RNA–Protein interactions for RNA: ENST00000408671.3

MIR1249-201, Transcript of microRNA 1249, humanhuman

BASIC

Gene MIR1249, Length 66 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR1249-201ENST00000408671 GAKO14976 1311 aa14.21□□□□□ -0.13
MIR1249-201ENST00000408671 IFIT1P09914 478 aaKnown RBP14.21□□□□□ -0.13
MIR1249-201ENST00000408671 NBPF7P0C2Y1 421 aaPredicted RBP14.21□□□□□ -0.13
MIR1249-201ENST00000408671 PLA2G5P39877 138 aa14.21□□□□□ -0.13
MIR1249-201ENST00000408671 CACNB2Q08289 660 aaPredicted RBP14.21□□□□□ -0.13
MIR1249-201ENST00000408671 WWC1Q8IX03 1113 aa14.21□□□□□ -0.13
MIR1249-201ENST00000408671 USP6NLQ92738 828 aa14.21□□□□□ -0.13
MIR1249-201ENST00000408671 ASCC2Q9H1I8 757 aaPredicted RBP14.21□□□□□ -0.13
MIR1249-201ENST00000408671 FANCIQ9NVI1 1328 aa14.2□□□□□ -0.14
MIR1249-201ENST00000408671 TNFRSF10AO00220 468 aa14.2□□□□□ -0.14
MIR1249-201ENST00000408671 TBC1D12O60347 775 aa14.2□□□□□ -0.14
MIR1249-201ENST00000408671 CCND3P30281 292 aaPredicted RBP14.2□□□□□ -0.14
MIR1249-201ENST00000408671 SMAD3P84022 425 aaKnown RBP14.2□□□□□ -0.14
MIR1249-201ENST00000408671 PABPC4Q13310 644 aaKnown RBP eCLIP14.2□□□□□ -0.14
MIR1249-201ENST00000408671 TJAP1Q5JTD0 557 aa14.2□□□□□ -0.14
MIR1249-201ENST00000408671 TRMT44Q8IYL2 757 aaKnown RBP14.2□□□□□ -0.14
MIR1249-201ENST00000408671 ANKRD44Q8N8A2 993 aa14.2□□□□□ -0.14
MIR1249-201ENST00000408671 NUDT12Q9BQG2 462 aa14.2□□□□□ -0.14
MIR1249-201ENST00000408671 BICC1Q9H694 974 aaKnown RBP14.2□□□□□ -0.14
MIR1249-201ENST00000408671 RAPGEFL1Q9UHV5 662 aa14.2□□□□□ -0.14
MIR1249-201ENST00000408671 SIPA1L1O43166 1804 aa14.2□□□□□ -0.14
MIR1249-201ENST00000408671 BDP1A6H8Y1 2624 aa14.19□□□□□ -0.14
MIR1249-201ENST00000408671 ZBTB22O15209 634 aa14.19□□□□□ -0.14
MIR1249-201ENST00000408671 LDHBP07195 334 aaKnown RBP14.19□□□□□ -0.14
MIR1249-201ENST00000408671 FOSL2P15408 326 aa14.19□□□□□ -0.14
MIR1249-201ENST00000408671 ZKSCAN1P17029 563 aaPredicted RBP14.19□□□□□ -0.14
MIR1249-201ENST00000408671 SPP2Q13103 211 aa14.19□□□□□ -0.14
MIR1249-201ENST00000408671 SHHQ15465 462 aa14.19□□□□□ -0.14
MIR1249-201ENST00000408671 SH3D19Q5HYK7 790 aa14.19□□□□□ -0.14
MIR1249-201ENST00000408671 C9orf50Q5SZB4 431 aa14.19□□□□□ -0.14
MIR1249-201ENST00000408671 ZNF280CQ8ND82 737 aa14.19□□□□□ -0.14
MIR1249-201ENST00000408671 TBC1D2Q9BYX2 928 aa14.19□□□□□ -0.14
MIR1249-201ENST00000408671 DDX4Q9NQI0 724 aaKnown RBP14.19□□□□□ -0.14
MIR1249-201ENST00000408671 TMEM265A0A087WTH1 108 aa14.18□□□□□ -0.14
MIR1249-201ENST00000408671 ZEB1P37275 1124 aaPredicted RBP14.18□□□□□ -0.14
MIR1249-201ENST00000408671 HMGCS2P54868 508 aa14.18□□□□□ -0.14
MIR1249-201ENST00000408671 KLHDC4Q8TBB5 520 aa14.18□□□□□ -0.14
MIR1249-201ENST00000408671 SRCIN1Q9C0H9 1055 aa14.18□□□□□ -0.14
MIR1249-201ENST00000408671 OSBPL5Q9H0X9 879 aaPredicted RBP14.18□□□□□ -0.14
MIR1249-201ENST00000408671 CCL14Q16627 93 aa14.17□□□□□ -0.14
MIR1249-201ENST00000408671 MORN1Q5T089 497 aa14.17□□□□□ -0.14
MIR1249-201ENST00000408671 ZSCAN29Q8IWY8 852 aaPredicted RBP14.17□□□□□ -0.14
MIR1249-201ENST00000408671 USP38Q8NB14 1042 aa14.17□□□□□ -0.14
MIR1249-201ENST00000408671 LPIN2Q92539 896 aa14.17□□□□□ -0.14
MIR1249-201ENST00000408671 SENP6Q9GZR1 1112 aaPredicted RBP14.17□□□□□ -0.14
MIR1249-201ENST00000408671 TXNRD2Q9NNW7 524 aa14.17□□□□□ -0.14
MIR1249-201ENST00000408671 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
MIR1249-201ENST00000408671 SLC5A1P13866 664 aa14.16□□□□□ -0.14
MIR1249-201ENST00000408671 HOXA7P31268 230 aaPredicted RBP14.16□□□□□ -0.14
MIR1249-201ENST00000408671 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
MIR1249-201ENST00000408671 FAM163AQ96GL9 167 aaPredicted RBP14.16□□□□□ -0.14
MIR1249-201ENST00000408671 APBA2Q99767 749 aa14.16□□□□□ -0.14
MIR1249-201ENST00000408671 PRKRIP1Q9H875 184 aaPredicted RBP14.16□□□□□ -0.14
MIR1249-201ENST00000408671 DNM1LO00429 736 aa14.15□□□□□ -0.14
MIR1249-201ENST00000408671 PEX10O60683 326 aa14.15□□□□□ -0.14
MIR1249-201ENST00000408671 MAPK4P31152 587 aa14.15□□□□□ -0.14
MIR1249-201ENST00000408671 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
MIR1249-201ENST00000408671 RGS2P41220 211 aa14.15□□□□□ -0.14
MIR1249-201ENST00000408671 RTP1P59025 263 aa14.15□□□□□ -0.14
MIR1249-201ENST00000408671 GPRC5AQ8NFJ5 357 aa14.15□□□□□ -0.14
MIR1249-201ENST00000408671 PRKAG2Q9UGJ0 569 aa14.15□□□□□ -0.14
MIR1249-201ENST00000408671 CDK5RAP2Q96SN8 1893 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 FAM196BA6NMK8 535 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 SEMA3EO15041 775 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 CAP2P40123 477 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 HERVK_113P62684 666 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 EXOSC9Q06265 439 aaKnown RBP14.14□□□□□ -0.15
MIR1249-201ENST00000408671 PDE3AQ14432 1141 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 RRP1BQ14684 758 aaKnown RBP14.14□□□□□ -0.15
MIR1249-201ENST00000408671 SNX17Q15036 470 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 SLC4A10Q6U841 1118 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 GPR142Q7Z601 462 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 LPAR1Q92633 364 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 FAM122AQ96E09 287 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 P2RX7Q99572 595 aaKnown RBP14.14□□□□□ -0.15
MIR1249-201ENST00000408671 PORCNQ9H237 461 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 RBPJLQ9UBG7 517 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 DENND2AQ9ULE3 1009 aa14.14□□□□□ -0.15
MIR1249-201ENST00000408671 CHD9Q3L8U1 2897 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 MYO9BQ13459 2157 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 USP17L5A8MUK1 530 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 EYA2O00167 538 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 MSCO60682 206 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 RFX5P48382 616 aaPredicted RBP14.13□□□□□ -0.15
MIR1249-201ENST00000408671 ATN1P54259 1190 aaPredicted RBP14.13□□□□□ -0.15
MIR1249-201ENST00000408671 RHBDL3P58872 404 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 ERVK-9P63128 1117 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 ERVK-24P63145 666 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 IRX3P78415 501 aaPredicted RBP14.13□□□□□ -0.15
MIR1249-201ENST00000408671 PICALMQ13492 652 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 POTEEQ6S8J3 1075 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 WDR18Q9BV38 432 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.13□□□□□ -0.15
MIR1249-201ENST00000408671 DDX20Q9UHI6 824 aaKnown RBP14.13□□□□□ -0.15
MIR1249-201ENST00000408671 REV3LO60673 3130 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 FOCADQ5VW36 1801 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 ZNF236Q9UL36 1845 aa14.13□□□□□ -0.15
MIR1249-201ENST00000408671 IGHA2P01877 340 aa14.12□□□□□ -0.15
MIR1249-201ENST00000408671 BTDP43251 543 aa14.12□□□□□ -0.15
MIR1249-201ENST00000408671 BACE1P56817 501 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms