RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 OTOP1Q7RTM1 612 aa21.81■■□□□ 1.08
ITM2C-204ENST00000409704 ANKRD23Q86SG2 305 aa21.81■■□□□ 1.08
ITM2C-204ENST00000409704 CERS3Q8IU89 383 aa21.81■■□□□ 1.08
ITM2C-204ENST00000409704 MIGA1Q8NAN2 632 aa21.81■■□□□ 1.08
ITM2C-204ENST00000409704 LRRCC1Q9C099 1032 aa21.81■■□□□ 1.08
ITM2C-204ENST00000409704 BCL11AQ9H165 835 aa21.81■■□□□ 1.08
ITM2C-204ENST00000409704 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.81■■□□□ 1.08
ITM2C-204ENST00000409704 CXCL11O14625 94 aa21.8■■□□□ 1.08
ITM2C-204ENST00000409704 SP3Q02447 781 aa21.8■■□□□ 1.08
ITM2C-204ENST00000409704 DNAJC2Q99543 621 aaKnown RBP21.8■■□□□ 1.08
ITM2C-204ENST00000409704 DHX36Q9H2U1 1008 aaKnown RBP21.8■■□□□ 1.08
ITM2C-204ENST00000409704 HERC5Q9UII4 1024 aaKnown RBP21.8■■□□□ 1.08
ITM2C-204ENST00000409704 TRIM17Q9Y577 477 aa21.8■■□□□ 1.08
ITM2C-204ENST00000409704 A0A0G2JLL6 359 aaPredicted RBP21.79■■□□□ 1.08
ITM2C-204ENST00000409704 GOLIM4O00461 696 aa21.79■■□□□ 1.08
ITM2C-204ENST00000409704 TLR2O60603 784 aa21.79■■□□□ 1.08
ITM2C-204ENST00000409704 PRRT2Q7Z6L0 340 aaPredicted RBP21.79■■□□□ 1.08
ITM2C-204ENST00000409704 AFG3L2Q9Y4W6 797 aa21.79■■□□□ 1.08
ITM2C-204ENST00000409704 ZHX2Q9Y6X8 837 aa21.79■■□□□ 1.08
ITM2C-204ENST00000409704 ADGRA2Q96PE1 1338 aa21.79■■□□□ 1.08
ITM2C-204ENST00000409704 CAP1Q01518 475 aa21.78■■□□□ 1.08
ITM2C-204ENST00000409704 CCDC84Q86UT8 332 aaPredicted RBP21.78■■□□□ 1.08
ITM2C-204ENST00000409704 EDC3Q96F86 508 aaKnown RBP21.78■■□□□ 1.08
ITM2C-204ENST00000409704 DNAJC18Q9H819 358 aa21.78■■□□□ 1.08
ITM2C-204ENST00000409704 PI4KBQ9UBF8 816 aa21.78■■□□□ 1.08
ITM2C-204ENST00000409704 PDHXO00330 501 aa21.77■■□□□ 1.08
ITM2C-204ENST00000409704 SMARCA5O60264 1052 aaPredicted RBP21.77■■□□□ 1.08
ITM2C-204ENST00000409704 PDE6AP16499 860 aa21.77■■□□□ 1.08
ITM2C-204ENST00000409704 ATP5JP18859 108 aa21.77■■□□□ 1.08
ITM2C-204ENST00000409704 SAP30BPQ9UHR5 308 aaKnown RBP21.77■■□□□ 1.08
ITM2C-204ENST00000409704 PALD1Q9ULE6 856 aa21.77■■□□□ 1.08
ITM2C-204ENST00000409704 RRP1BQ14684 758 aaKnown RBP21.76■■□□□ 1.07
ITM2C-204ENST00000409704 GPAT2Q6NUI2 795 aa21.76■■□□□ 1.07
ITM2C-204ENST00000409704 METTL16Q86W50 562 aaKnown RBP21.76■■□□□ 1.07
ITM2C-204ENST00000409704 RIOK1Q9BRS2 568 aaKnown RBP21.76■■□□□ 1.07
ITM2C-204ENST00000409704 BOLA2Q9H3K6 86 aa21.76■■□□□ 1.07
ITM2C-204ENST00000409704 PAG1Q9NWQ8 432 aa21.76■■□□□ 1.07
ITM2C-204ENST00000409704 TRIM75PA6NK02 468 aa21.75■■□□□ 1.07
ITM2C-204ENST00000409704 HLA-DOAP06340 250 aa21.75■■□□□ 1.07
ITM2C-204ENST00000409704 CAP2P40123 477 aa21.75■■□□□ 1.07
ITM2C-204ENST00000409704 USP5P45974 858 aa21.75■■□□□ 1.07
ITM2C-204ENST00000409704 SLC9C2Q5TAH2 1124 aa21.75■■□□□ 1.07
ITM2C-204ENST00000409704 PARK7Q99497 189 aaKnown RBP21.75■■□□□ 1.07
ITM2C-204ENST00000409704 HAUS7Q99871 368 aa21.75■■□□□ 1.07
ITM2C-204ENST00000409704 DCTPP1Q9H773 170 aa21.75■■□□□ 1.07
ITM2C-204ENST00000409704 EFCC1Q9HA90 598 aa21.75■■□□□ 1.07
ITM2C-204ENST00000409704 RBBP6Q7Z6E9 1792 aaKnown RBP21.74■■□□□ 1.07
ITM2C-204ENST00000409704 TCRBV5S4A2TA0A5A2 114 aa21.74■■□□□ 1.07
ITM2C-204ENST00000409704 SLC4A8Q2Y0W8 1093 aa21.74■■□□□ 1.07
ITM2C-204ENST00000409704 GADL1Q6ZQY3 521 aa21.74■■□□□ 1.07
ITM2C-204ENST00000409704 FASTKD5Q7L8L6 764 aaKnown RBP21.74■■□□□ 1.07
ITM2C-204ENST00000409704 CRACR2BQ8N4Y2 399 aaPredicted RBP21.74■■□□□ 1.07
ITM2C-204ENST00000409704 TRIM34Q9BYJ4 488 aa21.74■■□□□ 1.07
ITM2C-204ENST00000409704 TBC1D2Q9BYX2 928 aa21.74■■□□□ 1.07
ITM2C-204ENST00000409704 PCDHB15Q9Y5E8 787 aa21.74■■□□□ 1.07
ITM2C-204ENST00000409704 ZNF532Q9HCE3 1301 aa21.74■■□□□ 1.07
ITM2C-204ENST00000409704 MGAMO43451 1857 aa21.73■■□□□ 1.07
ITM2C-204ENST00000409704 MAGEB6P1A0A0J9YX57 407 aa21.73■■□□□ 1.07
ITM2C-204ENST00000409704 RGS19P49795 217 aa21.73■■□□□ 1.07
ITM2C-204ENST00000409704 SOX10P56693 466 aa21.73■■□□□ 1.07
ITM2C-204ENST00000409704 C17orf99Q6UX52 265 aa21.73■■□□□ 1.07
ITM2C-204ENST00000409704 LACTBP83111 547 aaPredicted RBP21.72■■□□□ 1.07
ITM2C-204ENST00000409704 FOXP4Q8IVH2 680 aaPredicted RBP21.72■■□□□ 1.07
ITM2C-204ENST00000409704 CRBNQ96SW2 442 aa21.72■■□□□ 1.07
ITM2C-204ENST00000409704 CPA4Q9UI42 421 aa21.72■■□□□ 1.07
ITM2C-204ENST00000409704 PTPN22Q9Y2R2 807 aa21.72■■□□□ 1.07
ITM2C-204ENST00000409704 SLC45A1Q9Y2W3 748 aa21.72■■□□□ 1.07
ITM2C-204ENST00000409704 USP17L5A8MUK1 530 aa21.71■■□□□ 1.07
ITM2C-204ENST00000409704 ADD2P35612 726 aa21.71■■□□□ 1.07
ITM2C-204ENST00000409704 ZNF280CQ8ND82 737 aa21.71■■□□□ 1.07
ITM2C-204ENST00000409704 ARHGAP39Q9C0H5 1083 aa21.71■■□□□ 1.07
ITM2C-204ENST00000409704 EHD4Q9H223 541 aa21.71■■□□□ 1.07
ITM2C-204ENST00000409704 AGTPBP1Q9UPW5 1226 aa21.71■■□□□ 1.07
ITM2C-204ENST00000409704 MYH8P13535 1937 aa21.7■■□□□ 1.07
ITM2C-204ENST00000409704 GDF11O95390 407 aa21.7■■□□□ 1.06
ITM2C-204ENST00000409704 ASNSP08243 561 aa21.7■■□□□ 1.06
ITM2C-204ENST00000409704 CYP2C8P10632 490 aa21.7■■□□□ 1.06
ITM2C-204ENST00000409704 ARHGEF6Q15052 776 aa21.7■■□□□ 1.06
ITM2C-204ENST00000409704 SHROOM1Q2M3G4 852 aaPredicted RBP21.7■■□□□ 1.06
ITM2C-204ENST00000409704 LCORLQ8N3X6 602 aa21.7■■□□□ 1.06
ITM2C-204ENST00000409704 CRNKL1Q9BZJ0 848 aaKnown RBP21.7■■□□□ 1.06
ITM2C-204ENST00000409704 AS3MTQ9HBK9 375 aa21.7■■□□□ 1.06
ITM2C-204ENST00000409704 ECHDC1Q9NTX5 307 aa21.7■■□□□ 1.06
ITM2C-204ENST00000409704 BAZ2AQ9UIF9 1905 aaKnown RBP21.7■■□□□ 1.06
ITM2C-204ENST00000409704 CENPFP49454 3210 aa21.7■■□□□ 1.06
ITM2C-204ENST00000409704 JAG1P78504 1218 aa21.69■■□□□ 1.06
ITM2C-204ENST00000409704 SPP2Q13103 211 aa21.69■■□□□ 1.06
ITM2C-204ENST00000409704 KIF22Q14807 665 aa21.69■■□□□ 1.06
ITM2C-204ENST00000409704 PROCA1Q8NCQ7 364 aaPredicted RBP21.69■■□□□ 1.06
ITM2C-204ENST00000409704 GPATCH3Q96I76 525 aa21.69■■□□□ 1.06
ITM2C-204ENST00000409704 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.69■■□□□ 1.06
ITM2C-204ENST00000409704 GINM1Q9NU53 330 aa21.69■■□□□ 1.06
ITM2C-204ENST00000409704 ZBTB21Q9ULJ3 1066 aa21.69■■□□□ 1.06
ITM2C-204ENST00000409704 BCRP11274 1271 aa21.68■■□□□ 1.06
ITM2C-204ENST00000409704 SLFNL1Q499Z3 407 aa21.68■■□□□ 1.06
ITM2C-204ENST00000409704 TREML2Q5T2D2 321 aa21.68■■□□□ 1.06
ITM2C-204ENST00000409704 SERPINB13Q9UIV8 391 aa21.68■■□□□ 1.06
ITM2C-204ENST00000409704 HMGCS2P54868 508 aa21.67■■□□□ 1.06
ITM2C-204ENST00000409704 MLLT1Q03111 559 aaPredicted RBP21.67■■□□□ 1.06
ITM2C-204ENST00000409704 SH3D19Q5HYK7 790 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms