Q03828 476 aa14.97□□□□□ -0.01
SCLT1-202ENST00000439369 SLC4A8Q2Y0W8 1093 aa14.97□□□□□ -0.01
SCLT1-202ENST00000439369 CDCA5Q96FF9 252 aa14.97□□□□□ -0.01
SCLT1-202ENST00000439369 ZNF341Q9BYN7 854 aa14.97□□□□□ -0.01
SCLT1-202ENST00000439369 ALDH8A1Q9H2A2 487 aaPredicted RBP14.97□□□□□ -0.01
SCLT1-202ENST00000439369 TOMM22Q9NS69 142 aa14.97□□□□□ -0.01
SCLT1-202ENST00000439369 TCP11L1Q9NUJ3 509 aa14.97□□□□□ -0.01
SCLT1-202ENST00000439369 TACC3Q9Y6A5 838 aa14.97□□□□□ -0.01
SCLT1-202ENST00000439369 SSC5DA1L4H1 1573 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 UNCXA6NJT0 531 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 B4E1Z4 1266 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 KDM4AO75164 1064 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 POTEJP0CG39 1038 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 SART3Q15020 963 aaKnown RBP14.96□□□□□ -0.01
SCLT1-202ENST00000439369 CERKLQ49MI3 558 aaPredicted RBP14.96□□□□□ -0.01
SCLT1-202ENST00000439369 IQCA1Q86XH1 822 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 CDAN1Q8IWY9 1227 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 SLC44A5Q8NCS7 719 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 NEDD1Q8NHV4 660 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 TMEM87BQ96K49 555 aa14.96□□□□□ -0.01
SCLT1-202ENST00000439369 GLIS2Q9BZE0 524 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms