RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 ZNF213O14771 459 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 STX10O60499 249 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 CUTAO60888 179 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 PPFIA4O75335 1185 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 SASH1O94885 1247 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 SLC5A1P13866 664 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 RXRAP19793 462 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 VSNL1P62760 191 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 DCAF8Q5TAQ9 597 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 SLC35F6Q8N357 371 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 NUP88Q99567 741 aaPredicted RBP8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 RTEL1Q9NZ71 1219 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 HEG1Q9ULI3 1381 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 UBAP1LF5GYI3 381 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 ZEB2O60315 1214 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 TFRCP02786 760 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 ATP5JP18859 108 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 MATR3P43243 847 aaKnown RBP eCLIP8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 KCNJ6P48051 423 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 IGSF22Q8N9C0 903 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 HELBQ8NG08 1087 aaPredicted RBP8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 FBXO41Q8TF61 875 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 PCMTD1Q96MG8 357 aaPredicted RBP8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 CLIC6Q96NY7 704 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 CDC5LQ99459 802 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 SAMM50Q9Y512 469 aa8.4□□□□□ -1.06
SYNPO2-203ENST00000434046 A0A1W2PQ27 194 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 A0A1W2PQ64 194 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 A0A1W2PQD8 194 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 IKBKBO14920 756 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 CDR1P51861 262 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 CORO7P57737 925 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 MAP3K12Q12852 859 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 STIM1Q13586 685 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 FBXW10Q5XX13 1052 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 CCDC82Q8N4S0 544 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 OTUD6BQ8N6M0 293 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 BCAS4Q8TDM0 211 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 FAM212AQ96EL1 285 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 PNKPQ96T60 521 aa8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 NAPGQ99747 312 aaPredicted RBP8.4□□□□□ -1.07
SYNPO2-203ENST00000434046 LTBP4Q8N2S1 1624 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 PLEKHG2Q9H7P9 1386 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 GOLGA6CA6NDK9 693 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 PATL2C9JE40 543 aaKnown RBP8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 ZFYP08048 801 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 GOLGA6DP0CG33 693 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 SAFBQ15424 915 aaKnown RBP eCLIP8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 EPHA10Q5JZY3 1008 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 LRRC31Q6UY01 552 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 KBTBD3Q8NAB2 608 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 RIN2Q8WYP3 895 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 C8orf37Q96NL8 207 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 CXorf56Q9H5V9 222 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 GPHNQ9NQX3 736 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 GOLGA6AQ9NYA3 693 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 NIP7Q9Y221 180 aaKnown RBP eCLIP8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 PCDHA5Q9Y5H7 936 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 CAPN7Q9Y6W3 813 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 YEATS4O95619 227 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 CEP57Q86XR8 500 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 JPH2Q9BR39 696 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 ALG1Q9BT22 464 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 NAPBQ9H115 298 aa8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 MRPL44Q9H9J2 332 aaKnown RBP8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 DBNLQ9UJU6 430 aaKnown RBP8.39□□□□□ -1.07
SYNPO2-203ENST00000434046 ITGA6P23229 1130 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 PDIA3P30101 505 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 ADD1P35611 737 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 AFMP43652 599 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 TTF1Q15361 905 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 NCAPH2Q6IBW4 605 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 KIAA1328Q86T90 577 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 MED4Q9NPJ6 270 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 RNF113AO15541 343 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 ZPR1O75312 459 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 SSBP05455 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 CCT6AP40227 531 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 PTPN12Q05209 780 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 BEND6Q5SZJ8 279 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 SLC9C2Q5TAH2 1124 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 RSRC2Q7L4I2 434 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 SLF1Q9BQI6 1058 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 KCNH3Q9ULD8 1083 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 CARMIL3Q8ND23 1372 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 NDUFAB1O14561 156 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 ENC1O14682 589 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 CMA1P23946 247 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 CCDC152Q4G0S7 254 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 LRRC24Q50LG9 513 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 BRAPQ7Z569 592 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 MICU3Q86XE3 530 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 AMOTL1Q8IY63 956 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 ACRBPQ8NEB7 543 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 CTCFLQ8NI51 663 aaPredicted RBP8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 KCND1Q9NSA2 647 aa8.38□□□□□ -1.07
SYNPO2-203ENST00000434046 E7EWF7 191 aa8.37□□□□□ -1.07
SYNPO2-203ENST00000434046 N4BP3O15049 544 aa8.37□□□□□ -1.07
SYNPO2-203ENST00000434046 ATP2C2O75185 946 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms