RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.94
UBE2F-204ENST00000409953 POLR3GLQ9BT43 218 aa9.21□□□□□ -0.94
UBE2F-204ENST00000409953 OCEL1Q9H607 264 aa9.21□□□□□ -0.94
UBE2F-204ENST00000409953 RPAP1Q9BWH6 1393 aaPredicted RBP9.21□□□□□ -0.94
UBE2F-204ENST00000409953 CFAP47Q6ZTR5 3102 aa9.2□□□□□ -0.94
UBE2F-204ENST00000409953 PRRC2BQ5JSZ5 2229 aaKnown RBP9.2□□□□□ -0.94
UBE2F-204ENST00000409953 C7P10643 843 aa9.2□□□□□ -0.94
UBE2F-204ENST00000409953 SSTR3P32745 418 aaPredicted RBP9.2□□□□□ -0.94
UBE2F-204ENST00000409953 CCDC152Q4G0S7 254 aa9.2□□□□□ -0.94
UBE2F-204ENST00000409953 GADL1Q6ZQY3 521 aa9.2□□□□□ -0.94
UBE2F-204ENST00000409953 PDCD7Q8N8D1 485 aaKnown RBP9.2□□□□□ -0.94
UBE2F-204ENST00000409953 SLC39A7Q92504 469 aa9.2□□□□□ -0.94
UBE2F-204ENST00000409953 MFSD14AQ96MC6 490 aa9.2□□□□□ -0.94
UBE2F-204ENST00000409953 NKX2-4Q9H2Z4 354 aa9.2□□□□□ -0.94
UBE2F-204ENST00000409953 FAM86C1Q9NVL1 165 aa9.2□□□□□ -0.94
UBE2F-204ENST00000409953 A0A0G2JMZ2 1700 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 DNM1LO00429 736 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 DCXO43602 365 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 ZKSCAN1P17029 563 aaPredicted RBP9.19□□□□□ -0.94
UBE2F-204ENST00000409953 PRKAR2BP31323 418 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 RAB30Q15771 203 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 DCAF15Q66K64 600 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 SLC39A5Q6ZMH5 540 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 FASTKD5Q7L8L6 764 aaKnown RBP9.19□□□□□ -0.94
UBE2F-204ENST00000409953 HLA-CQ95604 372 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 SLC28A3Q9HAS3 691 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 MSRAQ9UJ68 235 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 MINPP1Q9UNW1 487 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 SLC45A1Q9Y2W3 748 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 RLFQ13129 1914 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 ACACBO00763 2458 aa9.19□□□□□ -0.94
UBE2F-204ENST00000409953 RIF1Q5UIP0 2472 aaKnown RBP9.19□□□□□ -0.94
UBE2F-204ENST00000409953 ATP5J2-PTCD1G3V325 749 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 CXCL11O14625 94 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 PLXNB2O15031 1838 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 CACNA1HO95180 2353 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 RAG1P15918 1043 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 EIF2S2P20042 333 aaKnown RBP9.18□□□□□ -0.94
UBE2F-204ENST00000409953 TCF15Q12870 199 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 ACAP1Q15027 740 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 SNX17Q15036 470 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 HOOK2Q96ED9 719 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.18□□□□□ -0.941e-8■■■■■ 36.4
UBE2F-204ENST00000409953 ISCA1Q9BUE6 129 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 ZNF341Q9BYN7 854 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 PANK3Q9H999 370 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 CD209Q9NNX6 404 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 DAGLAQ9Y4D2 1042 aa9.18□□□□□ -0.94
UBE2F-204ENST00000409953 A0A0G2JLL6 359 aaPredicted RBP9.17□□□□□ -0.94
UBE2F-204ENST00000409953 CACNB3P54284 484 aa9.17□□□□□ -0.94
UBE2F-204ENST00000409953 MIGA2Q7L4E1 593 aa9.17□□□□□ -0.94
UBE2F-204ENST00000409953 PRRT2Q7Z6L0 340 aaPredicted RBP9.17□□□□□ -0.94
UBE2F-204ENST00000409953 FAM178BQ8IXR5 827 aa9.17□□□□□ -0.94
UBE2F-204ENST00000409953 DZIP1LQ8IYY4 767 aaKnown RBP9.17□□□□□ -0.94
UBE2F-204ENST00000409953 PNISRQ8TF01 805 aaKnown RBP9.17□□□□□ -0.94
UBE2F-204ENST00000409953 JAG2Q9Y219 1238 aa9.17□□□□□ -0.94
UBE2F-204ENST00000409953 LEMD3Q9Y2U8 911 aa9.17□□□□□ -0.94
UBE2F-204ENST00000409953 MTCH2Q9Y6C9 303 aa9.17□□□□□ -0.94
UBE2F-204ENST00000409953 FAM186AA6NE01 2351 aa9.17□□□□□ -0.94
UBE2F-204ENST00000409953 ANKRD11Q6UB99 2663 aaPredicted RBP9.17□□□□□ -0.94
UBE2F-204ENST00000409953 MYBBP1AQ9BQG0 1328 aaKnown RBP9.16□□□□□ -0.94
UBE2F-204ENST00000409953 XRCC5P13010 732 aaKnown RBP9.16□□□□□ -0.94
UBE2F-204ENST00000409953 FKBP1AP62942 108 aaKnown RBP9.16□□□□□ -0.94
UBE2F-204ENST00000409953 GJC2Q5T442 439 aaPredicted RBP9.16□□□□□ -0.94
UBE2F-204ENST00000409953 TRMT44Q8IYL2 757 aaKnown RBP9.16□□□□□ -0.94
UBE2F-204ENST00000409953 LPAR1Q92633 364 aa9.16□□□□□ -0.94
UBE2F-204ENST00000409953 CDC5LQ99459 802 aaKnown RBP9.16□□□□□ -0.94
UBE2F-204ENST00000409953 NUDT12Q9BQG2 462 aa9.16□□□□□ -0.94
UBE2F-204ENST00000409953 SERPINA10Q9UK55 444 aa9.16□□□□□ -0.94
UBE2F-204ENST00000409953 YBX2Q9Y2T7 364 aaKnown RBP9.16□□□□□ -0.94
UBE2F-204ENST00000409953 TACC3Q9Y6A5 838 aa9.16□□□□□ -0.94
UBE2F-204ENST00000409953 FASNP49327 2511 aaKnown RBP9.15□□□□□ -0.94
UBE2F-204ENST00000409953 ATRNL1Q5VV63 1379 aa9.15□□□□□ -0.94
UBE2F-204ENST00000409953 SPEF2Q9C093 1822 aa9.15□□□□□ -0.94
UBE2F-204ENST00000409953 SOWAHBA6NEL2 793 aa9.15□□□□□ -0.94
UBE2F-204ENST00000409953 CLTBP09497 229 aa9.15□□□□□ -0.94
UBE2F-204ENST00000409953 HSP90B1P14625 803 aaKnown RBP9.15□□□□□ -0.94
UBE2F-204ENST00000409953 TLE2Q04725 743 aa9.15□□□□□ -0.94
UBE2F-204ENST00000409953 CCL14Q16627 93 aa9.15□□□□□ -0.94
UBE2F-204ENST00000409953 NOL9Q5SY16 702 aaKnown RBP9.15□□□□□ -0.94
UBE2F-204ENST00000409953 SOCS4Q8WXH5 440 aa9.15□□□□□ -0.94
UBE2F-204ENST00000409953 PRRX2Q99811 253 aa9.15□□□□□ -0.94
UBE2F-204ENST00000409953 TMEM121BQ9BXQ6 578 aaPredicted RBP9.15□□□□□ -0.94
UBE2F-204ENST00000409953 DDX20Q9UHI6 824 aaKnown RBP9.15□□□□□ -0.94
UBE2F-204ENST00000409953 MYO15AQ9UKN7 3530 aa9.15□□□□□ -0.95
UBE2F-204ENST00000409953 BRWD1Q9NSI6 2320 aa9.15□□□□□ -0.95
UBE2F-204ENST00000409953 POTEB3A0JP26 581 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 KBTBD13C9JR72 458 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 KIAA0355O15063 1070 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 HTATSF1O43719 755 aaKnown RBP9.14□□□□□ -0.95
UBE2F-204ENST00000409953 MSCO60682 206 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 PLCG2P16885 1265 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 RASIP1Q5U651 963 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 PPP2R2DQ66LE6 453 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 KRT40Q6A162 431 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 POTEBQ6S5H4 581 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 RSPH6AQ9H0K4 717 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 ZNF112Q9UJU3 913 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 PNMA3Q9UL41 463 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 TTF2Q9UNY4 1162 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms