RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 EFCC1Q9HA90 598 aa13.53□□□□□ -0.24
SSBP3-206ENST00000420121 AATFQ9NY61 560 aaKnown RBP eCLIP13.53□□□□□ -0.24
SSBP3-206ENST00000420121 DDX19BQ9UMR2 479 aa13.53□□□□□ -0.24
SSBP3-206ENST00000420121 AFG3L2Q9Y4W6 797 aa13.53□□□□□ -0.24
SSBP3-206ENST00000420121 NDUFB9Q9Y6M9 179 aa13.53□□□□□ -0.24
SSBP3-206ENST00000420121 A0A0G2JLL6 359 aaPredicted RBP13.52□□□□□ -0.25
SSBP3-206ENST00000420121 PDHXO00330 501 aa13.52□□□□□ -0.25
SSBP3-206ENST00000420121 CTNND1O60716 968 aaKnown RBP13.52□□□□□ -0.25
SSBP3-206ENST00000420121 CTGFP29279 349 aa13.52□□□□□ -0.25
SSBP3-206ENST00000420121 PRRT2Q7Z6L0 340 aaPredicted RBP13.52□□□□□ -0.25
SSBP3-206ENST00000420121 CCDC84Q86UT8 332 aaPredicted RBP13.52□□□□□ -0.25
SSBP3-206ENST00000420121 RPAP2Q8IXW5 612 aaPredicted RBP13.52□□□□□ -0.25
SSBP3-206ENST00000420121 TEX11Q8IYF3 940 aa13.52□□□□□ -0.25
SSBP3-206ENST00000420121 RHPN1Q8TCX5 695 aa13.52□□□□□ -0.25
SSBP3-206ENST00000420121 ANTXR1Q9H6X2 564 aa13.52□□□□□ -0.25
SSBP3-206ENST00000420121 IL1RAPL2Q9NP60 686 aa13.52□□□□□ -0.25
SSBP3-206ENST00000420121 ZHX2Q9Y6X8 837 aa13.52□□□□□ -0.25
SSBP3-206ENST00000420121 MYH7P12883 1935 aa13.51□□□□□ -0.25
SSBP3-206ENST00000420121 ABCB7O75027 752 aa13.51□□□□□ -0.25
SSBP3-206ENST00000420121 IGSF3O75054 1194 aa13.51□□□□□ -0.25
SSBP3-206ENST00000420121 LACTBP83111 547 aaPredicted RBP13.51□□□□□ -0.25
SSBP3-206ENST00000420121 AACSQ86V21 672 aa13.51□□□□□ -0.25
SSBP3-206ENST00000420121 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
SSBP3-206ENST00000420121 DNAJC18Q9H819 358 aa13.51□□□□□ -0.25
SSBP3-206ENST00000420121 NAV1Q8NEY1 1877 aa13.5□□□□□ -0.25
SSBP3-206ENST00000420121 MKI67P46013 3256 aaKnown RBP13.5□□□□□ -0.25
SSBP3-206ENST00000420121 FLT1P17948 1338 aa13.5□□□□□ -0.25
SSBP3-206ENST00000420121 DYNLL1P63167 89 aaKnown RBP13.5□□□□□ -0.25
SSBP3-206ENST00000420121 METTL16Q86W50 562 aaKnown RBP13.5□□□□□ -0.25
SSBP3-206ENST00000420121 ARMC5Q96C12 935 aa13.5□□□□□ -0.25
SSBP3-206ENST00000420121 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.5□□□□□ -0.25
SSBP3-206ENST00000420121 PICK1Q9NRD5 415 aa13.5□□□□□ -0.25
SSBP3-206ENST00000420121 CPA4Q9UI42 421 aa13.5□□□□□ -0.25
SSBP3-206ENST00000420121 DOCK3Q8IZD9 2030 aa13.5□□□□□ -0.25
SSBP3-206ENST00000420121 BAG3O95817 575 aa13.49□□□□□ -0.25
SSBP3-206ENST00000420121 CYP2C8P10632 490 aa13.49□□□□□ -0.25
SSBP3-206ENST00000420121 BCRP11274 1271 aa13.49□□□□□ -0.25
SSBP3-206ENST00000420121 CYP7A1P22680 504 aa13.49□□□□□ -0.25
SSBP3-206ENST00000420121 CAP2P40123 477 aa13.49□□□□□ -0.25
SSBP3-206ENST00000420121 JAG1P78504 1218 aa13.49□□□□□ -0.25
SSBP3-206ENST00000420121 MAPKAPK5Q8IW41 473 aa13.49□□□□□ -0.25
SSBP3-206ENST00000420121 TGFBRAP1Q8WUH2 860 aa13.49□□□□□ -0.25
SSBP3-206ENST00000420121 PTCH2Q9Y6C5 1203 aa13.49□□□□□ -0.25
SSBP3-206ENST00000420121 POTEFA5A3E0 1075 aa13.48□□□□□ -0.25
SSBP3-206ENST00000420121 IDH1O75874 414 aaKnown RBP13.48□□□□□ -0.25
SSBP3-206ENST00000420121 PLCG2P16885 1265 aa13.48□□□□□ -0.25
SSBP3-206ENST00000420121 PDE3AQ14432 1141 aa13.48□□□□□ -0.25
SSBP3-206ENST00000420121 SHROOM1Q2M3G4 852 aaPredicted RBP13.48□□□□□ -0.25
SSBP3-206ENST00000420121 HSP90AB4PQ58FF6 505 aa13.48□□□□□ -0.25
SSBP3-206ENST00000420121 KIF1BPQ96EK5 621 aa13.48□□□□□ -0.25
SSBP3-206ENST00000420121 NOL10Q9BSC4 688 aaKnown RBP13.48□□□□□ -0.25
SSBP3-206ENST00000420121 PI4KBQ9UBF8 816 aa13.48□□□□□ -0.25
SSBP3-206ENST00000420121 HERC5Q9UII4 1024 aaKnown RBP13.48□□□□□ -0.25
SSBP3-206ENST00000420121 TRIM75PA6NK02 468 aa13.47□□□□□ -0.25
SSBP3-206ENST00000420121 FASTKD5Q7L8L6 764 aaKnown RBP13.47□□□□□ -0.25
SSBP3-206ENST00000420121 MAGEB6Q8N7X4 407 aa13.47□□□□□ -0.25
SSBP3-206ENST00000420121 MIGA1Q8NAN2 632 aa13.47□□□□□ -0.25
SSBP3-206ENST00000420121 ZNF333Q96JL9 665 aa13.47□□□□□ -0.25
SSBP3-206ENST00000420121 TRIM47Q96LD4 638 aa13.47□□□□□ -0.25
SSBP3-206ENST00000420121 DHX36Q9H2U1 1008 aaKnown RBP13.47□□□□□ -0.25
SSBP3-206ENST00000420121 PALD1Q9ULE6 856 aa13.47□□□□□ -0.25
SSBP3-206ENST00000420121 SLC45A1Q9Y2W3 748 aa13.47□□□□□ -0.25
SSBP3-206ENST00000420121 APBB1O00213 710 aa13.46□□□□□ -0.25
SSBP3-206ENST00000420121 HMMRO75330 724 aa13.46□□□□□ -0.25
SSBP3-206ENST00000420121 TREML2Q5T2D2 321 aa13.46□□□□□ -0.25
SSBP3-206ENST00000420121 GADL1Q6ZQY3 521 aa13.46□□□□□ -0.25
SSBP3-206ENST00000420121 CLASRPQ8N2M8 674 aaKnown RBP13.46□□□□□ -0.25
SSBP3-206ENST00000420121 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.46□□□□□ -0.25
SSBP3-206ENST00000420121 PARK7Q99497 189 aaKnown RBP13.46□□□□□ -0.25
SSBP3-206ENST00000420121 RIOK1Q9BRS2 568 aaKnown RBP13.46□□□□□ -0.25
SSBP3-206ENST00000420121 BAZ2AQ9UIF9 1905 aaKnown RBP13.45□□□□□ -0.26
SSBP3-206ENST00000420121 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
SSBP3-206ENST00000420121 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
SSBP3-206ENST00000420121 GNRH1P01148 92 aa13.45□□□□□ -0.26
SSBP3-206ENST00000420121 SPP2Q13103 211 aa13.45□□□□□ -0.26
SSBP3-206ENST00000420121 ARHGEF6Q15052 776 aa13.45□□□□□ -0.26
SSBP3-206ENST00000420121 ZNF280CQ8ND82 737 aa13.45□□□□□ -0.26
SSBP3-206ENST00000420121 EDC3Q96F86 508 aaKnown RBP13.45□□□□□ -0.26
SSBP3-206ENST00000420121 SAP30BPQ9UHR5 308 aaKnown RBP13.45□□□□□ -0.26
SSBP3-206ENST00000420121 AGTPBP1Q9UPW5 1226 aa13.45□□□□□ -0.26
SSBP3-206ENST00000420121 PLXNB2O15031 1838 aa13.45□□□□□ -0.26
SSBP3-206ENST00000420121 TCRBV5S4A2TA0A5A2 114 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 USP17L5A8MUK1 530 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 PDE6AP16499 860 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 OSBPP22059 807 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 PSMC4P43686 418 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 MAP3K12Q12852 859 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 KIF22Q14807 665 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 SLC4A8Q2Y0W8 1093 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 SH3D19Q5HYK7 790 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
SSBP3-206ENST00000420121 FOXP4Q8IVH2 680 aaPredicted RBP13.44□□□□□ -0.26
SSBP3-206ENST00000420121 PROCA1Q8NCQ7 364 aaPredicted RBP13.44□□□□□ -0.26
SSBP3-206ENST00000420121 SRRDQ9UH36 339 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 MYH8P13535 1937 aa13.44□□□□□ -0.26
SSBP3-206ENST00000420121 IFIT2P09913 472 aaKnown RBP13.43□□□□□ -0.26
SSBP3-206ENST00000420121 HMGCS2P54868 508 aa13.43□□□□□ -0.26
SSBP3-206ENST00000420121 PRMT2P55345 433 aa13.43□□□□□ -0.26
SSBP3-206ENST00000420121 SLC9C1Q4G0N8 1177 aa13.43□□□□□ -0.26
SSBP3-206ENST00000420121 CERS3Q8IU89 383 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms