RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.35■■□□□ 1.17
GTF3A-204ENST00000438571 TLR7Q9NYK1 1049 aaKnown RBP22.35■■□□□ 1.17
GTF3A-204ENST00000438571 LRP2BPQ9P2M1 347 aa22.35■■□□□ 1.17
GTF3A-204ENST00000438571 CEP290O15078 2479 aa22.34■■□□□ 1.17
GTF3A-204ENST00000438571 TBC1D12O60347 775 aa22.34■■□□□ 1.17
GTF3A-204ENST00000438571 LDHCP07864 332 aa22.34■■□□□ 1.17
GTF3A-204ENST00000438571 UQCRFS1P1P0C7P4 283 aa22.34■■□□□ 1.17
GTF3A-204ENST00000438571 GRK4P32298 578 aa22.34■■□□□ 1.17
GTF3A-204ENST00000438571 TTC39AQ5SRH9 613 aa22.34■■□□□ 1.17
GTF3A-204ENST00000438571 AATFQ9NY61 560 aaKnown RBP eCLIP22.34■■□□□ 1.17
GTF3A-204ENST00000438571 NAV1Q8NEY1 1877 aa22.34■■□□□ 1.17
GTF3A-204ENST00000438571 SURF6O75683 361 aaKnown RBP22.33■■□□□ 1.17
GTF3A-204ENST00000438571 CYP2E1P05181 493 aaPredicted RBP22.33■■□□□ 1.17
GTF3A-204ENST00000438571 FCGRTP55899 365 aa22.33■■□□□ 1.17
GTF3A-204ENST00000438571 OS9Q13438 667 aaPredicted RBP22.33■■□□□ 1.17
GTF3A-204ENST00000438571 GPR108Q9NPR9 543 aa22.33■■□□□ 1.17
GTF3A-204ENST00000438571 DDX60LQ5H9U9 1706 aaKnown RBP22.33■■□□□ 1.17
GTF3A-204ENST00000438571 HOXD10P28358 340 aa22.32■■□□□ 1.16
GTF3A-204ENST00000438571 SHROOM1Q2M3G4 852 aaPredicted RBP22.32■■□□□ 1.16
GTF3A-204ENST00000438571 ITPRIPQ8IWB1 547 aa22.32■■□□□ 1.16
GTF3A-204ENST00000438571 DBNLQ9UJU6 430 aaKnown RBP22.32■■□□□ 1.16
GTF3A-204ENST00000438571 AGTPBP1Q9UPW5 1226 aa22.32■■□□□ 1.16
GTF3A-204ENST00000438571 ZAP70P43403 619 aa22.31■■□□□ 1.16
GTF3A-204ENST00000438571 NAA16Q6N069 864 aaPredicted RBP22.31■■□□□ 1.16
GTF3A-204ENST00000438571 DNAJC18Q9H819 358 aa22.31■■□□□ 1.16
GTF3A-204ENST00000438571 PIH1D3Q9NQM4 214 aaKnown RBP22.31■■□□□ 1.16
GTF3A-204ENST00000438571 SLC45A1Q9Y2W3 748 aa22.31■■□□□ 1.16
GTF3A-204ENST00000438571 MYH8P13535 1937 aa22.3■■□□□ 1.16
GTF3A-204ENST00000438571 ZBTB7BO15156 539 aaPredicted RBP22.3■■□□□ 1.16
GTF3A-204ENST00000438571 CCL5P13501 91 aa22.3■■□□□ 1.16
GTF3A-204ENST00000438571 CAP2P40123 477 aa22.3■■□□□ 1.16
GTF3A-204ENST00000438571 JAG1P78504 1218 aa22.3■■□□□ 1.16
GTF3A-204ENST00000438571 SPP2Q13103 211 aa22.3■■□□□ 1.16
GTF3A-204ENST00000438571 HABP4Q5JVS0 413 aaKnown RBP22.3■■□□□ 1.16
GTF3A-204ENST00000438571 MAPKAPK5Q8IW41 473 aa22.3■■□□□ 1.16
GTF3A-204ENST00000438571 FTSJ3Q8IY81 847 aaKnown RBP22.3■■□□□ 1.16
GTF3A-204ENST00000438571 ANKRD13CQ8N6S4 541 aa22.3■■□□□ 1.16
GTF3A-204ENST00000438571 SMCR8Q8TEV9 937 aaPredicted RBP22.3■■□□□ 1.16
GTF3A-204ENST00000438571 CCDC8Q9H0W5 538 aaPredicted RBP22.3■■□□□ 1.16
GTF3A-204ENST00000438571 NDUFB9Q9Y6M9 179 aa22.3■■□□□ 1.16
GTF3A-204ENST00000438571 MAP4K4O95819 1239 aaPredicted RBP22.29■■□□□ 1.16
GTF3A-204ENST00000438571 HMGCS2P54868 508 aa22.29■■□□□ 1.16
GTF3A-204ENST00000438571 CCDC158Q5M9N0 1113 aa22.29■■□□□ 1.16
GTF3A-204ENST00000438571 TGFBRAP1Q8WUH2 860 aa22.29■■□□□ 1.16
GTF3A-204ENST00000438571 NOP58Q9Y2X3 529 aaKnown RBP22.29■■□□□ 1.16
GTF3A-204ENST00000438571 FLT1P17948 1338 aa22.29■■□□□ 1.16
GTF3A-204ENST00000438571 ELNP15502 786 aa22.28■■□□□ 1.16
GTF3A-204ENST00000438571 FLT3LGP49771 235 aa22.28■■□□□ 1.16
GTF3A-204ENST00000438571 DYNLL1P63167 89 aaKnown RBP22.28■■□□□ 1.16
GTF3A-204ENST00000438571 ZNF280CQ8ND82 737 aa22.28■■□□□ 1.16
GTF3A-204ENST00000438571 EAF2Q96CJ1 260 aaPredicted RBP22.28■■□□□ 1.16
GTF3A-204ENST00000438571 GCC1Q96CN9 775 aa22.28■■□□□ 1.16
GTF3A-204ENST00000438571 UNC93B1Q9H1C4 597 aa22.28■■□□□ 1.16
GTF3A-204ENST00000438571 TNPO2O14787 897 aaKnown RBP22.27■■□□□ 1.16
GTF3A-204ENST00000438571 PROCA1Q8NCQ7 364 aaPredicted RBP22.27■■□□□ 1.16
GTF3A-204ENST00000438571 NOL10Q9BSC4 688 aaKnown RBP22.27■■□□□ 1.16
GTF3A-204ENST00000438571 RNF208Q9H0X6 261 aa22.27■■□□□ 1.16
GTF3A-204ENST00000438571 BIN2Q9UBW5 565 aaPredicted RBP22.27■■□□□ 1.16
GTF3A-204ENST00000438571 MYH7P12883 1935 aa22.27■■□□□ 1.16
GTF3A-204ENST00000438571 ADCY3O60266 1144 aa22.26■■□□□ 1.15
GTF3A-204ENST00000438571 PPP4CP60510 307 aa22.26■■□□□ 1.15
GTF3A-204ENST00000438571 CEP85Q6P2H3 762 aa22.26■■□□□ 1.15
GTF3A-204ENST00000438571 SLAIN1Q8ND83 568 aa22.26■■□□□ 1.15
GTF3A-204ENST00000438571 HERC5Q9UII4 1024 aaKnown RBP22.26■■□□□ 1.15
GTF3A-204ENST00000438571 USP17L5A8MUK1 530 aa22.25■■□□□ 1.15
GTF3A-204ENST00000438571 GDF11O95390 407 aa22.25■■□□□ 1.15
GTF3A-204ENST00000438571 BAG3O95817 575 aa22.25■■□□□ 1.15
GTF3A-204ENST00000438571 GJA8P48165 433 aa22.25■■□□□ 1.15
GTF3A-204ENST00000438571 PANK1Q8TE04 598 aa22.25■■□□□ 1.15
GTF3A-204ENST00000438571 ZNF512BQ96KM6 892 aaPredicted RBP22.25■■□□□ 1.15
GTF3A-204ENST00000438571 PI4KBQ9UBF8 816 aa22.25■■□□□ 1.15
GTF3A-204ENST00000438571 SAP30BPQ9UHR5 308 aaKnown RBP22.25■■□□□ 1.15
GTF3A-204ENST00000438571 PALD1Q9ULE6 856 aa22.25■■□□□ 1.15
GTF3A-204ENST00000438571 EXOC6BQ9Y2D4 811 aa22.25■■□□□ 1.15
GTF3A-204ENST00000438571 BAZ2AQ9UIF9 1905 aaKnown RBP22.25■■□□□ 1.15
GTF3A-204ENST00000438571 TRIOBPQ9H2D6 2365 aa22.25■■□□□ 1.15
GTF3A-204ENST00000438571 FRMPD3Q5JV73 1810 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 H0YGN5 161 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 PEX10O60683 326 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 INHAP05111 366 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 GJB1P08034 283 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 UBXN2AP68543 259 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 FAM110CQ1W6H9 321 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 UBE2Q1Q7Z7E8 422 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 ANTXR1Q9H6X2 564 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 PNMA3Q9UL41 463 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 TAOK2Q9UL54 1235 aa22.24■■□□□ 1.15
GTF3A-204ENST00000438571 COLQQ9Y215 455 aaPredicted RBP22.24■■□□□ 1.15
GTF3A-204ENST00000438571 MTMR2Q13614 643 aa22.23■■□□□ 1.15
GTF3A-204ENST00000438571 SH3D19Q5HYK7 790 aa22.23■■□□□ 1.15
GTF3A-204ENST00000438571 ASCC2Q9H1I8 757 aaPredicted RBP22.23■■□□□ 1.15
GTF3A-204ENST00000438571 CYP7A1P22680 504 aa22.22■■□□□ 1.15
GTF3A-204ENST00000438571 MIGA1Q8NAN2 632 aa22.22■■□□□ 1.15
GTF3A-204ENST00000438571 U2AF1L4Q8WU68 220 aaKnown RBP22.22■■□□□ 1.15
GTF3A-204ENST00000438571 DHX36Q9H2U1 1008 aaKnown RBP22.22■■□□□ 1.15
GTF3A-204ENST00000438571 PCDH10Q9P2E7 1040 aa22.22■■□□□ 1.15
GTF3A-204ENST00000438571 IDH1O75874 414 aaKnown RBP22.21■■□□□ 1.15
GTF3A-204ENST00000438571 PLCG2P16885 1265 aa22.21■■□□□ 1.15
GTF3A-204ENST00000438571 IRF5Q13568 498 aa22.21■■□□□ 1.15
GTF3A-204ENST00000438571 DIEXFQ68CQ4 756 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms