RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 MCM2P49736 904 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 NEK4P51957 841 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 SKOR2Q2VWA4 1001 aaPredicted RBP11.78□□□□□ -0.52
DDB1-202ENST00000414411 ANGEL2Q5VTE6 544 aaKnown RBP11.78□□□□□ -0.52
DDB1-202ENST00000414411 CTR9Q6PD62 1173 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 NACAP1Q9BZK3 213 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 NMRK2Q9NPI5 230 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 PITPNM2Q9BZ72 1349 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 TCP10L2B9ZVM9 353 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 SBK1Q52WX2 424 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 FAM151AQ8WW52 585 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 OSBPL5Q9H0X9 879 aaPredicted RBP11.78□□□□□ -0.52
DDB1-202ENST00000414411 VEZTQ9HBM0 779 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 TMOD2Q9NZR1 351 aa11.78□□□□□ -0.52
DDB1-202ENST00000414411 RBM8AQ9Y5S9 174 aaKnown RBP11.78□□□□□ -0.52
DDB1-202ENST00000414411 USP17L12C9JPN9 530 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 USP17L21D6R901 530 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 BAG4O95429 457 aaKnown RBP11.77□□□□□ -0.53
DDB1-202ENST00000414411 HSPA4P34932 840 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 TCP10Q12799 353 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 PICALMQ13492 652 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 KCNB2Q92953 911 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 NAPBQ9H115 298 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 MCM9Q9NXL9 1143 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 GGA3Q9NZ52 723 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 DDX60LQ5H9U9 1706 aaKnown RBP11.77□□□□□ -0.53
DDB1-202ENST00000414411 ATRNL1Q5VV63 1379 aa11.77□□□□□ -0.53
DDB1-202ENST00000414411 DDTLA6NHG4 134 aaPredicted RBP11.76□□□□□ -0.53
DDB1-202ENST00000414411 CYP21A2P08686 494 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 TNFAIP1Q13829 316 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 C12orf60Q5U649 245 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
DDB1-202ENST00000414411 TMX3Q96JJ7 454 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 TEPSINQ96N21 525 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 DEFB129Q9H1M3 183 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
DDB1-202ENST00000414411 COL2A1P02458 1487 aaPredicted RBP11.76□□□□□ -0.53
DDB1-202ENST00000414411 NAV1Q8NEY1 1877 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 CYP2D7A0A087X1C5 515 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 SMIM22K7EJ46 135 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 TDO2P48775 406 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 PLCD1P51178 756 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 EVX2Q03828 476 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 PKP1Q13835 747 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 RASA3Q14644 834 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 APOBEC3FQ8IUX4 373 aaKnown RBP11.76□□□□□ -0.53
DDB1-202ENST00000414411 NBPF3Q9H094 633 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
DDB1-202ENST00000414411 ARPP21Q9UBL0 812 aaPredicted RBP11.76□□□□□ -0.53
DDB1-202ENST00000414411 SAP30BPQ9UHR5 308 aaKnown RBP11.76□□□□□ -0.53
DDB1-202ENST00000414411 ANAPC4Q9UJX5 808 aa11.76□□□□□ -0.53
DDB1-202ENST00000414411 ISY1Q9ULR0 285 aaKnown RBP11.76□□□□□ -0.53
DDB1-202ENST00000414411 CYP2D6P10635 497 aa11.75□□□□□ -0.53
DDB1-202ENST00000414411 TNNI2P48788 182 aa11.75□□□□□ -0.53
DDB1-202ENST00000414411 CUL4AQ13619 759 aa11.75□□□□□ -0.53
DDB1-202ENST00000414411 TSGA10IPQ3SY00 556 aa11.75□□□□□ -0.53
DDB1-202ENST00000414411 EAPPQ56P03 285 aaPredicted RBP11.75□□□□□ -0.53
DDB1-202ENST00000414411 CREB3L3Q68CJ9 461 aa11.75□□□□□ -0.53
DDB1-202ENST00000414411 METTL16Q86W50 562 aaKnown RBP11.75□□□□□ -0.53
DDB1-202ENST00000414411 DCPSQ96C86 337 aaKnown RBP11.75□□□□□ -0.53
DDB1-202ENST00000414411 TMEM39BQ9GZU3 492 aa11.75□□□□□ -0.53
DDB1-202ENST00000414411 TAF6LQ9Y6J9 622 aa11.75□□□□□ -0.53
DDB1-202ENST00000414411 ZNF213O14771 459 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 SLC27A2O14975 620 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 FGRP09769 529 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 XRCC6P12956 609 aaKnown RBP eCLIP11.74□□□□□ -0.53
DDB1-202ENST00000414411 PPARAQ07869 468 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 TTC6Q86TZ1 520 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 CDAN1Q8IWY9 1227 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 TACC3Q9Y6A5 838 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 MINDY4BA8MYZ0 360 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 POLR3DP05423 398 aaPredicted RBP11.74□□□□□ -0.53
DDB1-202ENST00000414411 HAND2P61296 217 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 MAP3K10Q02779 954 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 GABPAQ06546 454 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
DDB1-202ENST00000414411 EHD4Q9H223 541 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 PI4KBQ9UBF8 816 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
DDB1-202ENST00000414411 SIPA1L1O43166 1804 aa11.73□□□□□ -0.53
DDB1-202ENST00000414411 LAMA4Q16363 1823 aa11.73□□□□□ -0.53
DDB1-202ENST00000414411 ROBO3Q96MS0 1386 aa11.73□□□□□ -0.53
DDB1-202ENST00000414411 MRE11P49959 708 aa11.73□□□□□ -0.53
DDB1-202ENST00000414411 KLHL40Q2TBA0 621 aa11.73□□□□□ -0.53
DDB1-202ENST00000414411 CDC37L1Q7L3B6 337 aa11.73□□□□□ -0.53
DDB1-202ENST00000414411 KRT26Q7Z3Y9 468 aa11.73□□□□□ -0.53
DDB1-202ENST00000414411 LDHDQ86WU2 507 aa11.73□□□□□ -0.53
DDB1-202ENST00000414411 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
DDB1-202ENST00000414411 INTS4Q96HW7 963 aaKnown RBP11.73□□□□□ -0.53
DDB1-202ENST00000414411 UPF3BQ9BZI7 483 aaKnown RBP11.73□□□□□ -0.53
DDB1-202ENST00000414411 GPBP1L1Q9HC44 474 aaPredicted RBP11.73□□□□□ -0.53
DDB1-202ENST00000414411 ZDHHC9Q9Y397 364 aa11.73□□□□□ -0.53
DDB1-202ENST00000414411 KIF3CO14782 793 aa11.72□□□□□ -0.53
DDB1-202ENST00000414411 BRD2P25440 801 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms