RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 BTBD19C9JJ37 291 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 ADD2P35612 726 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 CRHR2Q13324 411 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 TAF1CQ15572 869 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-207ENST00000430858 ZSCAN25Q6NSZ9 544 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 CTU1Q7Z7A3 348 aaKnown RBP11.88□□□□□ -0.51
HDAC6-207ENST00000430858 METTL16Q86W50 562 aaKnown RBP11.88□□□□□ -0.51
HDAC6-207ENST00000430858 FAM43AQ8N2R8 423 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 GCC1Q96CN9 775 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 ABHD8Q96I13 439 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 TRIM34Q9BYJ4 488 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 MCOLN1Q9GZU1 580 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 ZFYVE28Q9HCC9 887 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-207ENST00000430858 PALD1Q9ULE6 856 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 ZHX2Q9Y6X8 837 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 DOCK2Q92608 1830 aa11.88□□□□□ -0.51
HDAC6-207ENST00000430858 TTC41PQ6P2S7 1318 aa11.87□□□□□ -0.51
HDAC6-207ENST00000430858 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
HDAC6-207ENST00000430858 FAM196BA6NMK8 535 aa11.87□□□□□ -0.51
HDAC6-207ENST00000430858 CAP2P40123 477 aa11.87□□□□□ -0.51
HDAC6-207ENST00000430858 UBE3CQ15386 1083 aa11.87□□□□□ -0.51
HDAC6-207ENST00000430858 PKN2Q16513 984 aaKnown RBP11.87□□□□□ -0.51
HDAC6-207ENST00000430858 ANKRD23Q86SG2 305 aa11.87□□□□□ -0.51
HDAC6-207ENST00000430858 TTC6Q86TZ1 520 aa11.87□□□□□ -0.51
HDAC6-207ENST00000430858 CRACR2BQ8N4Y2 399 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-207ENST00000430858 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
HDAC6-207ENST00000430858 CRNKL1Q9BZJ0 848 aaKnown RBP11.87□□□□□ -0.51
HDAC6-207ENST00000430858 SAP30BPQ9UHR5 308 aaKnown RBP11.87□□□□□ -0.51
HDAC6-207ENST00000430858 AFG3L2Q9Y4W6 797 aa11.87□□□□□ -0.51
HDAC6-207ENST00000430858 SUPT16HQ9Y5B9 1047 aaKnown RBP11.87□□□□□ -0.51
HDAC6-207ENST00000430858 ERC2O15083 957 aa11.86□□□□□ -0.51
HDAC6-207ENST00000430858 FASTKD5Q7L8L6 764 aaKnown RBP11.86□□□□□ -0.51
HDAC6-207ENST00000430858 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
HDAC6-207ENST00000430858 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
HDAC6-207ENST00000430858 A0A0G2JLL6 359 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-207ENST00000430858 TLR2O60603 784 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 CAPN15O75808 1086 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 GLRX3O76003 335 aaKnown RBP11.85□□□□□ -0.51
HDAC6-207ENST00000430858 ASNSP08243 561 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 SP3Q02447 781 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 MOGSQ13724 837 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 ANKRD45Q5TZF3 282 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 TSHZ3Q63HK5 1081 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 PRRT2Q7Z6L0 340 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-207ENST00000430858 LCORLQ8N3X6 602 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 KBTBD3Q8NAB2 608 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 ERO1AQ96HE7 468 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 EHD4Q9H223 541 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 RWDD1Q9H446 243 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-207ENST00000430858 DNAJC18Q9H819 358 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 SERPINB13Q9UIV8 391 aa11.85□□□□□ -0.51
HDAC6-207ENST00000430858 TRIM75PA6NK02 468 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 USP17L5A8MUK1 530 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 PDHXO00330 501 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 MBD4O95243 580 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 POLR3DP05423 398 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-207ENST00000430858 MX1P20591 662 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 RRP1BQ14684 758 aaKnown RBP11.84□□□□□ -0.51
HDAC6-207ENST00000430858 LRRFIP1Q32MZ4 808 aaKnown RBP11.84□□□□□ -0.51
HDAC6-207ENST00000430858 ZNF280CQ8ND82 737 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 EXOC6Q8TAG9 804 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 ARMT1Q9H993 441 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 AS3MTQ9HBK9 375 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 DCP1AQ9NPI6 582 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-207ENST00000430858 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 SLC45A1Q9Y2W3 748 aa11.84□□□□□ -0.51
HDAC6-207ENST00000430858 ZFYP08048 801 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-207ENST00000430858 SPP2Q13103 211 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 ARHGEF6Q15052 776 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 SLC4A8Q2Y0W8 1093 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 SLFNL1Q499Z3 407 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 GPAT2Q6NUI2 795 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 TATDN1Q6P1N9 297 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 CCDC84Q86UT8 332 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-207ENST00000430858 PI4K2BQ8TCG2 481 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 OTUD7AQ8TE49 926 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-207ENST00000430858 SDR42E1Q8WUS8 393 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 PARK7Q99497 189 aaKnown RBP11.83□□□□□ -0.52
HDAC6-207ENST00000430858 ATP8A2Q9NTI2 1148 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-207ENST00000430858 TAOK2Q9UL54 1235 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
HDAC6-207ENST00000430858 CCDC85CA6NKD9 419 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 CHGBP05060 677 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 PLCD1P51178 756 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 FBXO46Q6PJ61 603 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-207ENST00000430858 GADL1Q6ZQY3 521 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 SMC5Q8IY18 1101 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 PROCA1Q8NCQ7 364 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-207ENST00000430858 CD99L2Q8TCZ2 262 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 APPBP2Q92624 585 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 DDRGK1Q96HY6 314 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 WDR18Q9BV38 432 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 PUS7LQ9H0K6 701 aaKnown RBP11.82□□□□□ -0.52
HDAC6-207ENST00000430858 ZBTB21Q9ULJ3 1066 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 AGTPBP1Q9UPW5 1226 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 TRIM17Q9Y577 477 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 DOCK1Q14185 1865 aa11.82□□□□□ -0.52
HDAC6-207ENST00000430858 SALL3Q9BXA9 1300 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms