RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CHRNDQ07001 517 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 PDE4BQ07343 736 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 GOLGA8FQ08AF8 430 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 GOLGA8DPQ0D2H9 430 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 TRIM29Q14134 588 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 PTPN14Q15678 1187 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 DIS3L2Q8IYB7 885 aaKnown RBP11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 OXER1Q8TDS5 423 aa11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 NIP7Q9Y221 180 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLSTN1-203ENST00000435891 DOCK2Q92608 1830 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 IFNAR1P17181 557 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 SMIM5Q71RC9 77 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 NOSTRINQ8IVI9 506 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 LRP2BPQ9P2M1 347 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 PCDHA5Q9Y5H7 936 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 MYH14Q7Z406 1995 aaKnown RBP11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 CHD4Q14839 1912 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 ARAP2Q8WZ64 1704 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 NTSR2O95665 410 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 NUP133Q8WUM0 1156 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 ABCF2Q9UG63 623 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 KCNH3Q9ULD8 1083 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 PAXBP1Q9Y5B6 917 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 DOT1LQ8TEK3 1739 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 CYP2D7A0A087X1C5 515 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 FAM237AA0A1B0GTK4 181 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 MMP1P03956 469 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 ATP2B1P20020 1258 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 GYG1P46976 350 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 EVX2Q03828 476 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 STAG1Q8WVM7 1258 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 PCDHB6Q9Y5E3 794 aa11.98□□□□□ -0.49
CLSTN1-203ENST00000435891 hCG_1642624A0A1W2PR95 340 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 MINDY4BA8MYZ0 360 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 WTAPQ15007 396 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 RTN1Q16799 776 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 USP49Q70CQ1 688 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 GRAMD1CQ8IYS0 662 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 SECISBP2LQ93073 1101 aaKnown RBP11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 ZNF215Q9UL58 517 aaPredicted RBP11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 LOC102724428A0A0B4J2F2 783 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 FAM205CA6NFA0 338 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 TMEM232C9JQI7 657 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 SIK1P57059 783 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 GSDMDP57764 484 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 KRBA2Q6ZNG9 492 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 DHX37Q8IY37 1157 aaKnown RBP11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 JMYQ8N9B5 988 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 KRT23Q9C075 422 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 STK36Q9NRP7 1315 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 CYP7A1P22680 504 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 KCNQ4P56696 695 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 ZNF827Q17R98 1081 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 CCDC152Q4G0S7 254 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 CNNM3Q8NE01 707 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 CNNM2Q9H8M5 875 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 IMPACTQ9P2X3 320 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 TAF1P21675 1872 aa11.97□□□□□ -0.49
CLSTN1-203ENST00000435891 PNPLA7Q6ZV29 1317 aa11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 IKBKBO14920 756 aa11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 CUTAO60888 179 aa11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 ADAMTS2O95450 1211 aa11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 PRR29P0C7W0 189 aa11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 IGHMBP2P38935 993 aaKnown RBP11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 CRACR2BQ8N4Y2 399 aaPredicted RBP11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 FANCLQ9NW38 375 aa11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 MDM2Q00987 491 aaPredicted RBP11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 PPARAQ07869 468 aa11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 ZNF654Q8IZM8 581 aa11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 MARCH10Q8NA82 808 aaPredicted RBP11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 AK7Q96M32 723 aa11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 FBXO2Q9UK22 296 aaPredicted RBP11.96□□□□□ -0.49
CLSTN1-203ENST00000435891 COL1A1P02452 1464 aaPredicted RBP11.96□□□□□ -0.5
CLSTN1-203ENST00000435891 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.5
CLSTN1-203ENST00000435891 PRDM1O75626 825 aa11.96□□□□□ -0.5
CLSTN1-203ENST00000435891 SFPQP23246 707 aaKnown RBP eCLIP11.96□□□□□ -0.5
CLSTN1-203ENST00000435891 PDILTQ8N807 584 aa11.96□□□□□ -0.5
CLSTN1-203ENST00000435891 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.5
CLSTN1-203ENST00000435891 RGS22Q8NE09 1264 aa11.96□□□□□ -0.5
CLSTN1-203ENST00000435891 PPP1R13BQ96KQ4 1090 aa11.96□□□□□ -0.5
CLSTN1-203ENST00000435891 BCL9LQ86UU0 1499 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 TIAM2Q8IVF5 1701 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 NPHP1O15259 732 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 KCNQ2O43526 872 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 DYNLL1P63167 89 aaKnown RBP11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 MYL5Q02045 173 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 EARS2Q5JPH6 523 aaKnown RBP11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 FANCBQ8NB91 859 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 ZNF384Q8TF68 577 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 NACAP1Q9BZK3 213 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 INTS13Q9NVM9 706 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 POLR2DO15514 142 aaKnown RBP11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 UBASH3AP57075 661 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 OGFRQ9NZT2 677 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 COL16A1Q07092 1604 aaPredicted RBP11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 BCORQ6W2J9 1755 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 WNT7AO00755 349 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 DDB1Q16531 1140 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms