RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 USP17L8P0C7I0 530 aa16.85■□□□□ 0.29
CDK3-201ENST00000425876 KIAA2012Q0VF49 1180 aa16.85■□□□□ 0.29
CDK3-201ENST00000425876 TEX11Q8IYF3 940 aa16.85■□□□□ 0.29
CDK3-201ENST00000425876 TGFBRAP1Q8WUH2 860 aa16.85■□□□□ 0.29
CDK3-201ENST00000425876 CHAMP1Q96JM3 812 aa16.85■□□□□ 0.29
CDK3-201ENST00000425876 DAGLAQ9Y4D2 1042 aa16.85■□□□□ 0.29
CDK3-201ENST00000425876 GOLGA8AA7E2F4 631 aa16.85■□□□□ 0.29
CDK3-201ENST00000425876 RANBP6O60518 1105 aaKnown RBP16.85■□□□□ 0.29
CDK3-201ENST00000425876 HHIPL2Q6UWX4 724 aa16.85■□□□□ 0.29
CDK3-201ENST00000425876 ZSCAN10Q96SZ4 725 aaPredicted RBP16.85■□□□□ 0.29
CDK3-201ENST00000425876 SYT17Q9BSW7 474 aa16.85■□□□□ 0.29
CDK3-201ENST00000425876 ORC3Q9UBD5 711 aaPredicted RBP16.85■□□□□ 0.29
CDK3-201ENST00000425876 KIF13BQ9NQT8 1826 aa16.84■□□□□ 0.29
CDK3-201ENST00000425876 TNKSO95271 1327 aa16.84■□□□□ 0.29
CDK3-201ENST00000425876 CYP2D6P10635 497 aa16.84■□□□□ 0.29
CDK3-201ENST00000425876 ADD1P35611 737 aaKnown RBP16.84■□□□□ 0.29
CDK3-201ENST00000425876 HDLBPQ00341 1268 aaKnown RBP16.84■□□□□ 0.29
CDK3-201ENST00000425876 CCDC93Q567U6 631 aa16.84■□□□□ 0.29
CDK3-201ENST00000425876 MICU3Q86XE3 530 aa16.84■□□□□ 0.29
CDK3-201ENST00000425876 RTKN2Q8IZC4 609 aa16.84■□□□□ 0.29
CDK3-201ENST00000425876 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
CDK3-201ENST00000425876 FAM217BQ9NTX9 383 aaPredicted RBP16.84■□□□□ 0.29
CDK3-201ENST00000425876 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
CDK3-201ENST00000425876 CCDC196A0A1B0GTZ2 297 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 ECE2O60344 883 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 KCNA3P22001 575 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 CDC27P30260 824 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 RESTQ13127 1097 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 NTRK3Q16288 839 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 USP48Q86UV5 1035 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 ENAHQ8N8S7 591 aaPredicted RBP16.83■□□□□ 0.28
CDK3-201ENST00000425876 NLGN2Q8NFZ4 835 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 FBXW7Q969H0 707 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 PSMD1Q99460 953 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 ZKSCAN3Q9BRR0 538 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 DBNDD1Q9H9R9 158 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 ZNF287Q9HBT7 754 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 CNPY2Q9Y2B0 182 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 NAV1Q8NEY1 1877 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 STK36Q9NRP7 1315 aa16.83■□□□□ 0.28
CDK3-201ENST00000425876 IFNAR1P17181 557 aa16.82■□□□□ 0.28
CDK3-201ENST00000425876 TGFB2P61812 414 aa16.82■□□□□ 0.28
CDK3-201ENST00000425876 KRT85P78386 507 aa16.82■□□□□ 0.28
CDK3-201ENST00000425876 DNM1Q05193 864 aaKnown RBP16.82■□□□□ 0.28
CDK3-201ENST00000425876 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
CDK3-201ENST00000425876 CCDC178Q5BJE1 867 aa16.82■□□□□ 0.28
CDK3-201ENST00000425876 DACT2Q5SW24 774 aa16.82■□□□□ 0.28
CDK3-201ENST00000425876 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
CDK3-201ENST00000425876 MAPKAPK5Q8IW41 473 aa16.82■□□□□ 0.28
CDK3-201ENST00000425876 ZNF654Q8IZM8 581 aa16.82■□□□□ 0.28
CDK3-201ENST00000425876 VPS33BQ9H267 617 aa16.82■□□□□ 0.28
CDK3-201ENST00000425876 FLT1P17948 1338 aa16.82■□□□□ 0.28
CDK3-201ENST00000425876 UTRNP46939 3433 aa16.82■□□□□ 0.28
CDK3-201ENST00000425876 USP17L3A6NCW0 530 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 USP17L4A6NCW7 530 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 C21orf2O43822 256 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 PRDM1O75626 825 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 POLR3DP05423 398 aaPredicted RBP16.81■□□□□ 0.28
CDK3-201ENST00000425876 DPEP1P16444 411 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 NCLP19338 710 aaKnown RBP16.81■□□□□ 0.28
CDK3-201ENST00000425876 DEKP35659 375 aaKnown RBP16.81■□□□□ 0.28
CDK3-201ENST00000425876 RTN1Q16799 776 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 IFIT1BQ5T764 474 aaKnown RBP16.81■□□□□ 0.28
CDK3-201ENST00000425876 SOGA3Q5TF21 947 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 USP17L1Q7RTZ2 530 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 FERMT3Q86UX7 667 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 RAB11FIP4Q86YS3 637 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 FBXO18Q8NFZ0 1043 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 GPT2Q8TD30 523 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 TEKT1Q969V4 418 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
CDK3-201ENST00000425876 DDX60LQ5H9U9 1706 aaKnown RBP16.81■□□□□ 0.28
CDK3-201ENST00000425876 CDK5RAP2Q96SN8 1893 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 TCHHQ07283 1943 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 CALM1P0DP23 149 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 CALM2P0DP24 149 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 CALM3P0DP25 149 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 EVX2Q03828 476 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 ATL3Q6DD88 541 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 FANCBQ8NB91 859 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 C8orf76Q96K31 380 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 SCAND2PQ9GZW5 306 aaPredicted RBP16.81■□□□□ 0.28
CDK3-201ENST00000425876 TCP11L1Q9NUJ3 509 aa16.81■□□□□ 0.28
CDK3-201ENST00000425876 ELP1O95163 1332 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 TSPY2A6NKD2 308 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 DDAH1O94760 285 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 RXRAP19793 462 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 IARSP41252 1262 aaKnown RBP16.8■□□□□ 0.28
CDK3-201ENST00000425876 UBE2HP62256 183 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 AOC3Q16853 763 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 C16orf86Q6ZW13 317 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 CATIPQ7Z7H3 387 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 ANKS1AQ92625 1134 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 ZDHHC15Q96MV8 337 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 MYL10Q9BUA6 226 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 GZF1Q9H116 711 aaPredicted RBP16.8■□□□□ 0.28
CDK3-201ENST00000425876 GDPD2Q9HCC8 539 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 ISY1Q9ULR0 285 aaKnown RBP16.8■□□□□ 0.28
CDK3-201ENST00000425876 FOCADQ5VW36 1801 aa16.8■□□□□ 0.28
CDK3-201ENST00000425876 F8W031 263 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms